IP Library Patent Application 14057391
Patent Application
App. No. 14/057,391

Phosphonate Ester Derivatives and Methods of Synthesis Thereof

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Patent No.
US None
App. No.
14/057,391
Abstract

The disclosure describes methods of synthesis of phosphonate ester derivatives. Preferred methods according to the disclosure allow for large-scale preparation of phosphonate ester compounds having high purity. In some embodiments, preferred methods according to the disclosure also allow for the preparation of phosphonate ester derivatives without the use of chromatographic purification methods and in better yield than previously used methods for preparing such compounds. Also disclosed are morphic forms of phosphonate ester derivatives.

Claims (38)

1 . A method for synthesizing phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-(hexadecyloxy)propyl]ester, sodium salt, in high yield comprising:

(a) contacting (dichlorophosphoryl)methyl 4-methylbenzenesulfonate with 3-(hexadecyloxy)propan-1-ol in the presence of a base in a first suitable solvent to form a resultant mixture;

(b) quenching the resultant mixture with water; and

(c) dissolving the resultant mixture in a second suitable solvent, for producing high yield of the phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-(hexadecyloxy)propyl]ester, sodium salt.

2 . The method of claim 1 , wherein the phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-hexadecyloxy)propyl]ester, sodium salt is synthesized in high yield having a purity of greater than or equal to 80%, 82.5%, 85%, 87.5%, 90.0%, 92.5%, 95%, 97.5%, or 99%.

3 . The method of claim 1 , further comprising (d) treating the second suitable solvent in step (c) with sodium hydroxide.

4 . The method of claim 1 , wherein the phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-hexadecyloxy)propyl]ester, sodium salt is synthesized with a purity of greater than or equal to 98%.

5 . The method of claim 1 , wherein the phosphonic acid, P-[[[(4-methylphenyesulfonyl]oxy]methyl]-, mono[3-(hexadecyloxy)propyl]ester, sodium salt contains less than or equal to 1%, 0.5%, 0.25%, 0.1%, or 0.01% of:

as impurity.

6 . The method of claim 1 , further comprising synthesizing the (dichlorophosphoryl)methyl 4-methylbenzenesulfonate by:

(a) contacting diethyl (tosyloxy)methylphosphonate and acetonitrile with bromotrimethylsilane and heating to form a resultant mixture; and

(b) adding a suitable solvent and oxalyl chloride to the resultant mixture to form the (dichlorophosphoryl)methyl 4-methylbenzenesulfonate.

7 . The method of claim 1 , further comprising synthesizing the 3-(hexadecyloxy)propan-1-ol by:

(a) contacting 1,3-propanediol in (N,N-dimethylformamide) with sodium hydride to form a resultant mixture; and

(b) adding a solution of hexadecyl methanesulfonate dissolved in (N,N-dimethylformamide) to the resultant mixture to form the 3-(hexadecyloxy)propan-1-ol.

8 . The method of claim 7 , further comprising synthesizing the hexadecyl methanesulfonate by:

(a) contacting 1-hexadecanol, dichloromethane and diisopropylethylamine to form a resultant mixture; and

(b) adding methanesulfonyl chloride to the resultant mixture to form the hexadecyl methanesulfonate.

9 . A method for synthesizing phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester, comprising:

contacting (S)—N 1 -[(2-hydroxy-3-(PG-O)-propyl]cytosine with phosphonic acid, P-[[[(4-methylphenyl)sulfonyl]oxy]methyl]-, mono[3-(hexadecyloxy)propyl]ester, sodium salt in the presence of magnesium di-tert-butoxide and a suitable organic solvent A to form [3-(hexadecyloxy)propyl]hydrogen [[[(S)-1-(4-amino-2-oxopyrimidin-1(2H)-yl)-3-(PG-O)-propan-2-yl]oxy]methyl]phosphonate; and

contacting [3-(hexadecyloxy)propyl]hydrogen [[[(S)-1-(4-amino-2-oxopyrimidin-1(2H)-yl)-3-(PG-O)-propan-2-yl]oxy]methyl]phosphonate with a protecting-group removal agent in the presence of a suitable organic solvent B to form phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester;

wherein PG is a hydroxyl protecting group.

10 . The method of claim 9 , further comprising recrystallizing the phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester in a suitable recrystallizing organic solvent to produce a morphic form of said phosphonic acid (Form A) characterized by an X-ray diffraction pattern including peaks at about 5.5, 19.3, 20.8, and 21.3 degrees 2θ.

11 . The method of claim 9 , further comprising synthesizing the (S)—N 1 -[(2-hydroxy-3-(PG-O)-propyl]cytosine by:

contacting cytosine with (S)-2-(PG-O-methyl)oxirane in the presence of a metal carbonate and a suitable organic solvent C to form (S)—N 1 -[(2-hydroxy-3-(PG-O)-propyl]cytosine.

12 . The method of claim 9 , wherein PG is triphenylmethyl.

13 . The method of claim 9 , wherein the solvent A is N,N-dimethylformamide.

14 . The method of claim 9 , wherein the solvent B is an alcohol.

15 . The method of claim 14 , wherein the solvent B is methanol.

16 . The method claim 11 , wherein the solvent C is N,N-dimethylformamide.

17 . The method of claim 9 , further comprising recrystallizing the phosphonic acid, [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester from methanol.

18 . The method of claim 17 , wherein the recrystallized phosphonic acid, [[(S)-2-(4-amino-2-oxo-1 (2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester is isolated from methanol at a temperature no lower than 20° C.

19 . A morphic form of phosphonic acid [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester.

20 . The morphic form according to claim 19 , wherein the morphic form is greater than or equal to 91% wt/wt pure.

21 . The morphic form according to claim 19 , wherein the morphic form is not a hydrate.

22 . A crystalline form of phosphonic acid [[(S)-2-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1-(hydroxymethyl)ethoxy]methyl]mono[3-(hexadecyloxy)propyl]ester.

23 . The crystalline form according to claim 22 , wherein the crystalline form is greater than or equal to 91% wt/wt pure.

24 . The crystalline form according to claim 22 isolated from methanol at a temperature no lower than 20° C.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 16, 2014
From: WARE, ROY W.; ALMOND, MERRICK R.; LAMPERT, BERNHARD M.
To: CHIMERIX, INC.
Reel/Frame 034518/0714 →