IP Library Granted Patent US 8,835,387
Granted Patent B2
US 8,835,387 · App. 13/769,100 · Granted Sep 16, 2014

Histidyl-tRNA synthetases for treating autoimmune and inflammatory diseases

Inventors: Kyle P. Chiang (Cardiff, CA); Elisabeth Gardiner (San Diego, CA); Ching-Fun Lau (New Territories, HK); Wing-Sze Lo (Chai Wan, HK); Jeffrey Greve (Berkeley, CA); Melissa Ashlock (Mount Vernon, NH); John D. Mendlein (Encinitas, CA)
Assignees: aTyr Pharma, Inc.; Pangu Biopharma Limited
C12N9/93A61K38/17A61K38/16A61K48/00
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Quick Facts
Patent No.
US 8,835,387
App. No.
13/769,100
Granted
Sep 16, 2014
Kind
B2
Abstract

The present invention relates generally to compositions and methods comprising histidyl-tRNA synthetase polypeptides or other specific blocking agents for the treatment autoimmune diseases and other inflammatory diseases, including those related to Jo-1 antibodies.

Claims (30)

1. A therapeutic composition, comprising a histidyl-tRNA synthetase (HRS) polypeptide of 500-506 amino acids in length that is least 90% identical to SEQ ID NO:70 (HRS(1-506)) and lacks residues 507-509 of SEQ ID NO:1, wherein the composition is: a) at least about 95% pure; b) less than about 5% aggregated; and c) substantially endotoxin-free, and wherein the HRS polypeptide has reduced interchain disulfide formation under reducing conditions relative to the polypeptide of SEQ ID NO:1 (full-length HRS).

2. The composition of claim 1 , wherein the HRS polypeptide is 505-506 amino acids in length is at least 90% identical to SEQ ID NO:70.

3. The composition of claim 1 , wherein the HRS polypeptide is 506 amino acids in length.

4. The composition of claim 1 , wherein the HRS polypeptide comprises SEQ ID NO:70.

5. The composition of claim 1 , wherein the HRS polypeptide consists of SEQ ID NO:70.

6. The composition of claim 1 , where the HRS polypeptide is 505 amino acids in length.

7. The composition of claim 6 , where the HRS polypeptide comprises residues 2-506 of SEQ ID NO:70 (HRS(2-506)).

8. The composition of claim 7 , where the HRS polypeptide consists of residues 2-506 of SEQ ID NO:70 (HRS(2-506)).

9. The composition of claim 1 , wherein the HRS polypeptide has a mutation of at least one cysteine residue.

10. The composition of claim 9 , wherein the at least one cysteine residue is selected from Cys174, Cys191, Cys224, Cys235, and Cys455.

11. The composition of claim 1 , wherein the HRS polypeptide has increased biological activity, stability, and/or homogeneity relative to a polypeptide of SEQ ID NO:1 (full-length human HRS) under comparable conditions, ranging from about 4-40° C., and a pH of about 6.0-8.0.

12. The composition of claim 11 , wherein the conditions include a temperature of about 20-25° C. (room temperature) or about 37° C. and a pH of about 7.0-7.5, optionally over a period of about 1, 2, 3, 4, 5, 6, or 7 days.

13. The composition of claim 11 , wherein increased activity comprises an absolute increase in an anti-inflammatory activity or specific binding to an anti-Jo-1 antibody of at least about 10%.

14. The composition of claim 11 , wherein the HRS polypeptide has reduced charge heterogeneity relative to the polypeptide of SEQ ID NO:1 (full-length HRS).

15. The composition of claim 11 , wherein the HRS polypeptide has reduced formation of high molecular weight aggregates in solution relative to the polypeptide of SEQ ID NO:1 (full-length HRS).

16. The composition of claim 11 , wherein increased homogeneity comprises at least a 10% increase in the monodispersion of the HRS polypeptide relative to the polypeptide of SEQ ID NO:1.

17. The composition of claim 1 , wherein the HRS polypeptide has increased yield of soluble protein upon recombinant production in E. coli relative to the polypeptide of SEQ ID NO:1 (full-length HRS).

18. The composition of claim 1 , where the HRS polypeptide is fused to a heterologous fusion partner, optionally a T-cell ligand.

19. A method of treating a disease associated with an autoantibody comprising administering to a subject in need thereof a therapeutic composition of claim 1 .

20. The method of claim 19 , wherein the therapeutic composition is administered to the subject prior to the appearance of disease symptoms.

21. The method of claim 19 , wherein the HRS polypeptide results in reduced muscle or lung inflammation.

22. The method of claim 19 , wherein the HRS polypeptide induces tolerance.

23. The method of claim 19 , wherein the disease is selected from the group consisting of inflammatory myopathies, including inflammatory myopathies, polymyositis, dermatomyositis and related disorders, polymyositis-scleroderma overlap, inclusion body myositis (IBM), anti-synthetase syndrome, interstitial lung disease, arthritis, and Reynaud's phenomenon.

24. A method of reducing tissue inflammation comprising administering to a subject in need thereof a composition comprising of claim 1 .

25. The method of claim 24 , wherein the tissue is selected from muscle, gastrointestinal tissue, lung, and skin.

26. A method of treating a muscular dystrophy comprising administering to a subject in need thereof a composition of claim 1 .

27. The method of claim 26 , wherein the muscular dystrophy is selected from Duchenne muscular dystrophy, Becker muscular dystrophy, Emery-Dreifuss muscular dystrophy, Limb-girdle muscular dystrophy, facioscapulohumeral muscular dystrophy, myotonic dystrophy, oculopharyngeal muscular dystrophy, distal muscular dystrophy, and congenital muscular dystrophy.

28. A method of treating rhabdomyolysis, muscle wasting, cachexia, muscle inflammation, or muscle injury comprising administering to a subject in need thereof a composition of claim 1 .

29. The method of claim 27 , where the muscular dystrophy is facioscapulohumeral muscular dystrophy.

30. The method of claim 29 , where the facioscapulohumeral muscular dystrophy is infant or child onset.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 30, 2013
From: LAU, CHING-FUN; LO, WING-SZE
To: PANGU BIOPHARMA LIMITED
Reel/Frame 031120/0728 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 30, 2013
From: CHIANG, KYLE P.; GARDINER, ELISABETH; GREVE, JEFFREY; ASHLOCK, MELISSA; MENDLEIN, JOHN D.
To: ATYR PHARMA, INC.
Reel/Frame 031120/0738 →
Continuity (4)
Provisional Application 61725414 · Nov 12, 2012
Provisional Application 61655358 · Jun 4, 2012
Provisional Application 61599802 · Feb 16, 2012
Related Publication 20130344096A1 · Dec 26, 2013