IP Library Granted Patent US 9,707,234
Granted Patent B2
US 9,707,234 · App. 15/105,376 · Granted Jul 18, 2017

Spirocyclic hetercycle compounds useful as HIV integrase inhibitors

Inventors: Thomas H. Graham (Scotch Plains, NJ); Wensheng Liu (Edison, NJ); Tao Yu (Edison, NJ); Yonglian Zhang (Metuchen, NJ); Sherman T. Waddell (Westfield, NJ); John S. Wai (Harleysville, PA); Paul J. Coleman (Harleysville, PA); John M. Sanders (Hatfield, PA); Mark W. Embrey (Harleysville, PA); Abbas M. Walji (Lansdale, PA); Ronald Dale Ferguson, II (Westfield, NJ); Christine Ng Di Marco (Conshohocken, PA); Thomas G. Steele (Schwenksville, PA); Lihong Hu (Shanghai, CN); Xuanjia Peng (Shanghai, CN)
Assignee: Merck Sharp & Dohme Corp.
A61K31/53A61K31/427A61K31/499A61K31/513A61K31/52A61K31/55A61K31/675A61K45/06C07D471/20C07D471/22C07D475/10C07D491/10C07D491/20C07D495/10C07D495/20C07F9/65616
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Quick Facts
Patent No.
US 9,707,234
App. No.
15/105,376
Granted
Jul 18, 2017
Kind
B2
Abstract

The present invention relates to Spirocyclic Heterocycle Compounds of Formula (I): and pharmaceutically acceptable salts thereof, wherein A, B, X, Y, R 1 , R 2 and R 11 are as defined herein. The present invention also relates to compositions comprising at least one Spirocyclic Heterocycle Compound, and methods of using the Spirocyclic Heterocycle Compounds for treating or preventing HIV infection in a subject.

Claims (68)

1. A compound having the formula:

or a pharmaceutically acceptable salt or prodrug thereof,

wherein:

A is —NHC(O)—;

B is a 3 to 8-membered heterocycloalkyl or an 8 to 14 membered bicyclic heterocycloalkyl, each of which can be optionally be substituted with one or more groups, each independently selected from R 7 ;

X is C 1 -C 3 alkylene;

Y is —C(R 3 ) 2 — or —N(R 4 )—;

R 1 is selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, —(C 1 -C 4 alkylene)-O—(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-S—(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-SO 2 —(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-N—(C 1 -C 6 alkyl) 2 , —(C 1 -C 6 alkylene) p -P(O)(—OR 10 ) 2 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, phenyl, 3 to 8-membered monocyclic heterocycloalkyl and 5 or 6-membered monocyclic heteroaryl;

R 2 represents up to 3 optional substitutents, each independently selected from halo, C 1 -C 6 alkyl, —O—(C 1 -C 6 alkyl) and C 1 -C 6 haloalkyl;

each occurrence of R 3 is independently selected from H, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, —(C 1 -C 4 alkylene) p -(5 or 6-membered monocyclic heteroaryl), —(C 1 -C 4 alkylene) p -(phenyl), C 3 -C 7 cycloalkyl, —(C 1 -C 6 alkylene) p -P(O)(—OR 10 ) 2 , —(C 1 -C 4 alkylene)-S—(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-SO 2 —(C 1 -C 6 alkyl), —N(R 6 )C(O)R 5 , —(C 1 -C 4 alkylene)-N—(C 1 -C 6 alkyl) 2 and 3 to 8-membered monocyclic heterocycloalkyl;

R 4 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —SO 2 R 5 , —C(O)R 5 , —(C 1 -C 6 alkylene) p -C(O)N(R 6 ) 2 , —(C 1 -C 6 alkylene) p -P(O)(—OR 10 ) 2 , —N(R 6 )C(O)R 5 , —(C 2 -C 4 alkylene)-O—(C 1 -C 6 alkyl), —(C 2 -C 4 alkylene)-S—(C 1 -C 6 alkyl), —(C 2 -C 4 alkylene)-SO 2 —(C 1 -C 6 alkyl), —(C 2 -C 4 alkylene)-N—(C 1 -C 6 alkyl) 2 , —(C 1 -C 6 alkylene) p -(C 3 -C 7 cycloalkyl), —(C 1 -C 4 alkylene) p -(5 or 6-membered monocyclic heteroaryl), —(C 1 -C 4 alkylene) p -(8 to 10-membered bicyclic heteroaryl), —(C 1 -C 4 alkylene) p -(phenyl) and 4 to 8-membered monocyclic heterocycloalkyl;

each occurrence of R 5 is independently selected from C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 3 -C 7 cycloalkyl, phenyl, 3 to 8-membered monocyclic heterocycloalkyl or 6-membered monocyclic heteroaryl and 8 to 10-membered bicyclic heteroaryl, wherein said C 3 -C 7 cycloalkyl group, said phenyl group, said 5 or 6-membered monocyclic heteroaryl group and said 8 to 10-membered bicyclic heteroaryl group can be optionally substituted with one or more groups, each independently selected from R 7 ;

each occurrence of R 6 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, —(C 1 -C 6 alkylene)-N(R 8 ) 2 , C 1 -C 6 haloalkyl, —C(O)O(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -R 9 and —(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl);

each occurrence of R 7 is independently selected from halo, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, 3 to 8-membered monocyclic heterocycloalkyl, 6 to 10-membered bicyclic heterocycloalkyl, 5 or 6-membered monocyclic heteroaryl, —O—(C 1 -C 6 alkyl), —O—(C 6 -C 10 aryl), —O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —O—(C 1 -C 6 haloalkyl), —O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —NH 2 , —NH(C 1 -C 6 alkyl), —N(C 1 -C 6 alkyl) 2 , —S(O) 2 (C 1 -C 6 alkyl), —NHS(O) 2 —(C 1 -C 6 alkyl), —S(O) 2 NH—(C 1 -C 6 alkyl), —S(O) 2 N(C 1 -C 6 alkyl) 2 , —OC(O)—(C 1 -C 6 haloalkyl), —C(O)O-benzyl, —(C 1 -C 6 alkylene) p -C(O)O—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -C(O)—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -C(O)N(R 8 ) 2 , C 1 -C 6 hydroxyalkyl, —P(O)(OR 10 ) 2 , and —CN;

each occurrence of R 8 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, C 1 -C 6 haloalkyl, —C(O)O(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -R 9 and —(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl);

each occurrence of R 9 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, 5 or 6-membered monocyclic heteroaryl and 3 to 8-membered monocyclic heterocycloalkyl;

each occurrence of R 10 is independently selected from H and C 1 -C 6 alkyl;

R 11 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 hydroxyalkyl, —O—(C 1 -C 6 alkyl), C 3 -C 7 cycloalkyl and —(C 1 -C 4 alkylene)-O—(C 1 -C 6 alkyl); and

each occurrence of p is independently 0 or 1.

2. The compound of claim 1 , wherein X is —CH 2 —, or a pharmaceutically acceptable salt or prodrug thereof.

3. The compound of claim 1 , wherein R 11 is H or —CH 2 OCH 3 —, or a pharmaceutically acceptable salt or prodrug thereof.

4. The compound of claim 1 having the formula:

or a pharmaceutically acceptable salt thereof,

wherein:

A is —NHC(O)—;

B is a 5 or 6-membered heterocycloalkyl;

Y is —CH 2 — or —N(CH 3 )—;

R 1 is selected from C 1 -C 6 alkyl and —(C 2 -C 4 alkylene)-O—(C 1 -C 6 alkyl); and

R 2 represents up to 3 optional substituents, each independently selected from halo.

5. The compound of claim 1 , wherein Y is —CH 2 — or —N(CH 3 ), or a pharmaceutically acceptable salt or prodrug thereof.

6. A compound

having the formula:

or a pharmaceutically acceptable salt or prodrug thereof,

wherein:

A is

B is a 3 8-membered heterocycloalkyl or an 8 to 14 membered bicyclic heterocycloalkyl, each of which can be optionally be substituted with one or more groups, each independently selected from R 7 ;

X is C 1 -C 3 alkylene;

Y is —N(R 4 )—;

R 1 is selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, —(C 1 -C 4 alkylene)-O—(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-S—(C 1 -C 6 alkyl), —(C 1 -C 4 alkylene)-SO 2 —(C 1 -C 6 alkyl), —C 1 -C 4 alkylene)-N—(C 1 -C 6 alkyl) 2 , —(C 1 -C 6 alkylene) p -P(O)(—OR 10 ) 2 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, phenyl, 3 to 8-membered monocyclic heterocycloalkyl and 5 or 6-membered monocyclic heteroaryl;

R 2 respresents up to 3 optional subsitutents, each independetly selected from halo, C 1 -C 6 alkyl, —O—(C 1 -C 6 alkyl) and C 1 C 6 haloalkyl;

R 4 is selected from H, C 1 -C 6 alkly, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —SO 2 R 5 , —C(O)R 5 , —(C 1 -C 6 alkylene) p -C(O)N(R 6 ) 2 , —(C 1 -C 6 alkylene) p -P(O)(—OR 10 ) 2 , —N(R 6 )C(O)R 5 , —(C 2 -C 4 alkylene)-O—(C 1 -C 6 alkyl), —(C 2 -C 4 alkylene)-S—(C 1 -C 6 alkyl), —(C 2 C 4 alkylene)-SO 2 —(C 1 -C 6 alkyl), —(C 2 -C 4 alkylene)-N—(C 1 -C 6 alkyl) 2 , —(C 1 -C 6 alkylene) p —(C 3 -C 7 cycloalkyl), —(C 1 -C 4 alkylene) p -(5 or 6-membered monocyclic heteroaryl), —(C 1 -C 4 alkylene) p -(8 to 10-membered bicyclic heteroaryl), —(C 1 -C 4 alkylene) p -(phenyl) and 4 to 8 membered monocyclic heterocycloalkyl;

each occurrence of R 5 is independently selected from C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 3 -C 7 cycloalkyl, phenyl, 3 to 8-membered monocyclic heterocycloalkyl or 6-membered monocyclic heteroaryl and 8 to 10-membered bicyclic heteroaryl, wherein said C 3 -C 7 cycloalkyl group, said phenyl group, said 5 or 6-membered monocyclic heteroaryl group and said 8 to 10-membered bicyclic heteroaryl group can be optionally substituted with one or more groups, each independently selected from R 7 ;

each occurrence of R 6 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, —(C 1 -C 6 alkylene)-N(R 8 ) 2 , C 1 -C 6 haloalkyl, —C(O)O(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -R 9 and —(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl);

each occurrence of R 7 is independently selected from halo, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, 3 to 8-membered monocyclic heterocycloalkyl, 6 to 10-membered bicyclic heterocycloalkyl, 5 or 6-membered monocyclic heteroaryl, —O—(C 1 -C 6 alkyl), —O—(C 6 -C 10 aryl), —O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —O—(C 1 -C 6 haloalkyl), —O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl), —NH 2 , —NH(C 1 -C 6 alkyl), —N(C 1 -C 6 alkyl) 2 , —S(O) 2 (C 1 -C 6 alkyl), —NHS(O) 2 —(C 1 -C 6 alkyl), —S(O) 2 NH—(C 1 -C 6 alkyl), —S(O) 2 N(C 1 -C 6 alkyl) 2 , —OC(O)—(C 1 -C 6 haloalkyl), —C(O)O-benzyl, —(C 1 -C 6 alkylene) p -C(O)O—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -C(O)—(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -C(O)N(R 8 ) 2 , C 1 -C 6 hydroxyalkyl, —P(O)(OR 10 ) 2 , and —CN;

each occurrence of R 8 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, C 1 -C 6 haloalkyl, —C(O)O(C 1 -C 6 alkyl), —(C 1 -C 6 alkylene) p -R 9 and —(C 1 -C 6 alkylene)-O—(C 1 -C 6 alkyl);

each occurrence of R 9 is independently selected from H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, 5 or 6-membered monocyclic heteroaryl and 3 to 8-membered monocyclic heterocycloalkyl;

each occurrence of R 10 is independently selected from H and C 1 -C 6 alkyl;

R 11 is selected from H, C 1 -C 6 alkyl, C 1 -C 6 hydroxyalkyl, —O—(C 1 -C 6 alkyl), C 3 -C 7 cycloalkyl and —(C 1 -C 4 alkylene)-O—(C 1 -C 6 alkyl); and

each occurrence of p is independently 0 or 1.

7. The compound of claim 1 , wherein B is a 5 or 6-membered heterocycloalkyl ring, or a pharmaceutically acceptable salt or prodrug thereof.

8. The compound of claim 7 , wherein B is tetrahydrofuranyl or tetrahydropyranyl, or a pharmaceutically acceptable salt or prodrug thereof.

9. The compound of claim 7 , wherein B is piperidinyl, optionally substituted on the ring nitrogen atom with —C(O)OR 5 , —C(O)R 5 , —S(O) 2 —(C 1 -C 6 alkyl) or —S(O) 2 NH—(C 1 -C 6 alkyl), or a pharmaceutically acceptable salt or prodrug thereof.

10. The compound of claim 1 , having the formula (Ib):

or a pharmaceutically acceptable salt or prodrug thereof,

wherein:

Y is —CH 2 — or —N(CH 3 )—;

R 1 is selected from C 1 -C 6 alkyl and —(C 2 -C 4 alkylene)-O—(C 1 -C 6 alkyl); and

R 2 represents up to 3 optional substituents, each independently selected from halo.

11. The compound of claim 1 , wherein Y is —N(CH 3 )—, or a pharmaceutically acceptable salt or prodrug thereof.

12. The compound of claim 1 , wherein R 1 is selected from methyl, ethyl, n-propyl and —CH 2 CH 2 OCH 3 , or a pharmaceutically acceptable salt or prodrug thereof.

13. The compound of claim 1 , wherein R 2 represents two fluoro groups, in the ortho and para positions, or a pharmaceutically acceptable salt or prodrug thereof.

14. A compound that is

or a pharmaceutically acceptable salt thereof.

15. A pharmaceutical composition comprising an effective amount of a compound according to claim 1 , or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.

16. A method for the inhibition of HIV integrase in a subject in need thereof which comprises administering to the subject an effective amount of the compound according to claim 1 , or a pharmaceutically acceptable salt thereof.

17. A method for the treatment of infection by HIV or for the treatment, or delay in the onset or progression of AIDS in a subject in need thereof, which comprises administering to the subject an effective amount of the compound according to claim 1 , or a pharmaceutically acceptable salt thereof.

18. The pharmaceutical composition of claim 15 , further comprising one or more additional therapeutic agents selected from raltegravir, lamivudine, abacavir, ritonavir, dolutegravir, arunavir, atazanavir, emtricitabine, tenofovir, elvitegravir, rilpivirine and lopinavir.

19. The method of claim 17 , further comprising administering to the subject one or more additional therapeutic agents selected from raltegravir, abacavir, lamivudine, ritonavir and lopinavir, wherein the amounts administered of the compound of claim 1 and the one or more additional therapeutic agents, are together effective to treat infection by HIV or to treat or delay the onset or progression of AIDS.

Assignments (6)
MERGER Recorded Aug 8, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 061102/0145 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ZHANG, YONHLIAN; FERGUSONE, RONALD DALE, II PREVIOUSLY RECORDED ON REEL 038934 FRAME 0297. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jul 28, 2016
From: GRAHAM, THOMAS H.; LIU, WENSHENG; YU, TAO; ZHANG, YONGLIAN; WADDELL, SHERMAN T.; WAI, JOHN S.; COLEMAN, PAUL J.; SANDERS, JOHN M.; EMBREY, MARK W.; WALJI, ABBAS M.; FERGUSON, RONALD DALE, II; DI MARCO, CHRISTINA NG; STEELE, THOMAS G.
To: MERCK SHARP & DOHME
Reel/Frame 039503/0119 →
CORRECTIVE ASSIGNMENT TO CORRECT THE YONHLIAN ZHANG; RONALD D. FERGUSONE II PREVIOUSLY RECORDED ON REEL 038934 FRAME 0297. ASSIGNOR(S) HEREBY CONFIRMS THE YONGLIAN ZHANG; RONALD D. FERGUSON II. Recorded Jul 28, 2016
From: GRAHAM, THOMAS H.; LIU, WENSHENG; YU, TAO; ZHANG, YONGLIAN; WADDELL, SHERMAN T.; FERGUSON, RONALD DALE, II; STEELE, THOMAS G.; WAI, JOHN S.; DI MARCO, CHRISTINA NG; COLEMAN, PAUL J.; SANDERS, JOHN M.; EMBREY, MARK W.
To: MERCK SHARP & DOHME
Reel/Frame 039937/0662 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 16, 2016
From: GRAHAM, THOMAS H.; LIU, WENSHENG; YU, TAO; ZHANG, YONHLIAN; WADDELL, SHERMAN T.; FERGUSONE, RONALD DALE, II; WAI, JOHN S.; DI MARCO, CHRISTINA NG; COLEMAN, PAUL J.; SANDERS, JOHN M.; EMBREY, MARK W.; STEELE, THOMAS G.
To: MERCK SHARP & DOHME CORP
Reel/Frame 038934/0297 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 16, 2016
From: HU, LIHONG; PENG, XUANJIA
To: WUXI APPTECH (SHANGHAI) CO., LTD.
Reel/Frame 038934/0411 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 16, 2016
From: WUXI APPTEC (SHANGHAI) CO., LTD.
To: MERCK SHARP & DOHME CORP.
Reel/Frame 038934/0490 →
Priority Claims (1)
WO PCT/CN2013/090156 · Dec 20, 2013 · international
Continuity (1)
Related Publication 20160317543A1 · Nov 3, 2016