Counting biological agents on biological growth plates
The invention is directed to counting techniques for counting biological agents on a biological growth plate or similar medium. In order to automate the counting of biological agents, a biological growth plate is inserted into a biological scanning unit. Upon insertion of the biological growth plate, the biological scanning unit generates an image of the plate. Then, the amount of biological agents that appear in the image, such as a number of bacteria colonies, can be counted or otherwise determined using image processing and analysis routines performed either by the scanning unit or an external computing device, such as a desktop computer, workstation or the like. A variety of counting rules are described herein that can be used to improve the accuracy of automated counts of biological agents on a biological growth plate.
1. A method comprising:
receiving one or more images of a biological growth medium in a biological scanning system;
counting, in the biological scanning system, biological colonies grown on a growth area of the biological growth medium;
determining, in the biological scanning system, whether a background color value associated with shading on the growth area of the biological growth medium is within a range; and
flagging the biological growth medium for additional review by a technician if the background color value is outside the range indicating that problems may exist with respect to the biological growth medium.
2. The method of claim 1 , wherein the biological growth medium is a growth plate.
3. The method of claim 1 , wherein the background color value comprises one or more numbers defining a shade of the biological growth medium and the range is a shade range.
4. A nontransitory computer readable medium comprising computer readable instructions that when executed in a processor of a biological scanning system:
receive one or more images of a biological growth medium in the biological scanning system;
count, in the biological scanning system, biological colonies grown on a growth area of the biological growth medium;
determine, in the biological scanning system, whether a background color value associated with shading of the growth area of the biological growth medium is within a range; and
flag the biological growth medium for additional review by a technician if the background color value is outside the range indicating that problems may exist with respect to the biological growth medium.
5. The computer readable medium of claim 4 , wherein the biological growth medium is a growth plate.
6. The computer readable medium of claim 4 , wherein the background color value comprises one or more numbers defining a shade of the biological growth medium and the range is a shade range.
7. A system comprising:
an imaging device to generate one or more images of a biological growth medium; and
a processor to receive the images, count biological colonies grown on a growth area of the biological growth medium, determine whether a background color value associated with shading on the growth area of the biological growth medium is within a range, and flag the biological growth medium for additional review if the background color value is outside the range indicating that problems may exist with respect to the biological growth medium.
8. The system of claim 7 , wherein the background color value comprises one or more numbers defining a shade of the biological growth medium and the range is a shade range.