Undifferentiated cell detection method and complex carbohydrate detection method
An object of the present invention is to provide a method for evaluating a differentiation status of cells using a culture supernatant of stem cells. Provided is “undifferentiation sugar chain marker” composed of the sugar chain structure “Fucα1-2Galβ1-3GlcNAc” or “Fucα1-2Galβ1-3GalNAc” and capable of sensitively determining the undifferentiated state of stem cells using a culture supernatant of stem cells. Also found is BC2LCN lectin or a modified product thereof capable of sensitively recognizing the “undifferentiation sugar chain marker” as excellent “probe for detecting the undifferentiation sugar chain marker” capable of determining the undifferentiation status of cells using a culture supernatant.
1. A method of determining whether stem cells in a culture are completely differentiated or not, comprising:
(1) obtaining a culture supernatant from the culture of the stem cells; and
(2) measuring the presence or absence of an undifferentiation sugar chain marker represented by:
(i) formula 1:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule, or
(ii) formula 2:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule,
in the culture supernatant, in comparison to a culture supernatant from a completely differentiated stem cell negative control,
wherein the presence or absence of the undifferentiation sugar chain marker is measured using a recombinant recognition protein comprising the amino acid sequence consisting of SEQ ID NO: 1 or the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizing the sugar chain structure represented by the formula 1 or 2.
2. The method according to claim 1 , wherein the culture supernatant is a culture supernatant of which the stem cells have been subjected to a differentiation induction treatment.
3. The method according to claim 1 , comprising measuring the presence or absence of the undifferentiation sugar chain marker represented by the formula 1 and/or 2 derived from podocalyxin.
4. The method according to claim 1 , comprising detecting the undifferentiation sugar chain marker by a lectin-lectin sandwich method using the recombinant recognition protein.
5. A method for obtaining completely differentiated stem cells in a culture, the method comprising:
(1) subjecting the culture of stem cells to a differentiation induction treatment;
(2) obtaining a culture supernatant from the culture of the stem cells;
(3) detecting to confirm the absence of an undifferentiation sugar chain marker represented by:
(i) formula 1:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule, or
(ii) formula 2:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule,
in the culture supernatant, in comparison to a culture supernatant of a completely differentiated stem cell negative control; and
(4) collecting the differentiated cells from the culture following confirmation of the absence of the undifferentiated sugar chain marker from the culture supernatant,
wherein the confirmation of the absence of the undifferentiation sugar chain marker indicates complete differentiation of all cells in the culture; and
wherein the confirmation of the absence of the undifferentiation sugar chain marker is made using a recombinant recognition protein comprising the amino acid sequence consisting of SEQ ID NO: 1 or the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizing the sugar chain structure represented by the formula 1 or 2.
6. The method according to claim 1 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.
7. The method according to claim 1 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.
8. The method according to claim 5 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.
9. The method according to claim 5 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.
10. A method for determining a degree of differentiation of stem cells in a culture, comprising:
(1) obtaining a culture supernatant from the culture of the stem cells; and
(2) measuring an amount of an undifferentiation sugar chain marker represented by:
(i) formula 1:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule, or
(ii) formula 2:
wherein R1 represents an OH group or any sugar chain and R2 represents an OH group or any sugar chain, protein, lipid, or another molecule, in the culture supernatant,
wherein the amount of the undifferentiation sugar chain marker is measured using a recombinant recognition protein comprising the amino acid sequence consisting of SEQ ID NO: 1 or the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizing the sugar chain structure represented by the formula 1 or 2, and
wherein the measured amount is correlated to the degree of differentiation based on a standard curve.
11. The method according to claim 10 , wherein the culture supernatant is a culture supernatant of which the stem cells have been subjected to a differentiation induction treatment.
12. The method according to claim 10 , comprising measuring the amount of the undifferentiation sugar chain marker represented by the formula 1 and/or 2 derived from podocalyxin.
13. The method according to claim 10 , comprising detecting the undifferentiation sugar chain marker by a lectin-lectin sandwich method using the recombinant recognition protein.
14. The method according to claim 10 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.
15. The method according to claim 10 , wherein the recombinant recognition protein comprises the amino acid sequence consisting of SEQ ID NO: 1 in which one amino acid is deleted, substituted, inserted, or added, and specifically recognizes the sugar chain structure represented by the formula 1 or 2.