Polypeptides having acetyl xylan esterase activity and polynucleotides encoding same
The present invention relates to isolated polypeptides having acetyl xylan esterase activity and isolated polynucleotides encoding the polypeptides. The invention also relates to nucleic acid constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing and using the polypeptides.
1. An isolated polypeptide having acetyl xylan esterase activity, wherein the polypeptide (i) has at least 90% sequence identity to amino acids 34 to 308 of SEQ ID NO: 2, or (ii) is a fragment of the polypeptide of SEQ ID NO: 2.
2. The polypeptide of claim 1 , wherein the polypeptide is a polypeptide which has at least 95% sequence identity to amino acids 34 to 308 of SEQ ID NO:2.
3. The polypeptide of claim 1 , wherein the polypeptide is a polypeptide which has at least 97% sequence identity to amino acids 34 to 308 of SEQ ID NO:2.
4. The polypeptide of claim 1 , wherein the polypeptide is a polypeptide which has at least 98% sequence identity to amino acids 34 to 308 of SEQ ID NO:2.
5. The polypeptide of claim 1 , wherein the polypeptide is a polypeptide which has at least 99% sequence identity to amino acids 34 to 308 of SEQ ID NO:2.
6. The polypeptide of claim 1 , wherein the polypeptide is encoded by a polynucleotide that hybridizes under high stringency conditions with the full-length complementary strand of nucleotides 136 to 963 of the polynucleotide of SEQ ID NO: 1, wherein the high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 micrograms/ml sheared and denatured salmon sperm DNA, and 50% formamide following standard Southern blotting procedures for 12 to 24 hours, followed by washing three times each for 15 minutes using 2×SSC, 0.2% SDS at 65° C.
7. The polypeptide of claim 1 , wherein the polypeptide is encoded by a polynucleotide that hybridizes under very high stringency conditions with the full-length complementary strand of nucleotides 136 to 963 of the polynucleotide of SEQ ID NO: 1, wherein the very high stringency conditions are defined as prehybridization and hybridization at 42° C. in 5×SSPE, 0.3% SDS, 200 micrograms/ml sheared and denatured salmon sperm DNA, and 50% formamide following standard Southern blotting procedures for 12 to 24 hours, followed by washing three times each for 15 minutes using 2×SSC, 0.2% SDS at 70° C.
8. The polypeptide of claim 1 , wherein the polypeptide comprises or consists of amino acids 34 to 308 of SEQ ID NO:2.
9. The polypeptide of claim 1 , wherein the polypeptide is a fragment of the polypeptide of SEQ ID NO:2.
10. A composition comprising the polypeptide of claim 1 and one or more additional enzyme(s) selected from arabinofuranosidase, glucanase, pectinase, protease, acetyl xylan esterase, ferulic acid esterase, rhamnogalacturonase, and xylanase.
11. A composition comprising the polypeptide of claim 2 and one or more additional enzyme(s) selected from arabinofuranosidase, glucanase, pectinase, protease, acetyl xylan esterase, ferulic acid esterase, rhamnogalacturonase, and xylanase.
12. A method for degrading an acetylated xylan, comprising treating a material comprising an acetylated xylan with the polypeptide having acetyl xylan esterase activity of claim 1 .
13. A method for degrading an acetylated xylan, comprising treating a material comprising an acetylated xylan with the polypeptide having acetyl xylan esterase activity of claim 2 .
14. The method of claim 12 , further comprising treating the material comprising the acetylated xylan with a xylan degrading enzyme.
15. The method of claim 12 , wherein the xylan degrading enzyme is selected from the group consisting of a xylanase, an arabinofuranosidase, a xylosidase, a glucuronidase, and a combination thereof.
16. The method of claim 12 , wherein the material comprising the acetylated xylan is an animal feed.
17. The method of claim 12 , wherein the material comprising the acetylated xylan is a Kraft pulp.
18. The method of claim 12 , wherein the material comprising the acetylated xylan is a cellulosic or lignocellulosic biomass.
19. A process of producing a fermentation product, comprising the steps of:
(a) pre-treating a lignocellulose-containing material;
(b) hydrolyzing the pre-treated material in the presence of a cellulolytic enzyme and the polypeptide of claim 1 ; and
(c) fermenting using a fermenting organism.
20. A process of producing a fermentation product, comprising the steps of:
(a) pre-treating a lignocellulose-containing material;
(b) hydrolyzing the pre-treated material in the presence of a cellulolytic enzyme and the polypeptide of claim 2 ; and
(c) fermenting using a fermenting organism.
21. The process of claim 19 , further comprising recovering the fermentation product.