Systems and methods for regularized reconstructions in MRI using side information
Systems and methods for magnetic resonance imaging (MRI) using side information for improved reconstruction are disclosed. In one aspect, in accordance with one example embodiment, images obtained using heteronuclei, such as Fluorine-19 ( 19 F), can be reconstructed using one or more methods to provide improved resolution and detail. The system can use anatomical proton MRI scans. The system can use multiple smoothing techniques to improve the signal-to-noise ratio (SNR). The system can also use weighted smoothing using information from anatomical proton MRI scans to improve resolution.
1. A method comprising:
obtaining a first magnetic resonance (MRI) image using hydrogen (1H);
obtaining a second MRI image using a secondary nucleus other than hydrogen; and
reconstructing the second image using side information from the first image, wherein reconstructing the second image comprises regularizing the image using a quadratic roughness penalty, and wherein the quadratic roughness penalty comprises a differencing matrix and a plurality of weights.
2. The method of claim 1 , wherein the secondary nucleus is Fluorine-19 (19F).
3. The method of claim 1 , wherein the secondary nucleus is one or more selected from the group consisting of sodium (23Na), carbon (13C), phosphorus (31P), helium (3He), and xenon (129Xe).
4. The method of claim 1 , wherein the plurality of weights are binary;
wherein a first weight of the plurality of weights is set to 0 if the side information from the first image indicates an edge; and
wherein a second weight of the plurality of weights is set to 1 if the side information from the first image does not indicate an edge.
5. The method of claim 1 , wherein each weight in the plurality of weights varies continuously between 0 and 1 based on the side information from the first image.
6. The method of claim 5 , wherein the higher the contrast in the side information of the first image, the closer a first weight of the plurality of weights is to 0; and wherein the lower the contrast in the side information of the first image, the closer a first weight of the plurality of weights is to 1.
7. The method of claim 1 , wherein reconstructing the second image comprises:
filtering the first image using a filter to obtain a plurality of calculated filter weights; and
filtering the second image using the filter and the calculated filter weights from the first image.
8. The method of claim 7 , wherein the filter comprises a non-local-means (NLM) filter.
9. The method of claim 1 , further comprising including terms in the cost function of the image reconstruction to enforce sparsity.
10. The method of claim 9 , wherein the sparsity is in the image domain.
11. The method of claim 9 , wherein the sparsity is enforced using an L1 norm.
12. A system, comprising:
a magnetic resonance imaging (MRI) device;
one or more processors; and
at least one memory in communication with the MRI device, storing computer-readable instructions that, when executed by the one or more processors, cause the system to:
obtain a first magnetic resonance (MRI) image using hydrogen (1H);
obtain a second MRI image using a secondary nucleus other than hydrogen; and
reconstruct the second image using side information from the first image, wherein reconstructing the second image comprises regularizing the image using a quadratic roughness penalty, and wherein the quadratic roughness penalty comprises a differencing matrix and a plurality of weights.
13. The system of claim 12 , wherein the secondary nucleus is Fluorine-19 (19F).
14. The system of claim 12 , wherein the secondary nucleus is one or more selected from the group consisting of sodium (23Na), carbon (13C), phosphorus (31P), helium (3He), and xenon (129Xe).
15. The system of claim 12 , wherein the plurality of weights are binary;
wherein a first weight of the plurality of weights is set to 0 if the side information from the first image indicates an edge; and
wherein a second weight of the plurality of weights is set to 1 if the side information from the first image does not indicate an edge.
16. The system of claim 12 , wherein each weight in the plurality of weights varies continuously between 0 and 1 based on the side information from the first image.
17. The system of claim 16 , wherein the higher the contrast in the side information of the first image, the closer a first weight of the plurality of weights is to 0; and wherein the lower the contrast in the side information of the first image, the closer a first weight of the plurality of weights is to 1.
18. The system of claim 12 , wherein reconstructing the second image comprises:
filtering the first image using a filter to obtain a plurality of calculated filter weights; and
filtering the second image using the filter and the calculated filter weights from the first image.
19. The system of claim 18 , wherein the filter comprises a non-local-means (NLM) filter.
20. The system of claim 12 , further comprising including terms in the cost function of the image reconstruction to enforce sparsity.
21. The system of claim 20 , wherein the sparsity is in the image domain.
22. The system of claim 20 , wherein the sparsity is enforced using an L1 norm.
23. A method comprising:
obtaining a first magnetic resonance (MRI) image using hydrogen (1H);
obtaining a second MRI image using a secondary nucleus other than hydrogen; and
reconstructing the second image using side information from the first image, wherein reconstructing the second image comprises:
filtering the first image using a filter to obtain a plurality of calculated filter weights, and
filtering the second image using the filter and the calculated filter weights from the first image.
24. The method of claim 23 , further comprising including terms in the cost function of the image reconstruction to enforce sparsity.
25. A system, comprising:
a magnetic resonance imaging (MRI) device;
one or more processors; and
at least one memory in communication with the MRI device, storing computer-readable instructions that, when executed by the one or more processors, cause the system to:
obtain a first magnetic resonance (MRI) image using hydrogen (1H);
obtain a second MRI image using a secondary nucleus other than hydrogen; and
reconstruct the second image using side information from the first image, wherein reconstructing the second image comprises:
filtering the first image using a filter to obtain a plurality of calculated filter weights, and
filtering the second image using the filter and the calculated filter weights from the first image.