IP Library Granted Patent US 9,732,083
Granted Patent B2
US 9,732,083 · App. 13/496,188 · Granted Aug 15, 2017

Tricyclic gyrase inhibitors

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Quick Facts
Patent No.
US 9,732,083
App. No.
13/496,188
Granted
Aug 15, 2017
Kind
B2
Abstract

Disclosed herein are compounds having the structure of Formula I and pharmaceutically suitable salts, esters, and prodrugs thereof that are useful as antibacterially effective tricyclic gyrase inhibitors. Related pharmaceutical compositions, uses and methods of making the compounds are also contemplated.

Claims (17)

1. An intermediate compound having the structure:

wherein

G 1 and G 2 are leaving groups independently selected from the group consisting of SH, OH, Cl, Br, F, I, SR, SOR, SO 2 R, OSO 2 R, tosylate, triflate and OAr;

R is C1-8 alkyl, aryl, or heteroaryl;

Ar is aryl or heteroaryl containing 0-5 O, S, or N atoms optionally substituted with C1-C4 alkyl, C1-C4 alkoxy, halo or NO 2 ;

R 8 is

(a) an interacting substituent selected from the group consisting of Cl, F, Br, NH 2 , 1-3C alkyl, amino-1-3C alkyl, aminocyclopropyl, OCH 3 , OCH 2 CH 3 , cyclopropyl, CH 2 cyclopropyl, CH 2 Cl, CHCl 2 , CH 2 F, CHF 2 , CF 3 , CH 2 CH 2 F, CH 2 CHF 2 , CH 2 CF 3 , NHNH 2 , NHOH, NHNHCH 3 , NHOCH 3 , NHCD 3 , SCH 3 , and NHCOH; or

(b) an amine protected with a protecting group, wherein the protecting group is selected from the group consisting of carbobenzyloxy (Cbz) and BOC; and

X, Y and Z are independently selected from the group consisting of N, CR X , CR Y , and CR Z respectively, provided that no more than two of X, Y and Z are N,

wherein R X is H or an interacting substituent selected from the group consisting of CH 3 , Cl, Br, and F;

wherein R Y is H or an interacting substituent selected from the group consisting of CH 3 , CHF 2 , CF 3 CN, CH 2 CH 3 , Cl, Br, and F;

wherein R Z is H or an interacting substituent selected from the group consisting of CH 3 , Cl, Br, and F;

with a proviso wherein R 8 is not CH 3 .

2. The intermediate compound of claim 1 wherein R 8 is an amine protected with carbobenzyloxy (Cbz) or BOC.

3. The intermediate compound of claim 2 , wherein the G 1 and G 2 are leaving groups independently selected from the group consisting of mesylate, triflate, O-pyrimidine, O-phenyl and O-pyridine.

4. The intermediate compound of claim 1 , wherein the OAr for G 1 and G 2 is OBt, wherein Bt is benzotriazole.

5. The intermediate compound of claim 2 , wherein the amine is selected from the group consisting of NHCD 3 , NHCH 3 , NHCH 2 CH 3 , and NH 2 and is protected with Cbz or BOC.

Assignments (8)
MERGER Recorded Aug 8, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 061102/0145 →
RELEASE OF SECURITY INTEREST Recorded Jul 24, 2015
From: ROYAL BANK OF CANADA, AS ADMINISTRATIVE AGENT
To: TRIUS THERAPEUTICS, INC.; OPTIMER PHARMACEUTICALS, INC.
Reel/Frame 036178/0175 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 9, 2015
From: TRIUS THERAPEUTICS LLC
To: MERCK SHARP & DOHME CORP.
Reel/Frame 036047/0228 →
CHANGE OF NAME Recorded Jul 9, 2015
From: TRIUS THERAPEUTICS, INC.
To: TRIUS THERAPEUTICS LLC
Reel/Frame 036084/0279 →
SECURITY AGREEMENT Recorded Nov 13, 2013
From: OPTIMER PHARMACEUTICALS, INC.; TRIUS THERAPEUTICS INC.
To: ROYAL BANK OF CANADA, AS ADMINISTRATIVE AGENT
Reel/Frame 031628/0850 →
CONFIRMATORY LICENSE Recorded Feb 15, 2013
From: LAWRENCE LIVERMORE NATIONAL SECURITY, LLC
To: U.S. DEPARTMENT OF ENERGY
Reel/Frame 029818/0121 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 15, 2012
From: BENSEN, DANIEL; CHEN, ZHIYONG; FINN, JOHN M; LAM, THANH TO; LEE, SUK JOONG; LI, XIAOMING; PHILLIPSON, DOUGLAS W; TARI, LESLIE WILLIAM; TRZOSS, MICHAEL; ZHANG, JUNHU; ARISTOFF, PAUL; JUNG, MICHAEL
To: TRIUS THERAPEUTICS, INC.
Reel/Frame 028387/0795 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 6, 2012
From: LIGHTSTONE, FELICE C.; WONG, SERGIO E.; NGUYEN, TOAN B.
To: LAWRENCE LIVERMORE NATIONAL SECURITY, LLC
Reel/Frame 028007/0990 →