Bin1 as a prognostic marker in cardiovascular disease
The present disclosure provides methods involving use of BIN1 expression levels, in heart tissue, in evaluating the risk of a poor outcome in a patient diagnosed with congestive heart failure. The methods finds use in evaluating patients who are heart transplant candidates as well as in assessing therapy options and efficacy of treatment in congestive heart failure patients.
1. A method for determining a risk of a poor outcome in a human patient with congestive heart failure (CHF), the method comprising:
quantitatively assaying a BIN1 expression level in a heart tissue sample obtained from the patient; and
using the BIN1 expression level to determine the risk of a poor outcome in the patient, wherein a decreased BIN1 expression level relative to a reference BIN1 expression level is positively correlated to an increased risk of a poor outcome, wherein the reference BIN1 expression level is BIN1 expression level in heart of a healthy human subject.
2. The method of claim 1 , wherein the patient has received a heart transplant and the heart tissue sample is from the transplanted heart.
3. The method of claim 1 , wherein the heart of the patient is connected to a mechanical assist device.
4. The method of claim 1 , wherein the patient is undergoing treatment for CHF.
5. The method of claim 2 , wherein the patient is undergoing immunosuppression therapy.
6. The method of claim 1 , wherein the assaying comprises measuring the level of BIN1 mRNA.
7. The method of claim 1 , wherein the assaying comprises measuring the level of BIN1 protein.
8. The method of claim 1 , comprising assaying a CaV1.2 expression level and normalizing the BIN1 expression level using the assayed CaV1.2 expression level.
9. The method of claim 1 , wherein the poor outcome is cardiac mortality.
10. A method for determining a risk of a poor outcome in a human patient with congestive heart failure (CHF), the method comprising:
quantitatively assaying a BIN1 expression level and an internal control gene expression level in a heart tissue sample obtained from the patient;
determining an Intrinsic Disease Factor (IDF) by calculating a ratio of the internal control gene expression level to the BIN1 expression level; and
using the IDF to determine the risk of a poor outcome in the patient, wherein an increased IDF
relative to a reference IDF is positively correlated to an increased risk of a poor outcome,
wherein the reference IDF is IDF in heart of a healthy human subject.
11. The method of claim 10 , wherein the internal control gene is a housekeeping gene.
12. The method of claim 10 , wherein the internal control gene is CaV1.2.
13. The method of claim 10 , wherein the assaying comprises measuring the levels of BIN1 and the internal control gene mRNA.
14. The method of claim 10 , wherein the patient has received a heart transplant and the heart tissue sample is from the transplanted heart.
15. The method of claim 10 , wherein the heart of the patient is connected to a mechanical assist device.
16. The method of claim 10 , wherein the patient is undergoing treatment for CHF.
17. The method of claim 14 , wherein the patient is undergoing immunosuppression therapy.
18. The method of claim 10 , wherein the poor outcome is cardiac mortality.
19. The method of claim 1 , further comprising:
identifying the patient as having an increased risk of a poor outcome when the BIN1 expression level is decreased relative to the reference BIN1 expression level; and
administering a treatment for congestive heart failure to the patient.
20. The method of claim 19 , wherein the treatment comprises placement of left ventricular assist device (LVAD) or an intraortic balloon pump, or a heart transplant.
21. The method of claim 6 , wherein the measuring the level of BIN1 mRNA comprises:
reverse transcribing BIN1 mRNA to produce BIN1 cDNA;
amplifying the BIN1 cDNA;
quantitatively assaying level of the amplified cDNA.
22. The method of claim 7 , wherein the measuring the level of BIN1 protein comprises contacting the heart tissue sample with an antibody that specifically binds to BIN1 protein.