Microfludic protein crystallography techniques
The present invention relates to microfluidic devices and methods facilitating the growth and analysis of crystallized materials such as proteins. In accordance with one embodiment, a crystal growth architecture is separated by a permeable membrane from an adjacent well having a much larger volume. The well may be configured to contain a fluid having an identity and concentration similar to the solvent and crystallizing agent employed in crystal growth, with diffusion across the membrane stabilizing that process. Alternatively, the well may be configured to contain a fluid having an identity calculated to affect the crystallization process. In accordance with the still other embodiment, the well may be configured to contain a material such as a cryo-protectant, which is useful in protecting the crystalline material once formed.
1. A method for mixing a first fluid and a second fluid in different portions in a microfluidic device, the method comprising:
providing a microfluidic device comprising a plurality of compound wells, wherein each compound well comprises a first well having a first volume and a second well having a second volume, wherein a ratio of the first volume to the second volume of at least one compound well differs from that of the remaining compound wells;
filling the first wells with said first fluid;
filling the second wells with said second fluid; and
placing the first well of each compound well in fluid communication with the second well, thereby allowing the first fluid and second fluid to mix by free-interface diffusion in portions that differ between compound wells.
2. The method of claim 1 , wherein each compound well further comprises a microchannel connecting the first well and the second well, and an interface valve disposed across the microchannel, and wherein placing the first well of each compound well in fluid communication comprises releasing the interface valve.
3. The method of claim 1 , wherein each compound well further comprises a first microchannel through which said filling of the first well occurs, a second microchannel through which said filling of the second well occurs, a first containment valve disposed across the first microchannel, and a second containment valve disposed across the second microchannel, and
wherein, before placing the first well of each compound well in fluid communication, the first containment valves are actuated after filling the first wells and the second containment valves are actuated after filling the second wells.
4. The method of claim 1 , wherein filling the first and second wells comprises dead-end filling.
5. The method of claim 1 , wherein after the first fluid and second fluid have been allowed to mix, a property of the resulting mixtures is measured.
6. A method of mixing a first fluid and a second fluid in adjustable portions in a microfluidic device, the method comprising:
providing a microfluidic device comprising a first well, a plurality of first control channels disposed across the first well, and a second well;
filling the first well with said first fluid;
filling the second well with said second fluid;
pressurizing at least one first control channel to divide the first well into a plurality of first chambers; and
placing the first well in fluid communication with the second well, such that at least one of said first chambers is in fluid communication with the second well, thereby allowing the first fluid and second fluid to mix by free-interface diffusion in portions determined by the pressurized first control channels.
7. The method of claim 6 , wherein the microfluidic device further comprises a plurality of second control channels disposed across the second well, and said method further comprises pressurizing at least one second control channel after filling the second well, thereby dividing the second well into a plurality of second chambers.
8. The method of claim 6 , wherein the microfluidic device further comprises a microchannel connecting the first well and the second well; and an interface valve disposed across the microchannel, and wherein placing the first well in fluid communication with the second well occurs by releasing the interface valve.
9. The method of claim 6 , wherein the microfluidic device further comprises a first microchannel through which said filling of the first well occurs, a second microchannel through which said filling of the second well occurs, a first containment valve disposed across the first microchannel, and a second containment valve disposed across the second microchannel, and
wherein, prior to placing the first well in fluid communication with the second well, the first containment valve is actuated after filling the first well and the second containment valve is actuated after filling the second well.
10. The method of claim 6 , wherein filling the first and second wells comprises dead-end filling.
11. The method of claim 6 , wherein after the first fluid and second fluid have been allowed to mix, a property of the resulting mixtures is measured.
12. A method of mixing a first fluid and a second fluid at varying rates in a microfluidic device, the method comprising:
providing a microfluidic device comprising a plurality of compound wells, wherein each compound well comprises a first well, a second well, and one or more microchannels connecting the first and second wells, wherein the amount, average length, and/or average cross sectional area of the microchannels vary between compound wells;
filling the first wells with said first fluid;
filling the second wells with said second fluid; and
placing the first wells in fluid communication with the second wells via the microchannels, thereby allowing the first fluid and second fluid to mix by free-interface diffusion at rates that vary between compound wells.
13. The method of claim 12 , wherein each compound well in said microfluidic device further comprises at least one interface valve, such that one interface valve is disposed across each microchannel, and said placing step occurs by releasing the interface valves.
14. The method of claim 12 , wherein each compound well in said microfluidic device further comprises:
a first filling microchannel through which said filling of the first well occurs, a second filling microchannel through which said filling of the second well occurs, a first containment valve disposed across the first filling microchannel, and a second containment valve disposed across the second filling microchannel, and
wherein, prior to placing the first wells in fluid communication with the second wells, the first containment valves are actuated after filling the first wells, and the second containment valves are actuated after filling the second wells.
15. The method of claim 12 , wherein filling the first and second wells comprises dead-end filling.
16. The method of claim 12 , wherein after the first fluid and second fluid have been allowed to mix, a property of the resulting mixtures is measured.
17. A method of capturing, in a microfluidic device, a chemical gradient resulting from the diffusive mixing of a first fluid and a second fluid, the method comprising:
providing a microfluidic device comprising a first well, at least one first control channel disposed across the first well, and a second well;
filling the first well with said first fluid;
filling the second well with said second fluid;
placing the first well in fluid communication with the second well, thereby allowing the first fluid and second fluid to begin mixing by free-interface diffusion; and
pressurizing at least one first control channel before mixing has completed, thereby dividing the first well into a plurality of first chambers, such that concentrations of the first fluid and second fluid differ between first chambers.
18. The method of claim 17 , wherein the microfluidic device further comprises at least one second control channel disposed across the second well, and
wherein at least one second control channel is pressurized after placing the first well in fluid communication with the second well during free-interface diffusion, thereby dividing the second well into a plurality of second chambers such that concentrations of the first fluid and second fluid differ between second chambers.
19. The method of claim 17 , wherein the microfluidic device further comprises a microchannel connecting the first well and the second well, and an interface valve disposed across the microchannel, and
wherein placing the first well in fluid communication with the second well occurs by releasing the interface valve.
20. The method of claim 17 , wherein the microfluidic device further comprises a first microchannel through which said filling of the first well occurs, a second microchannel through which said filling of the second well occurs, a first containment valve disposed across the first microchannel, and a second containment valve disposed across the second microchannel, and
wherein, prior to placing the first well in fluid communication with the second well, the first containment valve is actuated after filling the first well and the second containment valve is actuated after filling the second well.
21. The method of claim 17 , wherein filling the first and second wells comprises dead-end filling.
22. The method of claim 17 , wherein after the first fluid and second fluid have been allowed to mix, a property of the resulting mixtures is measured.