Lipocalin fusion partners
Methods and systems for producing fusion proteins and peptides are disclosed. Fusion proteins and peptides created using the methods are also provided. Also provided are methods of using the fusion proteins and peptides produced according to the present disclosure.
1. A method for producing a fusion protein, the method comprising:
expressing, in a cell, a fusion protein, the fusion protein comprising:
a knotted-peptide selected from PMP-D2, potato carboxypeptidase inhibitor, huwentoxin, imperatoxin, epiregulin, midkine, bubble protein and conotoxin CIVC; and
a siderocalin protein selected from human siderocalin, murine siderocalin, chicken Ex-FABP, and quail Q83, thereby producing the fusion protein.
2. The method of claim 1 , further comprising separating the knotted-peptide from the siderocalin protein.
3. The method of claim 2 , wherein the fusion protein further comprises a cleavage site.
4. The method of claim 3 , wherein the cleavage site is a furin cleavage site, a trypsin cleavage site, or a TEV cleavage site.
5. The method of claim 3 , wherein the separating of the knotted-peptide from the siderocalin protein results from cleavage at the cleavage site in the fusion protein.
6. The method of claim 2 , wherein the separating of the knotted-peptide from the siderocalin protein occurs following secretion of the fusion protein from the cell.
7. The method of claim 6 , wherein the cell is a mammalian cell.
8. The method of claim 1 , wherein the fusion protein comprises the following construct: IgK starter sequence-signal sequence-sFLAG-HIS6 (SEQ ID NO: 93)-siderocalin protein-TEV cleavage site-knotted peptide.
9. A composition comprising a fusion protein, the fusion protein comprising:
a knotted-peptide selected from PMP-D2, potato carboxypeptidase inhibitor, huwentoxin, imperatoxin, epiregulin, midkine, bubble protein and conotoxin CIVC; and
a siderocalin protein selected from human siderocalin, murine siderocalin, chicken Ex-FABP, and quail Q83.
10. The composition of claim 9 , wherein the fusion protein further comprises at least one of an IgK starter sequence, a sFLAG, a HIS6(SEQ ID NO: 93), or a TEV cleavage site.
11. The composition of claim 9 , wherein the fusion protein is generated by direct fusion of the knotted-peptide to the siderocalin protein.
12. The composition of claim 9 , further comprising a linker sequence between the knotted-peptide peptide and the siderocalin protein.
13. The method of claim 1 , further comprising loading the siderocalin protein with a ligand.
14. The method of claim 13 , wherein the ligand comprises a chemotherapeutic or radioactive agent.
15. The composition of claim 1 , further comprising a cleavage site between the knotted-peptide and the siderocalin protein.
16. The composition of claim 15 , wherein the cleavage site is a furin cleavage site, a trypsin cleavage site, or a TEV cleavage site.
17. The composition of claim 9 , wherein the siderocalin protein is loaded with a ligand.
18. The composition of claim 17 , wherein the ligand comprises a chemotherapeutic or radioactive agent.
19. The method of claim 1 , wherein the siderocalin protein is human siderocalin having a C87S mutation.
20. The method of claim 1 , wherein the siderocalin protein is human siderocalin having a C87S mutation, an 18C mutation and a N39C mutation.
21. The composition of claim 9 , wherein the siderocalin protein is human siderocalin having a C87S mutation.
22. The composition of claim 9 , wherein the siderocalin protein is human siderocalin having a C87S mutation, an 18C mutation and a N39C mutation.