IP Library Granted Patent US 9,233,960
Granted Patent B2
US 9,233,960 · App. 14/351,861 · Granted Jan 12, 2016

Compounds and anti-tumor NQO1 substrates

Inventors: Paul J. Hergenrother (Champaign, IL); David A. Boothman (Dallas, TX); Joseph S. Bair (Albany, CA); Rahul Palchaudhuri (Cambridge, MA); Elizabeth I. Parkinson (Champaign, IL)
Assignee: The Board of Trustees of the University of Illinois
C07D471/04A61K31/47C07F9/6561C07H15/26
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Quick Facts
Patent No.
US 9,233,960
App. No.
14/351,861
Granted
Jan 12, 2016
Kind
B2
Abstract

Compounds of Formula (I) can be selectively lethal toward a variety of different cancer cell types. The compounds are useful for the management, treatment, control, or adjunct treatment of diseases, where the selective lethality is beneficial in chemotherapeutic therapy.

Claims (87)

1. A compound of the Formula (I):

wherein

R 1 is alkyl;

R 3 is H;

R 2 and R 4 are each independently —X—R;

each X is independently a direct bond or a bridging group, wherein the bridging group is —O—, —S—, —NH—, —C(═O)—, —O—C(═O)—, —C(═O)—O—, —O—C(═O)—O—, or a linker of the formula —W-A-W—, wherein

each W is independently —N(R′)C(═O)—, —C(═O)N(R)—, —OC(═O)—, —C(═O)O—, —O—, —S—, —S(O)—, —S(O) 2 —, —N(R′)—, —C(═O)—, —(CH 2 ) n — where n is 1-10, or a direct bond, wherein each R′ is independently H, (C1-C6)alkyl, or a nitrogen protecting group; and

each A is independently (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, (C 3 -C 8 )cycloalkyl, (C 6 -C 10 )aryl, —(OCH 2 —CH 2 ) n — where n is 1 to about 20, —C(O)NH(CH 2 ) n — wherein n is 1 to about 6, —OP(O)(OH)O—, —OP(O)(OH)O(CH 2 ) n — wherein n is 1 to about 6, or (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, or —(OCH 2 —CH 2 ) n — interrupted between two carbons, or between a carbon and an oxygen, with a cycloalkyl, heterocycle, or aryl group;

each R is independently alkyl, alkenyl, alkynyl, heteroalkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycloalkenyl, (cycloalkyl)alkyl, (heterocycloalkyl)alkyl, (cycloalkyl)heteroalkyl, (heterocycloalkyl)heteroalkyl, aryl, heteroaryl, (aryl)alkyl, (heteroaryl)alkyl, hydrogen, hydroxy, hydroxyalkyl, alkoxy, (alkoxy)alkyl, alkenyloxy, alkynyloxy, (cycloalkyl)alkoxy, heterocycloalkyloxy, amino, alkylamino, aminoalkyl, acylamino, arylamino, sulfonylamino, sulfinylamino, —COR x , —COOR x , —CONHR x , —NHCOR x , —NHCOOR x , —NHCONHR x , —N 3 , —CN, —NC, —NCO, —NO 2 , —SH, -halo, alkoxycarbonyl, alkylaminocarbonyl, sulfonate, sulfonic acid, alkylsulfonyl, alkylsulfinyl, arylsulfonyl, arylsulfinyl, aminosulfonyl, R x S(O)R y —, R x S(O) 2 R y —, R x C(O)N(R x )R y —, R x SO 2 N(R x )R y —, R x N(R x )C(O)R y —, R x N(R x )SO 2 R y —, R x N(R x )C(O)N(R x )R y —, carboxaldehyde, acyl, acyloxy, —OPO 3 H 2 , —OPO 3 Z 2 where Z is an inorganic cation, or saccharide; where each R x is independently H, OH, alkyl or aryl, and each R y is independently a group W;

wherein any alkyl or aryl can be optionally substituted with one or more hydroxy, amino, cyano, nitro, or halo groups;

or a salt or solvate thereof;

provided that when R 1 , R 2 , and R 4 are methyl, R 3 is not H or methyl.

2. The compound of claim 1 wherein R 4 is a (C 1-20 )alkyl group.

3. The compound of claim 1 wherein R 1 is a branched (C 1-20 )alkyl group.

4. The compound of claim 1 wherein R 2 is a (C 1-20 )alkyl group.

5. The compound of claim 1 wherein R 1 is a straight chain (C 1-20 )alkyl group.

6. The compound of claim 1 wherein R 4 is a (C 1-20 )alkyl group.

7. The compound of claim 1 wherein R 1 is methyl.

8. The compound of claim 1 wherein R 2 is methyl.

9. The compound of claim 1 wherein R 1 and R 2 are both methyl.

10. The compound of claim 1 wherein R 4 is methyl.

11. A compound of Formula (I):

wherein

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is 2-methyl-propane;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is butyl;

R 1 and R 4 are methyl and R 3 is hydrogen; and R 2 is ethyl;

R 1 and R 2 are methyl and R 3 is hydrogen; and R 4 is ethyl;

R 1 is methyl; R 3 is hydrogen; R 2 is propyl; and R 4 is butyl;

R 1 and R 4 are methyl; R 2 is propyl and R 3 is hydrogen;

R 1 is propyl; R 2 and R 4 are methyl and R 3 is hydrogen;

R 1 and R 2 are ethyl; R 3 is hydrogen; and R 4 is methyl;

R 1 is propyl; R 2 is methyl; R 3 is hydrogen; and R 4 is butyl;

R 1 and R 2 are propyl; R 3 is hydrogen; and R 4 is butyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is C 12 alkyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is tert-butyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is hydroxypropyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is 3,3-dimethylbutyl [—CH 2 CH 2 C(CH 3 ) 2 CH 3 ];

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is 3-methybutyl [—CH 2 CH 2 CH(CH 3 )CH 3 ];

R 2 and R 4 are methyl; R 3 is hydrogen; and R 1 is ethyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is propyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is n-pentyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is n-hexyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is isopropyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is cyclooctyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is cyclopropyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is methylcyclopropyl;

R 1 and R 2 are methyl; R 3 is hydrogen; and R 4 is ethylcyclopropyl;

R 2 and R 4 are methyl; R 3 is hydrogen; and R 1 is C 12 alkyl;

R 1 and R 4 are methyl; R 3 is hydrogen; and R 2 is C 12 alkyl;

R 2 is —CH 2 OPO 3 Na 2 ; R 1 and R 4 are methyl; and R 3 is hydrogen;

R 2 and R 4 are methyl; R 1 is —CH 2 OPO 3 Na 2 ; and R 3 is hydrogen;

R 1 and R 2 are methyl; R 4 is —CH 2 OPO 3 Na 2 ; and R 3 is hydrogen;

R 1 and R 2 are methyl; R 4 is —CH 2 CH 2 OPO 3 Na 2 ; and R 3 is hydrogen;

R 2 is —CH 2 OH; R 1 and R 4 are methyl; and R 3 is hydrogen;

R 2 and R 4 are methyl; R 1 is —CH 2 OH; and R 3 is hydrogen;

R 1 and R 2 are methyl; R 4 is —CH 2 OH; and R 3 is hydrogen; or

R 1 and R 2 are methyl; R 4 is —CH 2 CH 2 OH; and R 3 is hydrogen.

12. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier.

13. A composition comprising a compound of claim 1 and hydroxypropyl-β-cyclodextrin (HPβCD).

14. A method of treating cancer characterized by tumor cells with elevated NQO 1 levels comprising:

administering to a patient affected by such cancer a therapeutically effective amount of a compound of Formula (I):

R 1 , R 2 , R 3 , and R 4 are each independently —H or —X—R;

each X is independently a direct bond or a bridging group, wherein the bridging group is —O—, —S—, —NH—, —C(═O)—, —O—C(═O)—, —C(═O)—O—, —O—C(═O)—O—, or a linker of the formula —W-A-W—, wherein

each W is independently —N(R′)C(═O)—, —C(═O)N(R′)—, —OC(═O)—, —C(═O)O—, —O—, —S—, —S(O)—, —S(O) 2 —, —N(R′)—, —C(═O)—, —(CH 2 ) n — where n is 1-10, or a direct bond, wherein each R′ is independently H, (C1-C6)alkyl, or a nitrogen protecting group; and

each A is independently (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, (C 3 -C 8 )cycloalkyl, (C 6 -C 10 )aryl, —(OCH 2 —CH 2 ) n — where n is 1 to about 20, —C(O)NH(CH 2 ) n — wherein n is 1 to about 6,

—OP(O)(OH)O—, —OP(O)(OH)O(CH 2 ) n — wherein n is 1 to about 6, or (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, or —(OCH 2 —CH 2 ) n — interrupted between two carbons, or between a carbon and an oxygen, with a cycloalkyl, heterocycle, or aryl group;

each R is independently alkyl, alkenyl, alkynyl, heteroalkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycloalkenyl, (cycloalkyl)alkyl, (heterocycloalkyl)alkyl, (cycloalkyl)heteroalkyl, (heterocycloalkyl)heteroalkyl, aryl, heteroaryl, (aryl)alkyl, (heteroaryl)alkyl, hydrogen, hydroxy, hydroxyalkyl, alkoxy, (alkoxy)alkyl, alkenyloxy, alkynyloxy, (cycloalkyl)alkoxy, heterocycloalkyloxy, amino, alkylamino, aminoalkyl, acylamino, arylamino, sulfonylamino, sulfinylamino, —COR x , —COOR x ,

—CONHR x , —NHCOR x , —NHCOOR x , —NHCONHR x , —N 3 , —CN, —NC, —NCO, —NO 2 , —SH, -halo, alkoxycarbonyl, alkylaminocarbonyl, sulfonate, sulfonic acid, alkylsulfonyl, alkylsulfinyl, arylsulfonyl, arylsulfinyl, aminosulfonyl, R x S(O)R 3 —, R x S(O) 2 R y —, R x C(O)N(R x )R y —, R x SO 2 N(R x )R y —, R x N(R x )C(O)R y —, R x N(R x )SO 2 R y —, R x N(R x )C(O)N(R x )R y —, carboxaldehyde, acyl, acyloxy, —OPO 3 H 2 , —OPO 3 Z 2 where Z is an inorganic cation, or saccharide; where each R x is independently H, OH, alkyl or aryl, and each R y is independently a group W;

wherein any alkyl or aryl can be optionally substituted with one or more hydroxy, amino, cyano, nitro, or halo groups; or a salt or solvate thereof;

provided that when R 1 , R 2 , and R 3 are methyl, R 4 is not H or methyl;

wherein the cancer cells are treated, killed, or inhibited from growing.

15. The method of claim 14 wherein the cancer cells are malignant.

16. The method of claim 15 wherein the malignant cancer cells are Non-Small-Cell Lung Carcinoma.

17. A method of treating a cancer cell having an elevated NQO1 level comprising:

exposing the cancer cell to a therapeutically effective amount of a compound of claim 1 , wherein the cancer cell is treated, killed, or inhibited from growing.

18. The method of claim 14 wherein the cancer cells are in the form of a solid tumor.

19. A compound of the Formula (I):

wherein

R 4 is —X—R;

X is a bridging group, wherein the bridging group is —C(═O)—, —C(═O)—O—, or a linker of the formula —W-A-W—, wherein

each W is independently —N(R′)C(═O)—, —C(═O)N(R′)—, —C(═O)O—, —S(O)—, —S(O) 2 —, —N(R′)—, —C(═O)—, —(CH 2 ) n — where n is 1-10, or a direct bond, wherein each R′ is independently H, (C 1 -C 6 )alkyl, or a nitrogen protecting group; and

A is (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, (C 3 -C 8 )cycloalkyl, (C 6 -C 10 )aryl, —(OCH 2 —CH 2 ) n — where n is 1 to about 20, —C(O)NH(CH 2 ) n — wherein n is 1 to about 6, —OP(O)(OH)O—, —OP(O)(OH)O(CH 2 ) n — wherein n is 1 to about 6, or (C 1 -C 20 )alkyl, (C 2 -C 16 )alkenyl, (C 2 -C 16 )alkynyl, or —(OCH 2 —CH 2 ) n — interrupted between two carbons, or between a carbon and an oxygen, with a cycloalkyl, heterocycle, or aryl group;

R is alkyl, alkenyl, alkynyl, heteroalkyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycloalkenyl, (cycloalkyl)alkyl, (heterocycloalkyl)alkyl, (cycloalkyl)heteroalkyl, (heterocycloalkyl)heteroalkyl, aryl, heteroaryl, (aryl)alkyl, (heteroaryl)alkyl, hydrogen, hydroxy, hydroxyalkyl, alkoxy, (alkoxy)alkyl, alkenyloxy, alkynyloxy, (cycloalkyl)alkoxy, heterocycloalkyloxy, amino, alkylamino, aminoalkyl, acylamino, arylamino, sulfonylamino, sulfinylamino, —COR x , —COOR x , —CONHR x , —NHCOR x , —NHCOOR x , —NHCONHR x , —N 3 , —CN, —NC, —NCO, —NO 2 , —SH, -halo, alkoxycarbonyl, alkylaminocarbonyl, sulfonate, sulfonic acid, alkylsulfonyl, alkylsulfinyl, arylsulfonyl, arylsulfinyl, aminosulfonyl, R x S(O)R y —, R x S(O) 2 R y —, R x C(O)N(R x )R y —, R x SO 2 N(R x )R y —, R x N(R x )C(O)R y —, R x N(R x )SO 2 R y —, R x N(R x )C(O)N(R x )R y —, carboxaldehyde, acyl, acyloxy, —OPO 3 H 2 , —OPO 3 Z 2 where Z is an inorganic cation, or saccharide; where each R x is independently H, OH, alkyl or aryl, and each R y is independently a group W;

wherein any alkyl or aryl can be optionally substituted with one or more hydroxy, amino, cyano, nitro, or halo groups;

or a salt or solvate thereof.

20. The compound of claim 19 wherein the compound is:

or a salt or solvate thereof.

Assignments (3)
CONFIRMATORY LICENSE Recorded Apr 2, 2018
From: UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 045803/0620 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 10, 2014
From: HERGENROTHER, PAUL J.; BAIR, JOSEPH S.; PALCHAUDHURI, RAHUL; PARKINSON, ELIZABETH I.
To: THE BOARD OF TRUSTEES OF THE UNIVERSITY OF ILLINOIS
Reel/Frame 033931/0944 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 10, 2014
From: BOOTHMAN, DAVID A.
To: THE BOARD OF REGENTS OF THE UNIVERSITY OF TEXAS SYSTEM
Reel/Frame 033931/0959 →
Continuity (3)
Provisional Application 61547166 · Oct 14, 2011
Provisional Application 61662163 · Jun 20, 2012
Related Publication 20150011509A1 · Jan 8, 2015