IP Library Granted Patent US 9,775,845
Granted Patent B2
US 9,775,845 · App. 14/994,005 · Granted Oct 3, 2017

Carbazole-containing sulfonamides as cryptochrome modulators

Inventors: Ross Bersot (Orinda, CA); Paul Humphries (Santa Clara, CA)
Assignee: Reset Therapeutics, Inc.
A61K31/549A61K31/403A61K31/404A61K31/4155A61K31/427A61K31/428A61K31/454A61K31/541A61K31/5415A61K45/06C07D209/86C07D209/88C07D401/06C07D401/12C07D403/06C07D403/12C07D405/12C07D405/14C07D409/12C07D413/12C07D417/06C07D493/08G01N33/6893G01N2333/47G01N2800/52
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Quick Facts
Patent No.
US 9,775,845
App. No.
14/994,005
Granted
Oct 3, 2017
Kind
B2
Abstract

The subject matter herein is directed to carbazole-containing sulfonamide derivatives and pharmaceutically acceptable salts or hydrates thereof of structural formula I wherein the variable R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , R 7 , A, B, C′, D, E, F, G, H′, a, and b are accordingly described. Also provided are pharmaceutical compositions comprising the compounds of formula I to treat a Cry-mediated disease or disorder, such as diabetes, obesity, metabolic syndrome, Cushing's syndrome, and glaucoma.

Claims (40)

1. A compound of formula I

or an enantiomer thereof, or a pharmaceutically acceptable salt or hydrate thereof, wherein

each of A, B, C′, D, E, F, G, and H′ is carbon;

each of R 1 and R 2 , is independently selected from the group consisting of hydrogen, halogen, cyano, nitro, —CF 3 , —CHF 2 , —CH 2 F, trifluoromethoxy, azido, hydroxyl, (C 1 -C 6 )alkoxy, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —O—(C═O)—R 8 , —NR 8 (C═O)—R 10 , —(C═O)—NR 8 R 9 , —NR 8 R 9 , —NR 8 OR 9 , —S(O) c NR 8 R 9 , —S(O) d (C 1 -C 8 )alkyl, —O—SO 2 —R 8 , —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl;

each of R 3 and each of R 5 is independently selected from the group consisting of hydrogen, cyano, —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —(C═O)—NR 8 R 9 , —S(O) c NR 8 R 9 , —S(O) d (C 1 -C 8 )alkyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl;

wherein each of the R 3 groups are optionally linked to each other as a 4-12 membered mono- or bicyclic ring;

wherein each of the R 5 groups are optionally linked to each other as a 4-12 membered mono- or bicyclic ring;

R 4 is selected from the group consisting of hydrogen, —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —(C═O)—NR 8 R 9 , —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl;

R 6 is selected from the group consisting of hydrogen, —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —(C═O)—NR 8 R 9 , —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl;

wherein one R 5 group and R 6 are optionally linked to each other as a 4-12 membered mono- or bicyclic ring;

R 7 is selected from the group consisting of —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —NR 8 (C═O)—R 10 , —(C═O)—NR 8 R 9 , —NR 8 R 9 , —NR 8 OR 9 , —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d S(CR 8 R 9 ) e (4-10)-membered heterocyclyl;

R 6 and R 7 can be linked to each other as a 4-12 membered mono- or bicyclic ring optionally substituted with 1 or more halogen, (C 1 -C 6 )alkyl, (C 1 -C 6 )alkoxy, or (3-10)-membered cycloalkyl;

each of R 8 , R 9 and R 10 are independently selected from the group consisting of hydrogen, (C 1 -C 6 )alkyl, —(CR 11 R 12 ) e (3-10)-membered cycloalkyl, —(CR 11 R 12 ) g (C 6 -C 10 )aryl, and —(CR 11 R 12 ) g (4-10)-membered heterocyclyl;

any carbon atoms of the (C 1 -C 6 )alkyl, the (3-10)-membered cycloalkyl, the (C 6 -C 10 )aryl and the (4-10)-membered heterocyclyl of the foregoing R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , R 7 , R 8 , R 9 , R 10 , R 11 , R 12 , R 13 , R 15 , and R 16 are independently optionally substituted with 1 to 3 R 14 substituents each independently selected from the group consisting of halogen, cyano, nitro, —CF 3 , —CHF 2 , —CH 2 F, trifluoromethoxy, azido, hydroxyl, —O—R 15 , (C 1 -C 6 )alkoxy, —(CR 8 R 9 ) e (C 1 -C 6 )alkoxy, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 11 , —(C═O)—R 15 , —(C═O)—O—R 11 , —(C═O)—O—R 15 , —O—(C═O)—R 11 , —O—(C═O)—R 15 , —NR 11 (C═O)—R 13 , —(C═O)—NR 11 R 12 , —(C═O)—NR 11 R 15 , —NR 11 R 12 , —NR 11 R 15 , —NR 11 OR 12 , —NR 11 OR 15 , —S(O) c NR 11 R 12 , —S(O) c NR 11 R 15 , —S(O) d (C 1 -C 6 )alkyl, —S(O) d R 15 , —O—SO 2 —R 11 , —O—SO 2 —R 15 , —(CR 11 R 12 ) e (3-10)-membered cycloalkyl, —(CR 11 R 12 ) e (C 6 -C 10 )aryl, —(CR 11 R 12 ) e (4-10)-membered heterocyclyl, —(CR 11 R 12 ) f (C═O)(CR 11 R 12 ) e (C 6 -C 10 )aryl, —(CR 11 R 12 ) f (C═O)(CR 11 R 12 ) e (4-10)-membered heterocyclyl, —(CR 11 R 12 ) e O(CR 11 R 12 ) f (C 6 -C 10 )aryl, —(CR 11 R 12 ) e O(CR 11 R 12 ) f (4-10)-membered heterocyclyl, —(CR 11 R 12 ) f S(O) d (CR 11 R 12 ) e (C 6 -C 10 )aryl, and —(CR 11 R 12 ) f S(O) d (CR 11 R 12 ) e (4-10)- membered heterocyclyl;

any carbon atoms of the (C 1 -C 6 )alkyl, the (3-10)-membered cycloalkyl, the (C 6 -C 10 )aryl and the (4-10)-membered heterocyclyl of the foregoing R 14 are independently optionally substituted with 1 to 3 R 16 substituents each independently selected from the group consisting of halogen, cyano, nitro, —CF 3 , —CHF 2 , —CH 2 F, trifluoromethoxy, azido, (CH 2 ) e OH, (C 1 -C 6 )alkoxy, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 11 , —(C═O)—R 15 , —(C═O)—O—R 11 , —(C═O)—O—R 15 , —O—(C═O)—R 11 , —O—(C═O)—R 15 , —NR 11 (C═O)—R 13 , —(C═O)—NR 11 R 12 , —NR 11 R 12 , and —NR 11 R 15 ;

any nitrogen atoms of the (4-10)-membered heterocyclyl of the foregoing R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , R 7 , R 8 , R 9 , R 10 , R 14 , and R 15 are independently optionally substituted with (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 11 , —(C═O)—O—R 11 , —(C═O)—NR 11 R 12 , —(CR 11 R 12 ) e (3-10)- membered cycloalkyl, —(CR 11 R 12 ) e (C 6 -C 10 )aryl, —(CR 11 R 12 ) f (4-10)-membered heterocyclyl, —(CR 11 R 12 ) f (C═O)(CR 11 R 12 ) e (C 6 -C 10 )aryl, or —(CR 11 R 12 ) f (C═O)(CR 11 R 12 ) e (4-10)-membered heterocyclyl;

each R 11 , R 12 , and R 13 are independently hydrogen or (C 1 -C 6 )alkyl;

R 15 is —(CR 11 R 12 ) e (3-10)-membered cycloalkyl, —(CR 11 R 12 ) e (C 6 -C 10 )aryl, or —(CR 11 R 12 ) e (4-10)-membered heterocyclyl;

a and b are each independently 1, 2, 3, or 4;

c is 1 or 2;

d is 0, 1, or 2; and

e, f, and g are each independently 0, 1, 2, 3, 4, or 5,

and wherein when R 7 is (C 1 -C 6 )alkyl, R 6 is selected from the group consisting of —CF 3 , —CHF 2 , —CH 2 F, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(C═O)—R 8 , —(C═O)—O—R 8 , —(C═O)—NR 8 R 9 , —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (4-10)-membered non-aromatic heterocyclyl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) f (C═O)(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, and —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl, and wherein the (3-10)-membered cycloalkyl of the (CR 8 R 9 ) d (3-10)-membered cycloalkyl is optionally substituted with one or more halogen, CF 3 , CN, (C 1 -C 6 )alkyl, or (C 1 -C 6 )alkoxy.

2. The compound according to claim 1 , wherein each of R 1 and R 2 is independently selected from hydrogen or halogen; R 4 is hydrogen or (C 1 -C 6 )alkyl; R 3 and R 5 are hydrogen; R 6 is —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, or —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl; R 7 is —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, or —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl.

3. The compound according to claim 1 , wherein each of R 1 and R 2 is independently selected from hydrogen or halogen; R 4 is hydrogen or (C 1 -C 6 )alkyl; R 3 and R 5 are hydrogen; R 6 and R 7 are linked to each other as a 4-12 membered mono- or bicyclic ring optionally substituted with 1 or more halogen, (C 1 -C 6 )alkyl, (C 1 -C 6 )alkoxy, or (3-10)-membered cycloalkyl.

4. The compound according to claim 1 , wherein each of R 1 and R 2 is independently selected from hydrogen or halogen; R 4 is hydrogen or (C 1 -C 6 )alkyl; R 3 and one R 5 are hydrogen; one R 5 and R 6 are linked to each other as a 4-12 membered mono- or bicyclic ring; R 7 is —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, or —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl.

5. The compound according to claim 1 wherein the compound is the single enantiomer bearing an (S)-configuration at C-3; each of R 1 and R 2 is independently selected from hydrogen or halogen; R 4 is hydrogen or (C 1 -C 6 )alkyl, R 3 and R 5 are hydrogen; R 6 is —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (C 6 -C 10 )aryl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, or —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl; R 7 is —CF 3 , —CHF 2 , —CH 2 F, (C 1 -C 6 )alkyl, (C 2 -C 6 )alkenyl, (C 2 -C 6 )alkynyl, —(CR 8 R 9 ) d (3-10)-membered cycloalkyl, —(CR 8 R 9 ) e (4-10)-membered heterocyclyl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (C 6 -C 10 )aryl, —(CR 8 R 9 ) e O(CR 8 R 9 ) f (4-10)-membered heterocyclyl, —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (C 6 -C 10 )aryl, or —(CR 8 R 9 ) f S(O) d (CR 8 R 9 ) e (4-10)-membered heterocyclyl.

6. The compound according to claim 1 , wherein the compound is the single enantiomer bearing an (S)-configuration at C-3; each of R 1 and R 2 is independently selected from hydrogen or halogen; R 4 is hydrogen or (C 1 -C 6 )alkyl; R 3 and R 5 are hydrogen; R 6 and R 7 are linked to each other as a 4-12 membered mono- or bicyclic ring optionally substituted with 1 or more halogen, (C 1 -C 6 )alkyl, (C 1 -C 6 )alkoxy, or (3-10)-membered cycloalkyl.

7. The compound according to claim 1 , wherein said compound modulates Cry1 or Cry2.

8. The compound according to claim 7 , wherein said modulation comprises any one of the following:

(i) binding to Cry1 or Cry2;

(ii) inhibiting modification of Cry1 or Cry2;

(iii) altering Cry1 or Cry2 localization;

(iv) increasing or decreasing Cry1 or Cry2 stabilization;

(v) increasing or decreasing the binding between Cry1 or Cry2 to a target;

(vi) increasing or decreasing Cry1 or Cry2 activity; and

(vii) increasing or decreasing activity of a Cry1 or Cry2 target.

9. The compound according to claim 8 , wherein said target is Per1, Per2, glucocorticoid receptor (GR), CLOCK, BMAL1, or a CLOCK-BMAL1 promoter sequence.

10. A pharmaceutical composition comprising a compound according to claim 1 , or a pharmaceutically acceptable salt or hydrate thereof, and a pharmaceutically acceptable carrier, adjuvant, or diluent.

11. The pharmaceutical composition according to claim 10 , further comprising one or more additional therapeutic agents.

Assignments (2)
CHANGE OF NAME Recorded Jan 14, 2019
From: RESET THERAPEUTICS, INC.
To: SYNCHRONICITY PHARMA, INC.
Reel/Frame 048068/0804 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 9, 2016
From: BERSOT, ROSS; HUMPHRIES, PAUL
To: RESET THERAPEUTICS, INC.
Reel/Frame 038520/0089 →
Continuity (4)
Continuation 13891407 · May 10, 2013
Provisional Application 61645918 · May 11, 2012
Provisional Application 61778176 · Mar 12, 2013
Related Publication 20160200732A1 · Jul 14, 2016