IP Library Granted Patent US 8,569,321
Granted Patent B2
US 8,569,321 · App. 13/223,249 · Granted Oct 29, 2013

Phosphonate ester derivatives and methods of synthesis thereof

Inventors: Roy W. Ware (Raleigh, NC); Merrick R. Almond (Apex, NC); Bernhard M. Lampert (Rougemont, NC)
Assignee: Chimerix, Inc.
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Quick Facts
Patent No.
US 8,569,321
App. No.
13/223,249
Granted
Oct 29, 2013
Kind
B2
Abstract

The disclosure describes methods of synthesis of phosphonate ester derivatives. Preferred methods according to the disclosure allow for large-scale preparation of phosphonate ester compounds having high purity. In some embodiments, preferred methods according to the disclosure also allow for the preparation of phosphonate ester derivatives without the use of chromatographic purification methods and in better yield than previously used methods for preparing such compounds. Also disclosed are morphic forms of phosphonate ester derivatives.

Claims (15)

1. A morphic form of phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester (Form A) characterized by an X-ray diffraction pattern including peaks at about 5.5, 19.3, 20.8, and 21.3 degrees 2θ.

2. The morphic form of claim 1 characterized by an X-ray diffraction pattern substantially similar to that set forth in FIG. 4 .

3. The morphic form of claim 1 produced by a purification process comprising recrystallizing a crude preparation of the phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester from methanol.

4. A pharmaceutical composition comprising a morphic form of claim 1 and a pharmaceutically acceptable carrier.

5. A method for synthesizing the morphic form of phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester of claim 1 (Form A), comprising:

(a) contacting cytosine with (S)-trityl glycidyl ether in the presence of a metal carbonate and a first suitable organic solvent to form (S)-N 1 -[(2-hydroxy-3-triphenylmethoxy)propyl]cytosine;

(b) contacting (S)-N 1 -[(2-hydroxy-3-triphenylmethoxy)propyl]cytosine with phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-(hexadecyloxy)propyl]ester, sodium salt in the presence of magnesium di-tert-butoxide and a second suitable organic solvent to form phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)-2-(triphenylmethoxy)ethyl]methyl]mono[3-(hexadecyloxy)propyl]ester;

(c) contacting phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)-2-(triphenylmethoxy)ethyl]methyl]mono[3-(hexadecyloxy)propyl]ester with a protecting-group removal agent in the presence of methanol to form crude phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester; and

(d) recrystallizing the crude phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester in a third suitable organic solvent.

6. The method of claim 5 , wherein the first suitable organic solvent is N,N-dimethylformamide.

7. The method of claim 5 , wherein the second suitable organic solvent is N,N-dimethylformamide.

8. The method of claim 5 , wherein the third suitable organic solvent is methanol.

9. The method of claim 5 , wherein the product obtained comprises less than 1.5% of N 4 -alkylated material.

10. The method of claim 5 , wherein the magnesium di-tert-butoxide has a purity of greater than 98%.

11. The method of claim 5 , wherein the phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester produced has a purity of >99%.

Assignments (10)
RELEASE OF SECURITY INTEREST Recorded Apr 29, 2026
From: OHA AGENCY LLC, IN ITS CAPACITY AS ADMINISTRATIVE AGENT
To: EMERGENT BIODEFENSE OPERATIONS LANSING LLC
Reel/Frame 074509/0516 →
SECURITY INTEREST Recorded Apr 16, 2026
From: EMERGENT BIOSOLUTIONS INC.; EMERGENT BIODEFENSE OPERATIONS LANSING LLC; EMERGENT PRODUCT DEVELOPMENT GAITHERSBURG INC.; EMERGENT TRAVEL HEALTH INC.; EMERGENT MANUFACTURING OPERATIONS BALTIMORE LLC
To: ORBIMED ROYALTY & CREDIT OPPORTUNITIES V, LP, AS ADMINISTRATIVE AGENT
Reel/Frame 074389/0054 →
SECURITY INTEREST Recorded Sep 30, 2024
From: EMERGENT BIODEFENSE OPERATIONS LANSING LLC; EMERGENT BIOSOLUTIONS INC.; EMERGENT PRODUCT DEVELOPMENT GAITHERSBURG INC.; EMERGENT MANUFACTURING OPERATIONS BALTIMORE LLC; EMERGENT TRAVEL HEALTH INC.; EMERGENT BIOSOLUTIONS CANADA INC.
To: WELLS FARGO BANK, NATIONAL ASSOCIATION
Reel/Frame 068746/0698 →
WELLS FARGO BANK, NATIONAL ASSOCIATION Recorded Sep 3, 2024
From: WELLS FARGO BANK, NATIONAL ASSOCIATION
To: EMERGENT BIODEFENSE OPERATIONS LANSING LLC
Reel/Frame 068828/0488 →
NOTICE OF GRANT OF SECURITY INTEREST IN U.S. PATENTS Recorded Sep 3, 2024
From: EMERGENT BIODEFENSE OPERATIONS LANSING LLC; EMERGENT BIOSOLUTIONS CANADA INC.; EMERGENT BIOSOLUTIONS INC.; EMERGENT MANUFACTURING OPERATIONS BALTIMORE LLC; EMERGENT PRODUCT DEVELOPMENT GAITHERSBURG INC.; EMERGENT TRAVEL HEALTH INC.
To: OHA AGENCY LLC
Reel/Frame 068828/0233 →
SECURITY INTEREST Recorded May 18, 2023
From: EMERGENT BIODEFENSE OPERATIONS LANSING LLC
To: WELLS FARGO BANK, NATIONAL ASSOCIATION, AS ADMINISTRATIVE AGENT
Reel/Frame 063689/0954 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE: EMERGENT BIODEFENSE OPERATIONS LANSING LLC 3500 MARTIN LUTHER KING JR. BLVD, LANSING, MICHIGAN 48906 PREVIOUSLY RECORDED AT REEL: 061720 FRAME: 0982. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Dec 4, 2022
From: CHIMERIX, INC.
To: EMERGENT BIODEFENSE OPERATIONS LANSING LLC
Reel/Frame 062054/0526 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 10, 2022
From: CHIMERIX, INC.
To: EMERGENT BIODEFENSE OPERATIONS LANSING LLC
Reel/Frame 061720/0982 →
LICENSE Recorded Oct 29, 2019
From: CHIMERIX, INC.
To: SYMBIO PHARMACEUTICALS LIMITED
Reel/Frame 050864/0318 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 24, 2011
From: WARE, ROY W.; ALMOND, MERRICK R.; LAMPERT, BERNHARD M.
To: CHIMERIX, INC.
Reel/Frame 027109/0809 →
Continuity (2)
Provisional Application 61378743 · Aug 31, 2010
Related Publication 20120058976A1 · Mar 8, 2012