Bryostatin analogues and methods of making and using thereof
Described herein are tricyclic macrolactones. The macrolactones have a high binding affinity for PKC. The compounds described herein can be used in a number of therapeutic applications including cancer and Alzheimer's prevention and treatment. The compounds described herein can also treat memory loss. Also described herein are methods for producing macrolactones. The methods permit the high-yield synthesis of macrolactones in fewer steps and with a higher degree of substitution and specificity.
1. A compound comprising the formula I
wherein
R 1 is hydrogen, an alkyl group, an aryl group, a cycloalkyl group, an alkenyl, or an alkynyl group;
R 2 is an alkyl group or aryl group;
X 1 and X 2 are, independently, hydrogen, an alkyl group, a hydroxyl, or a substituted hydroxyl group;
X 3 is hydrogen, hydroxyl, an alkyl group, an alkoxy group, or a halide;
Y 1 , Y 2 , and Y 3 are, independently, hydrogen, an alkyl group, a hydroxyl group, a substituted hydroxyl group, an oxo group, a substituted or unsubstituted alkylene group, or —OC(O)R 3 , where R 3 is an alkyl group;
Z 1 and Z 2 are, independently, hydrogen, an alkyl group, a hydroxyl group, a substituted hydroxyl group, or collectively form a cycloalkyl group;
wherein when C7, C9, C13, C20, or C26 is a chiral center, the chiral center is the substantially pure enantiomer,
or the pharmaceutically acceptable salt or ester thereof, and
wherein the compound is not bryostatin 1.
2. The compound of claim 1 , wherein Y 1 and Y 2 are an unsubstituted methylene group.
3. The compound of claim 1 , wherein Y 1 is an unsubstituted methylene group and Y 2 is —OC(O)R 3 , where R 3 is an alkyl group.
4. The compound of claim 3 , wherein R 3 is a methyl group.
5. The compound of claim 1 , wherein X 1 , X 2 , Z 1 , and Z 2 are hydrogen.
6. The compound of claim 1 , wherein X 1 and X 2 are hydrogen, and Z 1 and Z 2 are methyl.
7. The compound of claim 1 , wherein X 3 is a hydroxyl group.
8. The compound of claim 1 , wherein Y 3 is hydrogen or an alkylene group comprising the formula ═C(H)CO 2 R 4 , where R 4 is an alkyl group.
9. The compound of claim 1 , wherein Y 3 is ═C(H)CO 2 Me.
10. The compound of claim 1 , wherein R 1 is a phenyl group.
11. The compound of claim 1 , wherein R 1 is a C 5 -C 10 alkyl group or a C 5 -C 10 alkenyl group.
12. The compound of claim 1 , wherein R 1 is an alkenyl group, and the alkenyl group is a conjugated diene.
13. The compound of claim 1 , wherein R 2 is a methyl group.
14. The compound of claim 1 , wherein Y 1 is methylene and Y 2 is —OC(O)Me, and the stereochemistry at C7 is substantially S.
15. The compound of claim 14 , wherein Z 1 and Z 2 are methyl, X 3 is hydroxyl, and the stereochemistry at C9 is substantially S.
16. The compound of claim 15 , wherein R 1 is a C 5 -C 10 alkyl group or a C 5 -C 10 alkenyl group.
17. The compound of claim 16 , wherein Y 3 is ═C(H)CO 2 Me.
18. The compound of claim 17 , wherein R 2 is Me and the stereochemistry at C26 is S.
19. The compound of claim 1 , wherein Y 1 and Y 2 are methylene, X 1 , X 2 , Z 1 , and Z 2 are hydrogen, and Y 3 is ═C(H)CO 2 Me.
20. The compound of claim 19 , wherein R 1 is a C 5 -C 10 alkyl group, a C 5 -C 10 alkenyl group, or a substituted or unsubstituted phenyl group.
21. The compound of claim 20 , wherein R 2 is Me and the stereochemistry at C26 is S.
22. The compound of claim 1 , wherein the compound is MERLE 21, MERLE 22, MERLE 23, MERLE 24, MERLE 25, MERLE 26, MERLE 27, or MERLE 28.
23. A method for making the compound having the formula II
comprising
(a) reacting a compound having the formula III with a compound having the formula IV to produce a pyran,
wherein R 3 is an alkyl group;
V 2 is hydrogen, an alkyl group, a hydroxyl, or a substituted hydroxyl group;
Z 1 and Z 2 are, independently, hydrogen, an alkyl group, a hydroxyl group, or a substituted hydroxyl group, or collectively form a cycloalkyl group;
P 1 , P 2 and P 3 are protecting groups;
TMS comprises a trialkylsilyl group;
wherein when carbons a and d are a chiral center, the chiral center is the substantially pure enantiomer,
wherein the stereochemistry at carbon a in formula II is the substantially pure E or Z isomer; and
(b) reacting the pyran produced in step (a) (R 4 ) 3 SiCH 2 − to produce formula II, wherein R 4 is an alkyl group.
24. A method for making a compound comprising the formula V
comprising reacting a compound having the formula II with a compound having the formula VI to produce a pyran,
wherein R 2 is an alkyl group or aryl group;
R 4 is an alkyl group;
V 1 and V 2 are, independently, hydrogen, an alkyl group, a hydroxyl, or a substituted hydroxyl group;
Z 1 and Z 2 are, independently, hydrogen, an alkyl group, a hydroxyl group, or a substituted hydroxyl group, or collectively form a cycloalkyl group;
P 2 , P 3 , P 4 , P 5 and P 6 are protecting groups;
wherein when carbon d is a chiral center, the chiral center is the substantially pure enantiomer,
wherein the stereochemistry at C26 is substantially one enantiomer, and
wherein the stereochemistry at carbons a and b in formula V are, independently, the substantially pure E or Z isomer.
25. A method for making a compound comprising the formula X
comprising reacting a compound having the formula XI with a compound having the formula XII to produce a pyran,
wherein R 2 is an alkyl group or aryl group;
X 3 is hydrogen, hydroxyl, an alkyl group, an alkoxy group, or a halide;
V 1 is hydrogen, an alkyl group, a hydroxyl, or a substituted hydroxyl group;
Y 2 is hydrogen, an alkyl group, a hydroxyl group, a substituted hydroxyl group, an oxo group, a substituted or unsubstituted alkylene group, or —OC(O)R 3 , where R 3 is an alkyl group;
Z 1 and Z 2 are, independently, hydrogen, an alkyl group, a hydroxyl group, or a substituted hydroxyl group, or collectively form a cycloalkyl group;
P 2 , P 3 , P 5 and P 6 are protecting groups;
TMS comprises a trialkylsilyl group;
wherein when carbon d is a chiral center, the chiral center is the substantially pure enantiomer,
wherein the stereochemistry at C7, C9, and C26 is substantially one enantiomer, and
wherein the stereochemistry at carbon b is substantially the pure E or Z isomer.
26. A pharmaceutical composition comprising the compound of claim 1 .
27. A method for treating or inhibiting cell proliferation comprising contacting the cells with a compound of claim 1 , wherein the cells comprise cells associated with at least one of melanoma; myeloma; chronic lymphocytic leukemia; AIDS-related lymphoma; non-Hodgkin's lymphoma; colorectal cancer; renal cancer; prostate cancer; a cancer of the head, neck, stomach, esophagus, anus or cervix; ovarian cancer; breast cancer; peritoneal cancer, or non-small cell lung cancer.
28. The method of claim 27 , wherein the cell comprises a tumor cell.
29. A method for activating protein kinase, comprising interacting the compound of claim 1 with the protein kinase.
30. The method of claim 29 , wherein the protein kinase comprises a PKC isozyme.
31. The method of claim 30 , wherein the PKC isozyme comprises PKCα.
32. A method for treating or inhibiting a disease in a subject associated with protein kinase activation, comprising administering to the subject an effective amount of a compound of claim 1 .
33. The method of claim 32 , wherein the disease comprises cancer or Alzheimer's Disease, and wherein the cancer is selected from least one of melanoma; myeloma; chronic lymphocytic leukemia; AIDS-related lymphoma; non-Hodgkin's lymphoma; colorectal cancer; renal cancer; prostate cancer; a cancer of the head, neck, stomach, esophagus, anus or cervix; ovarian cancer; breast cancer; peritoneal cancer, or non-small cell lung cancer.
34. A method for treating impaired memory comprising administering to a subject an effective amount of a compound of claim 1 .
35. A method for improving the immune system of a subject comprising administering to a subject an effective amount of a compound of claim 1 .