IP Library Granted Patent US 8,921,388
Granted Patent B2
US 8,921,388 · App. 13/958,913 · Granted Dec 30, 2014

Dihydroxypyrimidine carbonic acid derivatives and their use in the treatment, amelioration or prevention of a viral disease

Inventors: Helmut Buschmann (Aachen, DE); Andrea Wolkerstorfer (Vienna, AT); Oliver Szolar (Vienna, AT); Norbert Handler (Vienna, AT); Stephen Cusack (Seyssinet, FR); Mark Smith (Jersey City, NJ); Sung-Sau So (Verona, NJ)
Assignees: European Molecular Biology Laboratory; F. Hoffmann-La Roche AG; Savira pharmaceuticals GmbH
C07D239/557A61K31/513A61K45/06C07D403/06C07D239/52
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Quick Facts
Patent No.
US 8,921,388
App. No.
13/958,913
Granted
Dec 30, 2014
Kind
B2
Abstract

The present invention relates to a compound having the general formula (Di), (Dii), or (Diii), optionally in the form of a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug, tautomer, racemate, enantiomer, or diastereomer or mixture thereof, which are useful in treating, ameloriating or preventing a viral disease. Furthermore, specific combination therapies are disclosed.

Claims (136)

1. A compound having the general formula (Di), (Dii), or (Diii),

wherein

X 1 is O, S or NR*;

X 2 is O or S;

X 3 is O or S;

X 4 is O or S;

X 5 is O or S;

L is —(CH 2 ) m —, —NR*—SO 2 — or —SO 2 —NR*—;

m is 1 to 4;

R 1 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted aryl), —C(O)—O—R** or —P(O)(OR**) 2 , if X 1 is NR* then R 1 and R* can optionally be bound together to form a 5- to 7-membered ring;

R 2 is a hydrocarbon group which contains from 5 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S and which contains at least one ring, wherein the hydrocarbon group can be optionally substituted;

R 3 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 4 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 5 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted C 1-6 alkyl);

R 6 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted C 1-6 alkyl);

R* is —H, or —(C 1-6 alkyl); and

R** is —H, —(C 1-6 alkyl), —(C 3-7 cycloalkyl), -(aryl), or —C 1-4 alkyl-(aryl);

wherein the optional substituent of the alkyl group is selected from the group consisting of halogen, —CN, —NR*R*, —OH, and —O—C 1-6 alkyl; and

wherein the optional substituent of the cycloalkyl group, the aryl group or the hydrocarbon group is selected from the group consisting of —C 1-6 alkyl, -halogen, —CF 3 , —CN, —X 1 —R*, -aryl and —C 1-4 alkyl-aryl,

or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug, tautomer, racemate, enantiomer, or diastereomer or a mixture thereof,

with the proviso that the following compound

is disclaimed.

2. A pharmaceutical composition comprising a compound having the general formula (Di), (Dii), or (Diii),

wherein

X 1 is O, S or NR*;

X 2 is O or S;

X 3 is O or S;

X 4 is O or S;

X 5 is O or S;

L is —(CH 2 ) m —, —NR*—SO 2 — or —SO 2 —NR*—;

m is 1 to 4;

R 1 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted aryl), —C(O)—O—R** or -—P(O)(OR**) 2 , if X 1 is NR* then R 1 and R* can optionally be bound together to form a 5- to 7-membered ring,

R 2 is a hydrocarbon group which contains from 5 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S and which contains at least one ring, wherein the hydrocarbon group can be optionally substituted;

R 3 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 4 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 5 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted C 1-6 alkyl);

R 6 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted C 1-6 alkyl);

R* is —H, or —(C 1-6 alkyl); and

R** is —H, —(C 1-6 alkyl), —(C 3-7 cycloalkyl), -(aryl), or —C 1-4 alkyl-(aryl);

wherein the optional substituent of the alkyl group is selected from the group consisting of halogen, —CN, —NR*R*, —OH, and —O—C 1-6 alkyl; and

wherein the optional substituent of the cycloalkyl group, the aryl group or the hydrocarbon group is selected from the group consisting of —C 1-6 alkyl, -halogen, —CF 3 , —CN, —X 1 —R*, -aryl and —C 1-4 alkyl-aryl,

or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug, tautomer, racemate, enantiomer, or diastereomer or a mixture thereof,

and a pharmaceutically acceptable excipient.

3. A compound having the general formula (Di), (Dii), or (Diii),

wherein

X 1 is O, S or NR*;

X 2 is O or S;

X 3 is O or S;

X 4 is O or S;

X 5 is O or S;

L is —(CH 2 ) m —, —NR*—SO 2 — or —SO 2 —NR*—;

m is 1 to 4;

R 1 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted aryl), —C(O)—O—R** or —P(O)(OR**) 2 , if X 1 is NR* then R 1 and R* can optionally be bound together to form a 5- to 7-membered ring;

R 2 is a hydrocarbon group which contains from 5 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S and which contains at least one ring, wherein the hydrocarbon group can be optionally substituted;

R 3 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3 -7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 4 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl);

R 5 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted C 1-6 alkyl);

R 6 is —H, —C(O)-(optionally substituted C 1-6 alkyl), or -(optionally substituted 0 1-6 alkyl);

R* is —H, or —(C 1-6 alkyl); and

R** is —H, —(C 1-6 alkyl), —(C 3-7 cycloalkyl), -(aryl), or —C 1-4 alkyl-(aryl);

wherein the optional substituent of the alkyl group is selected from the group consisting of halogen, —CN, —NR*R*, —OH, and —O—C 1-6 alkyl; and

wherein the optional substituent of the cycloalkyl group, the aryl group or the hydrocarbon group is selected from the group consisting of —C 1-6 alkyl, -halogen, —CF 3 , —CN, —X 1 —R*, -aryl and —C 1-4 alkyl-aryl,

or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug, tautomer, racemate, enantiomer, or diastereomer or a mixture thereof,

wherein the compound is for use in the treatment, amelioration or prevention of a viral disease.

4. The compound according to claim 3 , wherein the viral disease is caused by Herpesviridae, Retroviridae, Filoviridae, Paramyxoviridae, Rhabdoviridae, Orthomyxoviridae, Bunyaviridae, Arenaviridae, Coronaviridae, Picornaviridae, Togaviridae, Flaviviridae.

5. The compound according to claim 4 , wherein the viral disease is influenza.

6. A method of treating or ameliorating a viral disease, the method comprising administering to a patient in need thereof an effective amount of a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 , or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug tautomer, racemate, enantiomer, or diastereomer or mixture thereof.

7. The method according to claim 6 , wherein the viral disease is caused by Herpesviridae, Retroviridae, Filoviridae, Paramyxoviridae, Rhabdoviridae, Orthomyxoviridae, Bunyaviridae, Arenaviridae, Coronaviridae, Picornaviridae, Togaviridae, or Flaviviridae.

8. The method according to claim 7 , wherein the viral disease is influenza.

9. The compound according to claim 1 , wherein m is 1 or 2.

10. The compound according to claim 1 , wherein R 1 is —H or -(optionally substituted C 1-6 alkyl).

11. The compound according to claim 1 , wherein R 2 is an optionally substituted aryl, optionally substituted heteroaryl or optionally substituted C 5-7 cycloalkyl.

12. The compound according to claim 1 , wherein R 2 is

and wherein the heterocyclic group, phenyl group, cyclohexyl group or cyclopentyl group can be optionally substituted in any available position by a substituent which is independently selected from —C 1-6 alkyl, halogen, —CF 3 , —CN, —OH, and —O—C 1-6 alkyl.

13. The compound according to claim 1 , wherein L is —(CH 2 ) m — , or —NR* —SO 2 —.

14. The compound according to claim 1 , wherein X 1 is 0 or NR*.

15. The method according to claim 6 , wherein a further antiviral agent is to be administered concurrently or sequentially with the compound according to claim 3 .

16. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) as defined in claim 3 ; and

(ii) at least one polymerase inhibitor which is different from the compound having the general formula (Di), (Dii), or (Diii).

17. The pharmaceutical composition according to claim 16 , wherein the at least one polymerase inhibitor which is different from the compound having the general formula (Di), (Dii), or (Diii) is selected from

(a) a compound having the general formula (A),

wherein

R A* is —H, -Hal, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), —C 1-4 alkyl-(optionally substituted aryl) or —X 1 —R 1 ;

X A1 is O, C(O), C(O)O, OC(O); S, SO, SO 2 , NR A4 , N(R A5 )C(O), or C(O)NR A5 ;

X A2 is O, S, or NR A4 ;

X A3 is O or S;

X A4 is O or S;

R A1 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl);

R A2 is a hydrocarbon group which contains from 5 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S and which contains at least one ring, wherein the hydrocarbon group can be optionally substituted;

R A3 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), or —C 1-4 alkyl-(optionally substituted aryl) if X A2 is NR A4 then R A3 can also be —OH;

R A4 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl) or if X A1 is NR A4 , then R A4 and R A1 can be joined together to form a 5- to 7-membered ring, which can optionally contain O, S or further N or if X A2 is NR A4 , then R A4 and R A3 can be joined together to form a 5- to 7-membered ring, which can optionally contain O, S or further N; and

R A5 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), -C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl); and

R A6 is —H, or —C 1-6 alkyl;

wherein the optional substituent of the alkyl group is selected from the group consisting of halogen, —CN, —NR A6 R A6 , —OH, and —O—C 1-6 alkyl;

wherein the optional substituent of the cycloalkyl group, the aryl group or the hydrocarbon group is selected from the group consisting of —C 1-6 alkyl, halogen, —CF 3 , —CN, —X A1 —R A5 and —C 1-4 alkyl-aryl;

or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodruq, tautomer, racemate, enantiomer, or diastereomer or a mixture thereof, and

(b) a compound having the general formula (C),

wherein

V C is N, or CR C6 ;

X C1 is O, S, or NR C8 ;

X C2 is NR C5 , N(R C5 )C(O), C(O)NR C5 , O, C(O), C(O)O, OC(O); S, SO, SO 2 , SO 2 N(R C5 ) or N(R C5 )SO 2 ;

R C* is —H, -Hal, -(optionally substituted C 1-6 alkyl), -(optionally substituted mono- or polycyclic group containing 3 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S), —C 1-4 alkyl-(optionally substituted mono- or polycyclic group containing 3 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S), or —X C2 —R C1 ;

R C1 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted mono- or polycyclic group containing 3 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S), —C 1-4 alkyl-(optionally substituted mono- or polycyclic group containing 3 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S);

R C2 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl) or if X C1 is NR C ′, then R C2 can also be —OH;

R C3 is —H, —R C7 , or —X C2 —R C7 ;

R C4 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl);

R C5 is —H, -(optionally substituted C 1-6 alkyl), -(optionally substituted C 3-7 cycloalkyl), -(optionally substituted aryl), —C 1-4 alkyl-(optionally substituted C 3-7 cycloalkyl), or —C 1-4 alkyl-(optionally substituted aryl);

R C6 H, —C 1-6 alkyl, -aryl, halogen or CN;

R C7 is -(optionally substituted hydrocarbon group which contains from 5 to 20 carbon atoms and optionally 1 to 4 heteroatoms selected from O, N and S and which contains at least one ring);

R C8 is —H, or —C 1-6 alkyl; and

n C is 0 to 4;

wherein the optional substituent of the alkyl group is selected from the group consisting of halogen, —CN, —NR C5 R C5 , —OH, and —O—C 1-6 alkyl;

wherein the optional substituent of the cycloalkyl group, the aryl group, the mono- or polycyclic group or the hydrocarbon group is selected from the group consisting of —C 1-6 alkyl, halogen, —CF 3 , —CN, —X c2 —R C8 and —C 1-4 alkyl-aryl;

or a pharmaceutically acceptable salt, solvate, polymorph, codrug, cocrystal, prodrug, tautomer, racemate, enantiomer, or diastereomer or a mixture thereof.

18. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 ; and

(ii) at least one neuramidase inhibitor.

19. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 ; and

(ii) at least one M2 channel inhibitor.

20. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 ; and

(ii) at least one alpha glucosidase inhibitor.

21. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 ; and

(ii) at least one ligand of another influenza target.

22. A pharmaceutical composition comprising:

(i) a compound having the general formula (Di), (Dii), or (Diii) according to claim 3 ; and

(ii) at least one medicament selected from antibiotics, anti-inflammatory agents, lipoxygenase inhibitors, EP ligands, bradykinin ligands, and cannabinoid ligands.

23. A method of treating or ameliorating a viral disease, the method comprising administering to a patient in need thereof an effective amount of a pharmaceutical composition according to any of claims 16 to 22 .

24. The method according to claim 23 , wherein the viral disease is caused by Herpesviridae, Retroviridae, Filoviridae, Paramyxoviridae, Rhabdoviridae, Orthomyxoviridae, Bunyaviridae, Arenaviridae, Coronaviridae, Picornaviridae, Togaviridae, or Flaviviridae.

25. The compound according to claim 1 , wherein the compound having the general formula (Di), (Dii), or (Diii) exhibits a % reduction of at least about 30 % at 50 μM in a cytopathic effect (CPE) assay.

26. The compound according to claim 1 , wherein the compound having the general formula (Di), (Dii), or (Diii) exhibits an IC 50 of at least about 40 μM in a fluorescence resonance energy transfer (FRET) endonuclease activity assay.

27. The method according to claim 23 , wherein the viral disease is caused by influenza.

28. A pharmaceutical composition according to any one of claims 16 - 22 , further comprising one or more pharmaceutically acceptable excipients and/or carriers.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 30, 2014
From: WOLKERSTORFER, ANDREA; SZOLAR, OLIVER; BUSCHMANN, HELMUT; HANDLER, NORBERT
To: SAVIRA PHARMACEUTICALS GMBH
Reel/Frame 034602/0665 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 30, 2014
From: CUSACK, STEPHEN
To: EUROPEAN MOLECULAR BIOLOGY LABORATORY (EMBL)
Reel/Frame 034602/0770 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 30, 2014
From: SMITH, MARK
To: HOFFMANN-LA ROCHE INC.
Reel/Frame 034602/0805 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 30, 2014
From: SO, SUNG-SAU
To: HOFFMANN-LA ROCHE INC.
Reel/Frame 034602/0858 →
Continuity (2)
Provisional Application 61679968 · Aug 6, 2012
Related Publication 20140038990A1 · Feb 6, 2014