Methods for determining a tumor margin in a tissue using a desorption electrospray ionization (desi) technique
The invention generally relates to methods for analyzing a metabolite level in a sample. In certain embodiments, methods of the invention may involve obtaining a sample, analyzing the sample using a mass spectrometry technique to determine a level of at least one metabolite in the sample, and correlating the metabolite level with an originating source of the sample, thereby analyzing the sample.
1. A method for determining a tumor margin, the method comprising:
depositing a tissue sample onto a substrate, wherein the tissue sample comprises at least one metabolite indicative of a cancer at one or more locations of the tissue sample;
conducting a desorption electrospray ionization (DESI) technique on the one or more locations of the tissue sample using a solvent selected from the group consisting of: acetonitrile (ACN):ethanol (EtOH) and acetonitrile (ACN):chloroform (CHCl 3 ) that does not destroy native tissue morphology of the tissue sample in order to desorb the at least one metabolite from the one or more locations of the tissue sample and direct the at least one metabolite into a mass spectrometer to thereby generate at least one mass spectral signal of the at least one metabolite from the one or more locations;
performing a histochemistry analysis technique on the tissue sample to stain the tissue sample and produce an optical image of the stained tissue sample;
overlaying spatial molecular information derived from the at least one mass spectral signal onto the optical image of the stained tissue sample to produce an overlaid image; and
defining one or more tumor margins between cancerous and non-cancerous tissue based on the overlaid image.
2. The method according to claim 1 , wherein the DESI technique is performed without prior sample preparation.
3. The method according to claim 1 , wherein the tissue sample is from a frozen tissue sample.
4. The method according to claim 1 , wherein the tissue sample is a human tissue sample.
5. The method according to claim 4 , wherein the human tissue sample is a distribution of cells and extracellular matrix that is spread on the substrate.
6. The method according to claim 1 , wherein the histochemistry analysis technique is Haemotoxylin and Eosin (H&E) staining.
7. The method according to claim 1 , wherein the DESI technique is performed in a negative ion mode.