IP Library Granted Patent US 9,176,139
Granted Patent B2
US 9,176,139 · App. 13/888,293 · Granted Nov 3, 2015

LOX and LOXL2 inhibitors and uses thereof

Inventors: Victoria Smith (Burlingame, CA); Scott Ogg (San Francisco, CA); Peter Van Vlasselaer (Portola Valley, CA); Vivian E. Barry (Foster City, CA); Derek Marshall (Pacifica, CA); Alison Kay Holzer (Redwood City, CA); Hector Rodriguez (Brisbane, CA); Miho Oyasu (San Mateo, CA); Scott Alan McCauley (Brisbane, CA); Carlos Aurelio Garcia (San Lorenzo, CA); Donna Hiroko Tokuoka Biermann (San Mateo, CA)
Assignee: Gilead Biologics, Inc.
G01N33/57423A61K39/3955A61K45/06C07K16/40C12Q1/6886G01N33/57438G01N33/57484A61K2039/505C07K2317/24C07K2317/30C07K2317/33C07K2317/76C07K2317/77C07K2317/92G01N2333/90633
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Quick Facts
Patent No.
US 9,176,139
App. No.
13/888,293
Granted
Nov 3, 2015
Kind
B2
Abstract

The present application relates to anti-LOX and anti-LOXL2 antibodies and their use in purification, diagnostic and therapeutic methods. Antibodies include monoclonal antibodies, humanized antibodies and functional fragments thereof. Anti-LOX and anti-LOXL2 antibodies can be used to identify and treat conditions such as a fibrotic condition, angiogenesis, or to prevent a transition from an epithelial cell state to a mesenchymal cell state.

Claims (60)

1. A method of treating or inhibiting a fibrosis disease in a human in need thereof comprising, administering to the human an isolated antibody or antigen binding fragment thereof, wherein the antibody or antigen binding fragment thereof specifically binds to human lysyl oxidase-like 2 (LOXL2) protein and comprises a heavy chain variable region complementarity determining regions (CDRs) comprising the amino acid sequences set forth as SEQ ID NOs: 41, 42, and 70, and light chain variable region CDRs comprising the amino acid sequences set forth as SEQ ID NOs:, 57, 58, and 59.

2. The method of claim 1 , wherein the fibrosis disease is selected from the group consisting of a liver fibrosis, a lung fibrosis, a kidney fibrosis, a cardiac fibrosis, and scleroderma.

3. A method of treating or inhibiting a fibrosis disease in a human in need thereof comprising, administering to the human an isolated antibody or antigen binding fragment thereof, wherein the antibody or antigen binding fragment thereof specifically binds to human LOXL2 protein and comprises the heavy chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 25, 26, 27, or 28.

4. The method of claim 3 , wherein the heavy chain variable region comprises the amino acid sequence set forth as SEQ ID NO: 27.

5. The method of claim 3 , wherein the antibody antigen binding fragment thereof further comprising a light chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 30, 31, or 32.

6. The method of claim 5 , wherein the light chain variable region comprises the amino acid sequence set forth as SEQ ID NO: 31.

7. The method of claim 5 , wherein the isolated antibody or antigen binding fragment thereof comprising the heavy chain variable region comprises the amino acid sequence set forth as SEQ ID NO: 27 and the light chain variable region comprises the amino acid sequence set forth as SEQ ID NO: 31.

8. The method of claim 1 , wherein the isolated antibody or antigen binding fragment thereof is a Fv, a scFv, a Fab, a F(ab′) 2 , or monoclonal.

9. The method of claim 1 , wherein the isolated antibody or antigen binding fragment thereof is humanized.

10. The method of claim 1 , wherein the isolated antibody or antigen binding fragment thereof is labeled with a detectable label, a therapeutic agent or both.

11. The method of claim 1 , further comprising co-administering a second therapeutic agent.

12. The method of claim 11 , wherein the second therapeutic agent is an antibody or an anti-fibrotic agent.

13. The method of claim 12 , wherein the anti-fibrotic agent is selected from the group consisting of ethylenediamine, hydrazine, phenylhydrazine, semicarbazide, urea, aminonitriles, beta-aminopropionitrile (BAPN), 2-nitroethylamine, unsaturated or saturated haloamines, 2-bromo-ethylamine, 2-chloroethylamine, 2-trifluoroethylamine, 3-bromopropylamine, p-halobenzylamines, selenohomocysteine lactone, copper chelating agents, thiolamines, D-penicillamine, 2-amino-5-mercapto-5-methylhexanoic acid, D-2-amino-3-methyl-3-((2-acetamidoethyl)dithio)butanoic acid, p-2-amino-3-methyl-3-((2-aminoethyl)dithio)butanoic acid, sodium-4-((p-1-dimethyl-2-amino-2-carboxyethyl)dithio) butane sulphinate, 2-acetamidoethyl-2-acetamidoethanethiol suiphanate, and sodium-4-mercaptobutanesuiphinate trihydrate.

14. The method of claim 1 , wherein the human in need thereof is stabilized following administration of the antibody or antigen binding fragment thereof for a period of at least 1 month, 2 months, 3 months, 4 months, 6 months, 1 year, 2 years, or 3 years.

15. The method of claim 4 , wherein the fibrosis disease is selected from the group consisting of a liver fibrosis, a lung fibrosis, a kidney fibrosis, a cardiac fibrosis and scleroderma.

16. The method of claim 1 , wherein the fibrosis disease is a kidney fibrosis associated with diabetic nephropathy, vesicoureteral reflux, tubulointerstitial renal fibrosis; glomerulonephritis, glomerular nephritis including focal segmental glomerulosclerosis and membranous glomerulonephritis, or mesangiocapillary glomerular nephritis.

17. The method of claim 1 , wherein the fibrosis disease is a cardiac fibrosis associated with congestive heart failure, cardiomyopathy, post-myocardial infarction defects in heart function, cardiovascular diseases, hypertensive heart disease (HHD), myocardial infarction (MI), atherosclerosis, restenosis, or heart disease associated with cardiac ischemic events.

18. The method of claim 1 , wherein the fibrosis disease is a liver fibrosis associated with cirrhosis, chronic viral hepatitis, non-alcoholic fatty liver disease (NAFLD), alcoholic steatohepatitis (ASH), non-alcoholic steatohepatitis (NASH), primary biliary cirrhosis (PBC), biliary cirrhosis, or autoimmune hepatitis.

19. The method of claim 18 , wherein the fibrosis disease is the liver fibrosis associated with cirrhosis.

20. The method of claim 18 , wherein the fibrosis disease is non-alcoholic steatohepatitis (NASH).

21. The method of claim 18 , wherein the fibrosis disease is primary biliary cirrhosis (PBC).

22. The method of claim 18 , wherein the antibody or antigen binding fragment thereof comprising the heavy chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 25, 26, 27, or 28 and a light chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 30, 31, or 32.

23. The method of claim 18 , wherein the antibody or antigen binding fragment thereof is labeled with a detectable label, a therapeutic agent or both.

24. The method of claim 18 , wherein the antibody or antigen binding fragment thereof is a Fv, a scFv, a Fab, a F(ab′) 2 , or monoclonal.

25. The method of claim 18 , further comprising co-administering a second therapeutic agent.

26. The method of claim 25 , wherein said second therapeutic agent is an antibody or an anti-fibrotic agent.

27. The method of claim 1 , wherein the fibrosis disease is associate with idiopathic pulmonary fibrosis (IPF), cryptogenic fibrosing alveolitis, chronic fibrosing interstitial pneumonia, interstitial lung disease (ILD), diffuse parenchymal lung disease (DPLD), emphysema and chronic obstructive pulmonary disease (COPD), chronic asthma, idiopathic interstitial pneumonia, or acute respiratory distress syndrome (ARDS).

28. The method of claim 27 , wherein the fibrosis disease is idiopathic pulmonary fibrosis (IPF).

29. The method of claim 27 , wherein the antibody or antigen binding fragment thereof comprising the heavy chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 25, 26, 27, or 28 and a light chain variable region comprising the amino acid sequence set forth as SEQ ID NOs: 30, 31, or 32.

30. The method of claim 28 , wherein the antibody or antigen binding fragment thereof comprising the heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 27 and the light chain variable region comprising the amino acid sequence of SEQ ID NO: 31.

31. The method of claim 27 , wherein the antibody or antigen binding fragment thereof is labeled with a detectable label, a therapeutic agent or both.

32. The method of claim 27 , wherein the antibody or antigen binding fragment thereof is a Fv, a soFv, a Fab, a F(ab′) 2 , or monoclonal.

33. The method of claim 27 , further comprising co-administering a second therapeutic agent.

34. The method of claim 33 , wherein said second therapeutic agent is an antibody or an anti-fibrotic agent.

35. The method of claim 1 , wherein the antibody or antigen binding fragment thereof is administered intravenously, intraarterially, intramuscularly, subcutaneously, orally, or topically.

36. The method of claim 1 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

37. The method of claim 30 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

38. The method of claim 37 , wherein the pharmaceutical composition is administered intravenously or subcutaneously.

39. The method of claim 20 , wherein the antibody or antigen binding fragment thereof comprising the heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 27 and the light chain variable region comprising the amino acid sequence of SEQ ID NO: 31.

40. The method of claim 39 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

41. The method of claim 40 , wherein the pharmaceutical composition is administered intravenously or subcutaneously.

42. The method of claim 21 , wherein the antibody or antigen binding fragment thereof comprising the heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 27 and the light chain variable region comprising the amino acid sequence of SEQ ID NO: 31.

43. The method of claim 42 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

44. The method of claim 43 , wherein the pharmaceutical composition is administered intravenously or subcutaneously.

45. The method of claim 7 , wherein the antibody or antigen binding fragment thereof is labeled with a detectable label, a therapeutic agent or both.

46. The method of claim 7 , further comprising co-administering a second therapeutic agent.

47. The method of claim 46 , wherein said second therapeutic agent is an antibody or an anti-fibrotic agent.

48. The method of claim 7 , wherein the antibody or antigen binding fragment thereof is administered intravenously, intraarterially, intramuscularly, subcutaneously, orally, or topically.

49. The method of claim 7 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

50. The method of claim 49 , wherein the pharmaceutical composition is administered intravenously or subcutaneously.

51. The method of claim 15 , wherein the antibody or antigen binding fragment thereof is presented in a pharmaceutical composition.

52. The method of claim 51 , wherein the pharmaceutical composition is administered intravenously or subcutaneously.

53. The method of claim 52 , wherein the fibrosis disease is a kidney fibrosis associated with diabetic nephropathy, vesicoureteral reflux, tubulointerstitial renal fibrosis; glomerulonephritis, glomerular nephritis including focal segmental glomerulosclerosis and membranous glomerulonephritis, or mesangiocapillary glomerular nephritis.

54. The method of claim 52 , wherein the fibrosis disease is a cardiac fibrosis associated with congestive heart failure, cardiomyopathy, post-myocardial infarction defects in heart function, cardiovascular diseases, hypertensive heart disease (HHD), myocardial infarction (MI), atherosclerosis, restenosis, or heart disease associated with cardiac ischemic events.

55. The method of claim 52 , wherein the fibrosis disease is a liver fibrosis associated with cirrhosis, chronic viral hepatitis, non-alcoholic fatty liver disease (NAFLD), alcoholic steatohepatitis (ASH), non-alcoholic steatohepatitis (NASH), primary biliary cirrhosis (PBC), biliary cirrhosis, or autoimmune hepatitis.

56. The method of claim 55 , wherein the fibrosis disease is the liver fibrosis associated with cirrhosis.

57. The method of claim 55 , wherein the fibrosis disease is non-alcoholic steatohepatitis (NASH).

58. The method of claim 55 , wherein the fibrosis disease is primary biliary cirrhosis (PBC).

59. The method of claim 52 , wherein the fibrosis disease is associate with idiopathic pulmonary fibrosis (IPF), cryptogenic fibrosing alveolitis, chronic fibrosing interstitial pneumonia, interstitial lung disease (ILD), diffuse parenchymal lung disease (DPLD), emphysema and chronic obstructive pulmonary disease (COPD), chronic asthma, idiopathic interstitial pneumonia, or acute respiratory distress syndrome (ARDS).

60. The method of claim 59 , wherein the fibrosis disease is idiopathic pulmonary fibrosis (IPF).

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 26, 2014
From: SMITH, VICTORIA; OGG, SCOTT; VAN VLASSELAER, PETER; BARRY, VIVIAN E.; MARSHALL, DEREK; HOLZER, ALISON KAY; RODRIGUEZ, HECTOR; OYASU, MIHO; MCCAULEY, SCOTT ALAN; GARCIA, CARLOS AURELIO; BIERMANN, DONNA HIROKO TOKUOKA
To: ARRESTO BIOSCIENCES, INC.
Reel/Frame 032529/0663 →
MERGER Recorded Mar 26, 2014
From: ARRESTO BIOSCIENCES, INC.
To: GILEAD BIOLOGICS, INC.
Reel/Frame 032529/0695 →
Continuity (7)
Division 12185050 · Aug 1, 2008
Provisional Application 60963214 · Aug 2, 2007
Provisional Application 60963246 · Aug 2, 2007
Provisional Application 60963248 · Aug 2, 2007
Provisional Application 60963249 · Aug 2, 2007
Provisional Application 60963282 · Aug 2, 2007
Related Publication 20130324705A1 · Dec 5, 2013