Monoclonal antibodies
The invention provides heterochimeric antibodies and/or fragments thereof comprising (i) hypervariable region sequences wholly or substantially corresponding to sequences found in antibodies from a donor species; (ii) constant region sequences wholly or substantially corresponding to sequences found in antibodies from a target species which is different from the donor species; and (iii) heavy and/or light chain variable framework sequences which contain at least three non-CDR residues corresponding to sequences found in antibodies from a target species and at least three contiguous non-CDR residues corresponding to sequences found in antibodies from a donor species. The invention further provides antibody to canine or feline or equine antigens, e.g., CD20 or CD52, and methods of making and using antibodies as described.
1. A heterochimeric antibody, or fragment thereof, comprising, amino acid sequences of antibodies from a donor species of mammal and from a target species of mammal, wherein the donor species and the target species are different, comprising:
a) a constant region sequence from a heavy chain and/or light chain identical to, or a conservative variant of, a sequence from the target species; and
b) a variable domain sequence from a heavy chain and/or light chain, wherein said variable domain sequence comprises:
i.) hypervariable region sequences comprising three complementarity determining regions (CDRs) as defined by Kabat, which are identical to, or a conservative variant of, CDRs from the donor species, and
ii.) FR1, FR2, FR3, and FR4 framework sequences, wherein the FR1 and/or the FR4 sequence is identical to, or a conservative variant of, a FR1 and/or FR4 sequence from the target species, and the FR2 and FR3 sequences are identical to, or a conservative variant of, FR2 and FR3 sequences from the donor species;
wherein said variable domain sequence comprises at least three contiguous non-CDR residues corresponding to residues from the target species and at least three contiguous non-CDR residues corresponding to residues from the donor species,
wherein the heterochimeric antibody or fragment thereof, comprises a heavy chain and a light chain, and the CDRs are from the same donor antibody.
2. The heterochimeric antibody of claim 1 , wherein the donor is a mouse.
3. The heterochimeric antibody of claim 1 , wherein the target is a companion animal.
4. The heterochimeric antibody of claim 3 , wherein the companion animal is a dog, a cat or a horse.
5. The heterochimeric antibody of claim 3 , wherein the heavy and/or light chain variable domain sequence comprises at least four contiguous non-CDR residues corresponding to residues found in antibodies from the target species.
6. The heterochimeric antibody of claim 3 , wherein the heavy and/or light chain variable domain sequence comprises at least four contiguous non-CDR residues corresponding to residues found in antibodies from the donor species.
7. The heterochimeric antibody of claim 1 , wherein the antibody binds to canine, feline or equine CD20.
8. The heterochimeric antibody of claim 7 , wherein the antibody binds to an epitope on the extracellular loop of canine CD20.
9. The heterochimeric antibody of claim 1 , wherein the antibody binds to canine, feline or equine CD52.
10. The heterochimeric antibody of claim 9 , wherein the antibody binds to an epitope on the extracellular loop of canine CD52.
11. The heterochimeric antibody of claim 9 , wherein said antibody binds to a canine CD52 antigen, wherein said canine CD52 antigen has an amino acid sequence according to SEQ ID NO: 72.
12. The heterochimeric antibody of claim 9 , wherein said antibody binds to a feline CD52 antigen, wherein said feline CD52 antigen has an amino acid sequence according to SEQ ID NO: 73.
13. The heterochimeric antibody of claim 1 , wherein the heterochimeric antibody comprises a light chain selected from the group consisting of:
FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4 T-Lambda -C T-Lambda ;
FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4 T-Kappa -C T-Lambda ,
FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4 T-Lambda -C T-Kappa ;
FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4 T-kappa -C T-Kappa ;
FR1 T-Kappa -CDR1-FR2-CDR2-FR3-CDR3-FR4-C T-Lambda ;
FR1 T-Lamba -CDR1-FR2-CDR2-FR3-CDR3-FR4-C T-Lambda ;
FR1 T-Lambda-CD R1-FR2-CDR2-FR3-CDR3-FR4-C T-Kappa ;
FR1 T-kappa-CDR 1-FR2-CDR2-FR3-CDR3-FR4-C T-Kappa ;
FR1 T-Lambda-CD -FR2-CDR2-FR3-CDR3-FR4 T-Lambda -C T-Lambda ; and
FR1 T-kappa -CDR1-FR2-CDR2-FR3-CDR3-FR4 T-kappa -C T-Kappa ;
wherein T=Target species; Lambda=lambda light chain; Kappa=kappa light chain; C=Constant domain; FR=Framework region; CDR=Complementarity Determining Region; and wherein a FR is a donor species unless otherwise marked as a target species.
14. The heterochimeric antibody of claim 13 , wherein said heterochimeric antibody is an anti-CD20 monoclonal antibody.
15. The heterochimeric antibody of claim 13 , wherein said heterochimeric antibody is an anti-CD52 monoclonal antibody.
16. The heterochimeric antibody of claim 1 , wherein the heterochimeric antibody comprises a heavy chain wherein said heavy chain is selected from the group consisting of:
FR1-CDR1-FR2-CDR2-FR3-CDR3-FR4 T -C T ;
FR1 T -CDR1-FR2-CDR2-FR3-CDR3-FR4-C T ; and
FR1 T -CDR1-FR2-CDR2-FR3-CDR3-FR4 T -C T ;
wherein T=Target species; Lambda=lambda light chain; Kappa=kappa light chain; C=Constant domain; FR=Framework region; CDR=Complementarity Determining Region; and wherein a FR is a donor species unless otherwise marked as a target species.
17. The heterochimeric antibody of claim 16 , wherein said heterochimeric antibody is an anti-CD20 monoclonal antibody.
18. The heterochimeric antibody of claim 16 , wherein said heterochimeric antibody is an anti-CD52 monoclonal antibody.
19. The heterochimeric antibody of claim 1 , wherein the amino acid sequence of the FR4 light chain is selected from the group consisting of: SEQ ID NO: 1; SEQ ID NO: 2; SEQ ID NO: 3; SEQ ID NO: 4; SEQ ID NO: 5; SEQ ID NO: 6; SEQ ID NO: 6; SEQ ID NO: 7; SEQ ID NO: 8; SEQ ID NO: 9; SEQ ID NO: 10; SEQ ID NO: 11; and SEQ ID NO: 12.
20. The heterochimeric antibody of claim 1 , wherein the amino acid sequence of the FR4 heavy chain is selected from the group consisting of: SEQ ID NO: 13; SEQ ID NO: 14; SEQ ID NO: 15; SEQ ID NO: 16; SEQ ID NO: 17; SEQ ID NO: 18; and SEQ ID NO:19.
21. The heterochimeric antibody of claim 1 , wherein the amino acid sequence of the FR1 light chain is selected from the group consisting of: SEQ ID NO: 20; SEQ ID NO: 21; SEQ ID NO: 22; SEQ ID NO: 23; SEQ ID NO: 24; and SEQ ID NO: 25.
22. The heterochimeric antibody of claim 1 , wherein the amino acid sequence of the FR1 heavy chain is selected from the group consisting of: SEQ ID NO: 26; SEQ ID NO: 27; SEQ ID NO: 28; SEQ ID NO: 29; SEQ ID NO: 30; SEQ ID NO: 31; SEQ ID NO: 32; SEQ ID NO: 33; SEQ ID NO: 34; SEQ ID NO: 35; SEQ ID NO: 36; SEQ ID NO: 37; SEQ ID NO: 38; SEQ ID NO: 39; and SEQ ID NO: 40.
23. The heterochimeric antibody of claim 1 , wherein said antibody comprises a light chain with an amino acid sequence selected from the group consisting of: SEQ ID NO: 41; SEQ ID NO: 42; SEQ ID NO: 43; SEQ ID NO: 44; SEQ ID NO: 45; and SEQ ID NO: 46.
24. The heterochimeric antibody of claim 1 , wherein the heterochimeric antibody is derived from a rat anti-human CD52 antibody and wherein the heterochimeric antibody comprises a sequence selected from the group consisting of:
FR1 R-VK -CDR1 R-VK -FR2 R-VK -CDR2 R-VK -FR3 R-VK -CDR3 R-VK -FR4 R-VX -C D-L ;
FR1 D-VL -CDR1 R-VK -FR2 R-VK CDR2 R-VK -FR3 R-VK -CDR3 R-VK -FR4 D-VL -C D-L ;
FR1 R-VL -CDR1 R-VK -FR2 R-VK CDR2 R-VK -FR3 R-VK -CDR3 R-VK -FR4 D-VL -C D-L ;
FR1 R-VH -CDR1 R-VH -FR2 R-VH CDR2 R-VH -FR3 R-VH -CDR3 R-VH -FR4 R-VH -C D-H ;
FR1 D-VH -CDR1 R-VH -FR2 R-VH CDR2 R-VH -FR3 R-VH -CDR3 R-VH -FR4 D-VH -C D-H ; and
FR1 R-VH -CDR1 R-VH -FR2 R-VH CDR2 R-VH -FR3 R-VH -CDR3 R-VH -FR4 D-VH -C D-H ;
wherein R: Rat; D: Dog; FR R-VK =Rat kappa light chain (LC) FR; FR D-VL =Canine lambda LC FR; CDR R-VK =Rat kappa LC CDR; CDR R-VH =CDR from a rat heavy chain (HC); CD D-L or CD D-K =Constant domain from a canine lambda or canine kappa LC; CD D-H =Constant domain from canine HC.
25. The heterochimeric antibody of claim 1 , wherein the heterochimeric antibody is derived from mouse anti-canine lymphoma mab 231 antibody and wherein the heterochimeric antibody comprises a sequence selected from the group consisting of:
FR1 M-VK -CDR1 M-VK -FR2 M-VK -CDR2 M-VK -FR3 M-VK -CDR3 M-VK FR4 M-VK -C D-L ;
FR1 M-VK -CDR1 M-VK -FR2 M-VK -CDR2 M-VK -FR3 M-VK -CDR3 M-VK -FR4 M-VK -C D-K ;
FR1 M-VK -CDR1 M-VK -FR2 M-VK -CDR2 M-VK -FR3 M-VK -CDR3 M-VK -FR4 D-VL -C D-L ;
FR1 M-VH -CDR1 M-VH -FR2 M-VH -CDR2 M-VH -FR3 M-VH -CDR3 M-VH -FR4 M-VH -C D-H ; and
FR1 M-VH -CDR1 M-VH -FR2 M-VH -CDR2 M-VH -FR3 M-VH -CDR3 M-VH -FR4 D-VH -C D-H ;
wherein M: Mouse; D: Dog; FR M-VK =Murine kappa LC FR; FR D-VL =FR Canine lambda LC FR; CDR M-VK =Murine kappa LC CDR; CDR M-VH =Murine HC CDR; CD D-L or CD D-K =Constant domain from a canine lambda or canine kappa LC; CD D-H =Constant domain from a canine HC.
26. The heterochimeric antibody of claim 25 , comprising one or more amino acid sequences selected from the group consisting of: SEQ ID NO: 47, SEQ ID NO: 48; SEQ ID NO: 49; SEQ ID NO: 50; SEQ ID NO: 51; SEQ ID NO: 52; and SEQ ID NO: 53.
27. The heterochimeric antibody of claim 1 , wherein the donor species antibody is a murine anti-canine CD20 antibody.
28. The heterochimeric antibody of claim 27 , wherein said antibody binds to a canine CD20 antigen, wherein said canine CD20 antigen has an amino acid sequence according to SEQ ID NO: 67.
29. The heterochimeric antibody of claim 28 , wherein said antibody binds to an epitope region on a canine CD20 selected from the group consisting of SEQ ID NOS 76-85.
30. The heterochimeric antibody of claim 27 , wherein said antibody binds to a feline CD20 antigen, wherein said feline CD20 antigen has an amino acid sequence according to SEQ ID NO: 69.
31. A pharmaceutical composition comprising an antibody according to claim 1 .