Methods of detecting prostate cancer
The invention described herein provides biological markers for the diagnosis, prognosis, and monitoring of prostate cancer.
1. A method for measuring the level of a marker in a sample from a subject, the method comprising the steps of:
a) measuring the levels of two to five markers selected from the group consisting of P2RY10, TNFAIP3, CXCR1, DNAJB1, and CHI3L1 in a population of the subject's macrophage cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before a treatment for prostate cancer, or at a first time point, or before administering a compound to the subject, respectively; b) measuring the levels of the two to five selected markers in a population of the subject's T-cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before the treatment, or at a first time point, or before administering the compound to the subject, respectively;
c) measuring the levels of the two to five selected markers in a population of the subject's macrophage cells after the treatment, or at a second time point, or after the administration of the compound, respectively; and
d) measuring the levels of the two to five selected markers in a population of the subject's T-cells after the treatment, or at a second time point, or after the administration of the compound, respectively.
2. A method for measuring the level of a marker in sample from a subject, the method comprising the steps of:
a) measuring the levels of two to seven markers selected from the group consisting of EIF3S5, EEF1A1, RPL14, RPL23A, RPL3, RPS28, and PTMA in a population of the subject's neutrophil cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before a treatment for prostate cancer, or at a first time point, or before administering a compound to the subject, respectively;
b) measuring the levels of the two to seven selected markers in a population of the subject's T-cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before the treatment, or at a first time point, or before administering the compound to the subject, respectively;
c) measuring the levels of the two to seven selected markers in a population of the subject's neutrophil cells after the treatment, or at a second time point, or after the administration of the compound, respectively; and
d) measuring the levels of the two to seven selected markers in a population of the subject's T-cells after the treatment, or at a second time point, or after the administration of the compound, respectively.
3. A method for measuring the level of a marker in sample from a subject, the method comprising the steps of:
a) measuring the levels of two to five first markers selected from the group consisting of P2RY10, TNFAIP3, CXCR1, DNAJB1, and CHI3L1 in a population of the subject's macrophage cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before a treatment for prostate cancer, or at a first time point, or before administering a compound to the subject, respectively, and measuring the levels of two to seven second markers selected from the group consisting of EIF3S5, EEF1A1, RPL14, RPL23A, RPL3, RPS28, and PTMA in a population of the subject's neutrophil cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before a treatment for prostate cancer, or at a first time point, or before administering a compound to the subject, respectively;
b) measuring the levels of the two to five selected first markers in a population of the subject's T-cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before the treatment, or at a first time point, or before administering the compound to the subject, respectively; and measuring the levels of the two to seven selected second markers in a population of the subject's T-cells using an assay selected from the group consisting of an amplification assay, a sequencing assay, and an immunoassay before the treatment, or at a first time point, or before administering the compound to the subject, respectively;
c) measuring the levels of the two to five selected first marker in a population of the subject's macrophage cells after the treatment, or at a second time point, or after the administration of the compound, respectively, and measuring the levels of the two to seven selected second marker in a population of the subject's neutrophil cells after the treatment, or at a second time point, or after the administration of the compound, respectively; and
d) measuring the levels of the two to five selected first markers in a population of the subject's T-cells after the treatment, or at a second time point, or after the administration of the compound, respectively; and
measuring the levels of the two to seven selected second markers in a population of the subject's T-cells after the treatment, or at a second time point, or after the administration of the compound, respectively.
4. The method of claim 1 , further comprising measuring at least one standard parameter associated with prostate cancer.
5. The method of claim 4 , wherein the standard parameter is selected from the group consisting of tumor stage, tumor grade, tumor size, tumor visual characteristics, tumor growth, tumor thickness, tumor progression, tumor metastasis tumor distribution within the body, odor, molecular pathology, genomics, or tumor angiograms.