Constructs and methods for the production and secretion of polypeptides
Described herein are molecules, constructs and methods for the production and secretion of polypeptides of interest by host cells, preferably bacterial host cells, and more particularly gram positive bacteria. In particular, the present invention is related to a polynucleic acid encoding a fusion protein and to uses thereof for the secretion of heterologous or homologous polypeptides of interest by a bacterial host cell, preferably Clostridium bacteria. The present invention further relates to methods and constructs for the production and secretion of heterologous or homologous polypeptides of interest proteins by host cells using such polynucleic acids and fusion proteins.
1. A polynucleic acid encoding a fusion protein which comprises in this order:
at least one signal peptide;
a carrier domain comprising a carbohydrate binding module (CBM) of a cellulosomal scaffolding protein fused to one, two, or three X modules of a cellulosomal scaffolding protein wherein at least one X module is the X2 module of the CipA scaffolding protein of C. acetobutylicum;
at least one peptide linker; and
at least one polypeptide of interest;
wherein said peptide linker links the carrier domain to the polypeptide of interest, and
wherein said polypeptide of interest comprises an enzyme.
2. The polynucleic acid of claim 1 , wherein said fusion protein comprises two or three X modules.
3. The polynucleic acid of claim 1 , wherein said signal peptide is the signal peptide of the CipC scaffolding protein of C. celluloyticum or the signal peptide of the CipA scaffolding protein of C. acetobutylicum.
4. The polynucleic acid of claim 1 , wherein said fusion protein comprises a carbohydrate binding module of type-3a (CBM3a).
5. The polynucleic acid of claim 1 , wherein said enzyme is a cell wall degrading enzyme.
6. The polynucleic acid of claim 1 , wherein said enzyme is a cellulase.
7. The polynucleic acid of claim 6 , wherein said enzyme is a cellulase of C. celluloyticum.
8. The polynucleic acid of claim 6 , wherein said enzyme is C. celluloyticum Cel48F or C. celluloyticum Cel9G.
9. The polynucleic acid of claim 1 , wherein said enzyme is cellulase Cel5H of S. degradans strain 2-40.
10. A recombinant micro-organism comprising the polynucleic acid encoding a fusion protein according to claim 1 , wherein the recombinant micro-organism is capable of secreting said enzyme when cultured under conditions effective to cause expression of the fusion protein.
11. The recombinant micro-organism of claim 10 , wherein said micro-organism is from the class of Clostridia.
12. The recombinant micro-organism of claim 10 , wherein said micro-organism is from a Clostridium strain selected from the group consisting of C. acetobutylicum and C. beijerinckii.
13. The recombinant micro-organism of claim 10 , wherein said signal peptide is the signal peptide of the CipC scaffolding protein of C. celluloyticum or the signal peptide of the CipA scaffolding protein of C. acetobutylicum.
14. The recombinant micro-organism of claim 10 , wherein said fusion protein comprises a carbohydrate binding module of type-3a (CBM3a).
15. The recombinant micro-organism of claim 10 , wherein said enzyme is a cell wall degrading enzyme.
16. The recombinant micro-organism of claim 10 , wherein said enzyme is a cellulose of C. cellulolyticum.
17. The recombinant micro-organism of claim 10 , wherein said enzyme is cellulase Cel5H of S. degradans strain 2-40.
18. A method for the production and secretion of an enzyme of interest comprising the steps of:
introducing the polynucleic acid encoding the fusion protein according to claim 1 into a recombinant micro-organism, wherein the polypeptide of interest comprises the enzyme of interest; and
culturing said recombinant micro-organism under conditions effective to cause expression of the fusion protein, wherein the enzyme of interest is secreted by the recombinant micro-organism into the culture medium of said recombinant micro-organism.
19. The polynucleotide of claim 1 , wherein the carbohydrate binding module is fused to one X module of a cellulosomal scaffolding protein, wherein said X module is the X2 module of the CipA scaffolding protein of C. acetobutylicum.
20. The recombinant micro-organism of claim 10 , wherein the fusion protein comprises a carbohydrate binding module fused to one X module of a cellulosomal scaffolding protein, wherein said X module is the X2 module of the CipA scaffolding protein of C. acetobutylicum.