IP Library Granted Patent US 10,117,887
Granted Patent B2
US 10,117,887 · App. 15/655,317 · Granted Nov 6, 2018

FAP-activated therapeutic agents, and uses related thereto

Inventors: William W. Bachovchin (Cambridge, MA); Hung-sen Lai (Andover, MA); David G. Sanford (Reading, MA); Sarah E. Poplawski (Belmont, MA); Wengen Wu (Winchester, MA)
Assignee: BACH BIOSCIENCES, LLC
A61K31/704A61K47/545A61K47/62A61K47/64
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Quick Facts
Patent No.
US 10,117,887
App. No.
15/655,317
Granted
Nov 6, 2018
Kind
B2
Abstract

Disclosed are prodrugs of anthracyclines (such as doxorubicin) and derivatives thereof that are selectively cleaved and activated by fibroblast activating protein (FAP). The prodrugs are useful for targeted delivery of “warhead” anthracycline or anthracycline derivative to FAP-expressing tissues, including cancer (e.g., solid tumors). Also provided are pharmaceutical compositions comprising the prodrugs, as well as methods of using the prodrugs to treat a disorder characterized by FAP upregulation, e.g., cancer, undesirable fibrosis, and undesirable inflammation.

Claims (65)

1. A prodrug represented by Formula I:

or a pharmaceutically acceptable salt thereof, wherein:

R 1 represents (C 1 -C 10 )alkyl, (C 1 -C 10 )alkoxy, (C 1 -C 10 )alkyl-C(O)—(C 1 -C 10 )alkyl, (C 3 -C 8 )cycloalkyl, (C 3 -C 8 )cycloalkyl(C 1 -C 10 )alkyl, aryl, aryl(C 1 -C 10 )alkyl, heteroaryl, or heteroaryl(C 1 -C 10 )alkyl, wherein any R 1 is optionally substituted with one or more substituents independently selected from the group consisting of halo, hydroxy, carboxylate, cyano, amino, nitro, and thio (—SH); or

 represents an N-terminally blocked alpha amino acid residue, wherein X is O;

R 2 represents H or a (C 1 -C 6 )alkyl;

R 3 represents a (C 1 -C 6 )alkyl;

R 4 is absent or represents a (C 1 -C 6 )alkyl, —OH, —NH 2 , or halogen;

X represents O or S;

L represents a bond, or

 represents a self-immolative linker; and

Cyt′ represents a radical of an anthracycline or derivative thereof.

2. The prodrug of claim 1 , wherein L is a bond.

3. The prodrug of claim 1 , wherein the anthracycline or derivative thereof is doxorubicin.

4. The prodrug of claim 1 , wherein L is a self-immolative linker.

5. The prodrug of claim 4 , wherein the anthracycline or derivative thereof is doxorubicin.

6. The prodrug of claim 1 , wherein R 2 is H.

7. The prodrug of claim 1 , wherein R 3 is methyl, ethyl, propyl, or isopropyl.

8. The prodrug of claim 1 , wherein R 3 is methyl.

9. The prodrug of claim 1 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, which comprises a moiety which, at physiological pH, reduces cell permeability of the prodrug relative to the anthracycline or derivative thereof.

10. The prodrug of claim 1 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, which comprises one or more functional groups that are ionized at physiological pH.

11. The prodrug of claim 1 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is an acyl(C 1 -C 10 )alkyl substituted with one or more functional groups that are ionized at physiological pH.

12. The prodrug of claim 11 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is represented by the formula HO 2 C—(C 1 -C 10 )alkyl-C(O)—.

13. The prodrug of claim 11 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is represented by the formula HO 2 C—(CH 2 ) 2 —C(O)—.

14. The prodrug of claim 1 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is selected from the group consisting of formyl, dansyl, acetyl, benzoyl, trifluoroacetyl, succinyl, and methoxysuccinyl.

15. The prodrug of claim 1 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is selected from the group consisting of aryl(C 1 -C 6 )acyl and heteroaryl(C 1 -C 6 )acyl.

16. The prodrug of claim 15 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and the terminal blocking group is an aryl(C 1 -C 6 )acyl.

17. The prodrug of claim 16 , wherein the aryl(C 1 -C 6 )acyl is a (C 1 -C 6 )acyl substituted with an aryl selected from the group consisting of benzyl, naphthalenyl, phenanthrenyl, phenolyl, and anilinyl.

18. The prodrug of claim 17 , wherein the aryl(C 1 -C 6 )acyl is a (C 1 )acyl substituted with an aryl selected from the group consisting of benzyl, naphthalenyl, phenanthrenyl, phenolyl, and anilinyl.

19. The prodrug of claim 15 , wherein

represents an N-terminally blocked alpha amino acid residue, wherein X is O, and R 1 is a heteroaryl(C 1 -C 6 )acyl.

20. The prodrug of claim 19 , wherein the heteroaryl(C 1 -C 6 )acyl is a (C 1 -C 6 )acyl substituted with a heteroaryl selected from the group consisting of pyrryl, furyl, thiophenyl, imidazolyl, oxazolyl, thiazolyl, triazolyl, pyrazolyl, pyridinyl, pyrazinyl, pyridazinyl, and pyrimidinyl.

21. The prodrug of claim 20 , wherein the heteroaryl(C 1 -C 6 )acyl is a (C 1 )acyl substituted with a heteroaryl selected from the group consisting of pyrryl, furyl, thiophenyl, imidazolyl, oxazolyl, thiazolyl, triazolyl, pyrazolyl, pyridinyl, pyrazinyl, pyridazinyl, and pyrimidinyl.

22. The prodrug of claim 1 , represented by the formula

23. A pharmaceutical composition, comprising a prodrug of claim 1 , or a pharmaceutically acceptable salt thereof; and a pharmaceutically acceptable carrier.

24. A method of treating a disorder in which fibroblast activation protein (FAP) is upregulated, comprising administering to a subject in need thereof a therapeutically effective amount of a prodrug of claim 1 , or a pharmaceutically acceptable salt thereof.

25. The method of claim 24 , wherein the disorder is selected from the group consisting of cancer, fibrosis, and inflammation.

26. The method of claim 24 , wherein the disorder is cancer.

27. The method of claim 24 , wherein the disorder is fibrosis.

28. The method of claim 24 , wherein the disorder is inflammation.

29. The prodrug of claim 1 , wherein X is O, and

is acyl(C 1 -C 10 )alkyl substituted with one or more functional groups that are ionized at physiological pH.

30. The prodrug of claim 1 , wherein X is O, and

is HO 2 C—(C 1 -C 10 )alkyl-C(O)—.

31. The prodrug of claim 1 , wherein X is O, and

is HO 2 C—(CH 2 ) 2 —C(O)—.

32. The prodrug of claim 1 , wherein X is O, and

is selected from the group consisting of formyl, dansyl, acetyl, benzoyl, trifluoroacetyl, succinyl, and methoxysuccinyl.

33. The prodrug of claim 1 , wherein X is O, and

is selected from the group consisting of aryl(C 1 -C 6 )acyl and heteroaryl(C 1 -C 6 )acyl.

34. The prodrug of claim 33 , wherein X is O, and

is aryl(C 1 -C 6 )acyl.

35. The prodrug of claim 34 , wherein aryl(C 1 -C 6 )acyl is a (C 1 -C 6 )acyl substituted with an aryl selected from the group consisting of benzyl, naphthalenyl, phenanthrenyl, phenolyl, and anilinyl.

36. The prodrug of claim 35 , wherein aryl(C 1 -C 6 )acyl is a (C 1 )acyl substituted with an aryl selected from the group consisting of benzyl, naphthalenyl, phenanthrenyl, phenolyl, and anilinyl.

37. The prodrug of claim 33 , wherein X is O, and

is heteroaryl(C 1 -C 6 )acyl.

38. The prodrug of claim 37 , wherein heteroaryl(C 1 -C 6 )acyl is a (C 1 -C 6 )acyl substituted with a heteroaryl selected from the group consisting of pyrryl, furyl, thiophenyl, imidazolyl, oxazolyl, thiazolyl, triazolyl, pyrazolyl, pyridinyl, pyrazinyl, pyridazinyl, and pyrimidinyl.

39. The prodrug of claim 38 , wherein heteroaryl(C 1 -C 6 )acyl is a (C 1 )acyl substituted with a heteroaryl selected from the group consisting of pyrryl, furyl, thiophenyl, imidazolyl, oxazolyl, thiazolyl, triazolyl, pyrazolyl, pyridinyl, pyrazinyl, pyridazinyl, and pyrimidinyl.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 4, 2018
From: TRUSTEES OF TUFTS COLLEGE
To: BACH BIOSCIENCES, LLC
Reel/Frame 046098/0709 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 21, 2017
From: BACHOVCHIN, WILLIAM W.; LAI, HUNG-SEN; SANFORD, DAVID G.; POPLAWSKI, SARAH E.; WU, WENGEN
To: TRUSTEES OF TUFTS COLLEGE
Reel/Frame 043646/0364 →
Continuity (3)
Continuation 15318607
Provisional Application 62012003 · Jun 13, 2014
Related Publication 20170319609A1 · Nov 9, 2017