IP Library Granted Patent US 9,926,271
Granted Patent B2
US 9,926,271 · App. 15/457,821 · Granted Mar 27, 2018

Octahydrocyclopentapyrroles, their preparation and use

Inventors: Konstantin Petrukhin (New Windsor, NY); Christopher Cioffi (Albany, NY); Graham Johnson (Sanbornton, NH); Nicoleta Dobri (New York, NY); Emily Freeman (Albany, NY); Ping Chen (Albany, NY); Michael Conlon (Albany, NY); Lei Zhu (Albany, NY)
Assignee: THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
C07D209/52C07D401/04C07D401/12C07D403/04C07D403/06C07D403/12C07D471/04C07D487/04C07D498/04
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Quick Facts
Patent No.
US 9,926,271
App. No.
15/457,821
Granted
Mar 27, 2018
Kind
B2
Abstract

The present invention provides Octahydrocyclopentapyrrole compounds having the structure: (structurally represented) wherein psi is absent or present, and when present is a bond; R1, R2, R3, R4, and R5 are each independently H, halogen, CF, or C1-C4 alkyl; R6 is absent or present, and when present is H, OH, or halogen; A is absent or present, and when present is C(O) or C(O)NH; B is substituted or unsubstituted monocycle, bicycle, heteromonocycle, heterobicycle, benzyl, CO2H or (C1-C4 alkyl)-CO2H, wherein when B is CO2H, then A is present and is C(O); and when psi is present, then R6 is absent and when psi is absent, then R6 is present, or a pharmaceutically acceptable salt thereof, for treatment of diseases characterized by excessive lipofuscin accumulation in the retina.

Claims (63)

1. A compound having the structure:

wherein

ψ is absent;

R 1 , R 2 , R 3 , R 4 , and R 5 are each independently H, halogen, CF 3 or C 1 -C 4 alkyl;

R 6 is absent or present, and when present is H, OH, or halogen;

A is absent or present, and when present is

B is substituted or unsubstituted heteromonocycle or heterobicycle; and

wherein when ψ is present, then R 6 is absent and when ψ is absent, then R 6 is present,

or a pharmaceutically acceptable salt thereof.

2. The compound of claim 1 having the structure:

3. The compound of claim 1 having the structure:

4. The compound of claim 1 , wherein B has the structure:

wherein

n is 1;

R 7 is H, C 1 -C 4 alkyl, or oxetane;

Y 1 , Y 2 and Y 4 are each CH 2 or C(CH 3 ) 2 ; and

Y 3 is O, SO 2 , or N—R 10 ,

wherein

R 10 is H, C 1 -C 4 alkyl, C 1 -C 4 cycloalkyl, (C 1 -C 4 alkyl)-CF 3 , (C 1 -C 4 alkyl)-OCH 3 , (C 1 -C 4 alkyl)-halogen, SO 2 —(C 1 -C 4 alkyl), SO 2 —(C 1 -C 4 alkyl)-CF 3 , SO 2 —(C 1 -C 4 alkyl)-OCH 3 , SO 2 —(C 1 -C 4 alkyl)-halogen, C(O)—(C 1 -C 4 alkyl), C(O)—(C 1 -C 4 alkyl)-CF 3 , C(O)—(C 1 -C 4 alkyl)-OCH 3 , C(O)—(C 1 -C 4 alkyl)-halogen, C(O)—NH—(C 1 -C 4 alkyl), C(O)—N(C 1 -C 4 alkyl) 2 , (C 1 -C 4 alkyl)-C(O)OH, C(O)—NH 2 or oxetane.

5. The compound of claim 4 , wherein B has the structure:

wherein

R 10 is H, C 1 -C 4 alkyl, C 1 -C 4 cycloalkyl, (C 1 -C 4 alkyl)-CF 3 , (C 1 -C 4 alkyl)-OCH 3 , (C 1 -C 4 alkyl)-halogen, SO 2 —(C 1 -C 4 alkyl), SO 2 —(C 1 -C 4 alkyl)-CF 3 , SO 2 —(C 1 -C 4 alkyl)-OCH 3 , SO 2 —(C 1 -C 4 alkyl)-halogen, C(O)—(C 1 -C 4 alkyl), C(O)—(C 1 -C 4 alkyl)-CF 3 , C(O)—(C 1 -C 4 alkyl)-OCH 3 , C(O)—(C 1 -C 4 alkyl)-halogen, C(O)—NH—(C 1 -C 4 alkyl), C(O)—N(C 1 -C 4 alkyl) 2 , (C 1 -C 4 alkyl)-C(O)OH, C(O)—NH 2 or oxetane.

6. The compound of claim 5 ,

wherein R 10 is C(O)—CH 3 , C(O)—CH 2 CH 3 , C(O)—CH 2 CH 2 CH 3 , C(O)—CH(CH 3 ) 2 , C(O)—CH 2 CH(CH 3 ) 2 , C(O)-t-Bu, C(O)—CH 2 OCH 3 , C(O)—CH 2 CF 3 , C(O)—CH 2 Cl, C(O)—CH 2 F, C(O)—CH 2 CH 2 OCH 3 , C(O)—CH 2 CH 2 CF 3 , C(O)—CH 2 CH 2 Cl, C(O)—CH 2 CH 2 F,

7. The compound of claim 1 , wherein B has the structure:

wherein

Y 1 , Y 2 , Y 3 and Y 4 are each independently CR 8 or N,

wherein each R 8 is independently H, halogen, C 1 -C 4 alkyl, C 1 -C 4 cycloalkyl, O(C 1 -C 4 alkyl), CN, CF 3 , C(O)OH, C(O)—NH 2 , C(O)—N(CH 3 ) 2 , C(O)—NHCH 3 , or NHC(O)—N(CH 3 ) 2 .

8. The compound of claim 7 , wherein B has the structure:

wherein each R 8 is independently H, halogen, C 1 -C 4 alkyl, C 1 -C 4 cycloalkyl, O(C 1 -C 4 alkyl), CN, CF 3 , C(O)OH, C(O)—NH 2 , C(O)—N(CH 3 ) 2 , C(O)—NHCH 3 , or NHC(O)—N(CH 3 ) 2 .

9. The compound of claim 8 , wherein B has the structure:

wherein each R 8 is independently H, halogen, C 1 -C 4 alkyl, C 1 -C 4 cycloalkyl, O(C 1 -C 4 alkyl), CN, CF 3 , C(O)OH, C(O)—NH 2 , C(O)—N(CH 3 ) 2 , C(O)—NHCH 3 , or NHC(O)—N(CH 3 ) 2 .

10. The compound of claim 8 ,

wherein each R 8 is independently H, Cl, Br, F, OCH 3 , OCH 2 CH 3 , CF 3 , CN, CH 3 , CH 3 CH 3 , C(O) OH, C(O)—NH 2 , C(O)—N(CH 3 ) 2 , C(O)—NHCH 3 , NHC(O)—NHCH 3 , NHC(O)—N(CH 3 ) 2 , SO 2 —NHCH 3 or SO 2 —N(CH 3 ) 2 .

11. The compound of claim 9 ,

wherein R 8 is H, Cl, Br, F, OCH 3 , OCH 2 CH 3 , CF 3 , CN, CH 3 , CH 3 CH 3 , C(O)OH, C(O)—NH 2 , C(O)—N(CH 3 ) 2 , C(O)—NHCH 3 , NHC(O)—NHCH 3 , NHC(O)—N(CH 3 ) 2 , SO 2 —NHCH 3 or SO 2 —N(CH 3 ) 2 .

12. The compound of claim 1 , wherein B has the structure:

wherein R 21 , R 22 , R 23 , R 24 , and R 25 are each independently

H, halogen CN, CF 3 , OH, NH 2 , C 1 -C 10 alkyl, C 3 -C 6 cycloalkyl, O(C 1 -C 10 alkyl), C(O)NH 2 , C(O)NH(C 1 -C 10 alkyl), C(O)N(C 1 -C 4 alkyl) 2 , C(O)OH, C(O)O(C 1 -C 10 alkyl), C(O)(C 1 -C 10 alkyl), C(O)NH(SO 2 )—(C 1 -C 10 alkyl), C(O)NH(SO 2 )—(C 3 -C 6 cycloalkyl), C(O)NH(SO 2 )-(aryl), O(SO 2 )—NH 2 , NHC(O)—NH(C 1 -C 10 alkyl), NHC(O)—N(C 1 -C 4 alkyl) 2 , SO 2 —(C 1 -C 10 alkyl).

13. The compound of claim 12 , wherein B has the structure:

wherein R 21 , R 22 , R 24 and R 25 are each independently

H, halogen, OH, NH 2 , C 1 -C 4 alkyl, C 3 -C 6 cycloalkyl, O(C 1 -C 4 alkyl), C(O)NH 2 , C(O)NH(C 1 -C 4 alkyl), C(O)N(C 1 -C 4 alkyl) 2 , C(O)OH, C(O)O(C 1 -C 4 alkyl), C(O)(C 1 -C 4 alkyl), C(O)NH(SO 2 )—(C 1 -C 4 alkyl), C(O)NH(SO 2 )—(C 3 -C 6 cycloalkyl), C(O)NH(SO 2 )-(aryl), or O(SO 2 )—NH 2 , SO 2 —(C 1 -C 4 alkyl).

14. The compound of claim 12 , wherein B has the structure:

wherein R 22 and R 24 are each independently

H, halogen, OH, NH 2 , C 1 -C 4 alkyl, C 3 -C 6 cycloalkyl, O(C 1 -C 4 alkyl), C(O)NH 2 , C(O)NH(C 1 -C 4 alkyl), C(O)N(C 1 -C 4 alkyl) 2 , C(O)OH, C(O)O(C 1 -C 4 alkyl), C(O) (C 1 -C 4 alkyl), C(O)NH(SO 2 )—(C 1 -C 4 alkyl), C(O)NH(SO 2 )—(C 3 -C 6 cycloalkyl), C(O)NH(SO 2 )-(aryl), or O(SO 2 )—NH 2 , SO 2 —(C 1 -C 4 alkyl).

15. The compound of claim 13 , wherein R 21 , R 22 , R 24 and R 25 are each independently H, F, Cl, CF 3 , CH 3 , OCH 3 , OH, SO 2 —CH 3 , C(O)NH 2 , C(O)OH, C(O)OCH 3 ,

16. The compound of claim 14 , wherein R 22 and R 24 are each independently H, F, Cl, CF 3 , CH 3 , OCH 3 , OH, SO 2 —CH 3 , C(O)NH 2 , C(O)OH, C(O)OCH 3 ,

17. The compound of claim 12 , wherein B has the structure

18. A pharmaceutical composition comprising the compound of claim 1 and a pharmaceutically acceptable carrier.

19. A method for treating a disease characterized by excessive lipofuscin accumulation in the retina in a mammal afflicted therewith comprising administering to the mammal an effective amount of the compound of claim 1 .

20. The method of claim 19 , wherein the disease characterized by excessive lipofuscin accumulation in the retina is Age-Related Macular Degeneration, dry (atrophic) Age-Related Macular Degeneration, Stargardt Disease, Best disease, adult vitelliform maculopathy or Stargardt-like macular dystrophy.

21. A compound having the structure:

or a pharmaceutically acceptable salt thereof.

22. A pharmaceutical composition comprising the compound of claim 21 and a pharmaceutically acceptable carrier.

23. A method for treating a disease characterized by excessive lipofuscin accumulation in the retina in a mammal afflicted therewith comprising administering to the mammal an effective amount of the compound of claim 21 .

24. The method of claim 23 , wherein the disease characterized by excessive lipofuscin accumulation in the retina is Age-Related Macular Degeneration, dry (atrophic) Age-Related Macular Degeneration, Stargardt Disease, Best disease, adult vitelliform maculopathy or Stargardt-like macular dystrophy.

25. The method of claim 23 , wherein the disease characterized by excessive lipofuscin accumulation in the retina is Age-Related Macular Degeneration or dry (atrophic) Age-Related Macular Degeneration.

26. A compound having the structure:

or a pharmaceutically acceptable salt thereof.

27. A compound having the structure:

or a pharmaceutically acceptable salt thereof.

28. A compound having the structure:

or a pharmaceutically acceptable salt thereof.

Assignments (3)
CONFIRMATORY LICENSE Recorded Aug 25, 2017
From: COLUMBIA UNIV NEW YORK MORNINGSIDE
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 043676/0205 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 20, 2017
From: CIOFFI, CHRISTOPHER; FREEMAN, EMILY; CHEN, PING; CONLON, MICHAEL; ZHU, LEI
To: THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
Reel/Frame 041642/0138 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 20, 2017
From: PETRUKHIN, KONSTANTIN; JOHNSON, GRAHAM; DOBRI, NICOLETA
To: THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
Reel/Frame 041642/0184 →
Continuity (3)
Continuation 14775540
Provisional Application 61785288 · Mar 14, 2013
Related Publication 20170247327A1 · Aug 31, 2017