IP Library › Granted Patent US 10,258,627
Granted Patent B2
US 10,258,627 · App. 15/659,306 · Granted Apr 16, 2019

DNA-PK inhibitors

Inventors: John Patrick Maxwell (Hingham, MA); Paul S. Charifson (Framingham, MA); Qing Tang (Acton, MA); Steven M. Ronkin (Watertown, MA); Katrina Lee Jackson (Cambridge, MA); Albert Charles Pierce (Cambridge, MA); David J. Lauffer (Stow, MA); Pan Li (Lexington, MA); Simon Giroux (Cambridge, MA); Jinwang Xu (Framingham, MA); Kevin Michael Cottrell (Cambridge, MA); Mark A. Morris (Somerville, MA); Nathan D. Waal (Cambridge, MA); John J. Court (Littleton, MA); Wenxin Gu (Concord, MA); Hongbo Deng (Southborough, MA)
Assignee: Vertex Pharmaceutical Incorporated
A61K31/5377A61K31/506A61K31/5386C07D241/40C07D241/42C07D241/44C07D271/12C07D401/12C07D401/14C07D403/12C07D403/14C07D405/12C07D405/14C07D413/04C07D413/12C07D413/14C07D417/12C07D471/04C07D473/40C07D475/00C07D487/04C07D491/048C07D491/052C07D491/056C07D491/08C07D498/08C07D513/04
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Quick Facts
Patent No.
US 10,258,627
App. No.
15/659,306
Granted
Apr 16, 2019
Kind
B2
Abstract

The present invention relates to compounds useful as inhibitors of DNA-PK. The invention also provides pharmaceutically acceptable compositions comprising said compounds and methods of using the compositions in the treatment of various disease, conditions, or disorders.

Claims (50)

1. A method of sensitizing a cell to an agent that induces a DNA lesion comprising the step of contacting the cell with a compound having the formula:

or a pharmaceutically acceptable salt thereof, wherein

Ring A is

Ring B is

wherein Ring B is optionally substituted with up to 4 fluorine atoms or up to two C 1-4 alkyl optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups;

X is NH or O;

each of R 1 and R 2 is, independently, hydrogen, —C(O)NHR 4 , —C(O)OR 4 , —NHC(O)R 4 , —NHC(O)OR 4 , —NHC(O)NHR 4 , —NHS(O) 2 R 4 , —NHR 4 , or —OR 4 , wherein R 1 and R 2 cannot simultaneously be hydrogen, and wherein R 1 and R 2 and the intervening carbon atom can form a dioxane or dioxolane ring;

R 3 is hydrogen, C 1-4 alkyl, fluoro, chloro, OC 1-2 alkyl, C(O)OH, C(O)OC 1-2 alkyl, CN, C(O)NHC 1-2 alkyl, or C(O)NH 2 , wherein each of said R 3 alkyl is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups;

R 4 is hydrogen, C 1-4 alkyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-5 cycloalkyl, phenyl, pyrrole, imidazole, pyrazole, triazole, thiazole, isothiazole, oxazole, pyridine, pyrimidine, pyrimidinone, pyrazine, pyridazine, quinoline, oxetane, tetrahydrofuran, tetrahydropyran, dihydroisoxazole, pyrimidine-2,4(1H,3H)-dione, dihydrofuropyrimidine, dihydropyranopyrimidine, dihydropyrrolopyrimidine, tetrahydropteridine, or tetrahydropyridopyrimidine, wherein each of said R 4 groups is optionally substituted with Br, Cl, up to three fluorine atoms, up to three C 1-4 alkyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-6 cycloalkyl, an oxetane ring, a tetrahydrofuran ring, a dihydropyran ring, a tetrahydropyran ring, a pyrrolidine ring, a pyrazole ring, a triazole ring, a tetrazole ring, an oxadiazole ring, CN, CH 2 OR 5 , C(O)R 5 , C(O)N(R 5 ) 2 , C(O)OR 5 , NO 2 —NHC(O)R 5 , N(R 5 ) 2 , or up to two OR 5 , wherein each of said optional R 4 substituents is optionally substituted with up to 3 fluorine atoms, up to two C 1-4 alkyl groups, up to two OH groups, up to two OC 1-4 alkyl groups, or up to two SC 1-4 alkyl groups; and

each R 5 is, independently, hydrogen, C 1-4 alkyl, imidazole, triazole, thiazole, pyridine, pyrimidine, oxetane, tetrahydrofuran, or tetrahydropyran, and each R 5 group is optionally substituted with chloro, up to three fluorine atoms, up to two C 1-2 alkyl, CH 2 OH, CN, up to two OH, up to two OC 1-2 alkyl, a spirooxetane, pyrrolidine, or triazole, or two R 5 groups together with the intervening nitrogen atom form a morpholine ring, azetidine ring, pyrrolidine ring, piperidine ring, or piperazine ring, wherein each of said rings is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups;

or a pharmaceutical composition comprising said compound, or a pharmaceutically acceptable salt thereof.

2. The method of claim 1 , wherein X is NH.

3. The method of claim 1 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

4. The method of claim 3 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

5. The method of claim 2 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

6. The method of claim 5 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

7. The method of claim 6 , wherein

R 3 is hydrogen, C 1-4 alkyl, fluoro, chloro, OC 1-2 alkyl, C(O)OH, C(O)OC 1-2 alkyl, CN, C(O)NHC 1-2 alkyl, or C(O)NH 2 , wherein each of said R 3 alkyl is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups;

R 4 is hydrogen, C 1-4 alkyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-5 cycloalkyl, phenyl, pyrrole, imidazole, pyrazole, triazole, thiazole, isothiazole, oxazole, pyridine, pyrimidine, pyrimidinone, pyrazine, pyridazine, quinoline, oxetane, tetrahydrofuran, tetrahydropyran, dihydroisoxazole, pyrimidine-2,4(1H,3H)-dione, dihydrofuropyrimidine, dihydropyranopyrimidine, dihydropyrrolopyrimidine, tetrahydropteridine, or tetrahydropyridopyrimidine;

each of said R 4 groups is optionally substituted with Br, Cl, up to three fluorine atoms, up to three C 1-4 alkyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-6 cycloalkyl, an oxetane ring, a tetrahydrofuran ring, a dihydropyran ring, a tetrahydropyran ring, a pyrrolidine ring, a pyrazole ring, a triazole ring, a tetrazole ring, an oxadiazole ring, CN, CH 2 OR 5 , C(O)R 5 , C(O)N(R 5 ) 2 , C(O)OR 5 , NO 2 , NHC(O)R 5 , N(R 5 ) 2 , or up to two OR 5 , wherein each of said optional R 4 substituents is optionally substituted with up to 3 fluorine atoms, up to two C 1-4 alkyl groups, up to two OH groups, up to two OC 1-4 alkyl groups, or up to two SC 1-4 alkyl groups; and

each R 5 is, independently, hydrogen, C 1-4 alkyl, imidazole, triazole, thiazole, pyridine, pyrimidine, oxetane, tetrahydrofuran, or tetrahydropyran, and each R 5 group is optionally substituted with chloro, up to three fluorine atoms, up to two C 1-2 alkyl, CH 2 OH, CN, up to two OH, up to two OC 1-2 alkyl, pyrrolidine, or triazole, or two R 5 groups together with the intervening nitrogen atom form a morpholine ring, azetidine ring, pyrrolidine ring, piperidine ring, or piperazine ring, wherein each of said rings is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups.

8. The method of claim 6 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

9. The method of claim 1 , wherein X is O.

10. The method of claim 9 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

11. The method of claim 10 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

12. The method of claim 10 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

13. The method of claim 9 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

14. The method of claim 13 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

15. The method of claim 13 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof, wherein Y is O or NH.

16. The method of claim 13 , wherein the compound is of formula:

or a pharmaceutically acceptable salt thereof.

17. The method of claim 16 , wherein

R 3 is hydrogen, C 1-4 alkyl, fluoro, chloro, OC 1-2 alkyl, C(O)OH, C(O)OC 1-2 alkyl, CN, C(O)NHC 1-2 alkyl, or C(O)NH 2 , wherein each of said R 3 alkyl is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups;

R 4 is hydrogen, C 1-4 alkyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-5 cycloalkyl, phenyl, pyrrole, imidazole, pyrazole, triazole, thiazole, isothiazole, oxazole, pyridine, pyrimidine, pyrimidinone, pyrazine, pyridazine, quinoline, oxetane, tetrahydrofuran, tetrahydropyran, dihydroisoxazole, pyrimidine-2,4(1H,3H)-dione, dihydrofuropyrimidine, dihydropyranopyrimidine, dihydropyrrolopyrimidine, tetrahydropteridine, or tetrahydropyridopyrimidine;

each of said R 4 groups except hydrogen is optionally substituted with Br, Cl, up to three fluorine atoms, up to three C 1-4 alkyl, up to two C 0-4 alkyl-R 5 , up to two C 0-4 alkyl-O-C 0-4 alkyl-R 5 , C 2-4 alkenyl, C 2-4 alkenyl, C 2-4 alkynyl, C 3-6 cycloalkyl, CN NO 2 , C(O)R 5 , C(O)N(R 5 ) 2 , C(O)OC 0-4 alkyl-R 5 , NHC(O)R 5 , N(R 5 ) 2 , oxetane, azetidine tetrahydrofuran, dihydropyran, tetrahydropyran, pyrrolidine, pyrazole, triazole, tetrazole, or oxadiazole, wherein each of said optional R 4 substituents is optionally substituted with up to 3 fluorine atoms, up to two C 1-4 alkyl groups, up to two OH groups, up to two OC 1-4 alkyl groups, or up to two SC 1-4 alkyl groups; and

each R 5 is, independently, hydrogen, C 1-4 alkyl, C 3-5 cycloalkyl, imidazole, triazole, thiazole, pyridine, pyrimidine, oxetane, tetrahydrofuran, or tetrahydropyran, and each R 5 group is optionally substituted with chloro, up to three fluorine atoms, up to two C 1-2 alkyl, CH 2 OH, CN, up to two OH, up to two OC 1-2 alkyl, pyrrolidine, or triazole, or two R 5 groups together with an intervening nitrogen atom form a morpholine ring, azetidine ring, pyrrolidine ring, piperidine ring, or piperazine ring, wherein each of said rings is optionally substituted with up to 3 fluorine atoms, up to two OH, or up to two OC 1-2 alkyl groups.

18. The method of claim 1 , wherein

19. The method of claim 1 , wherein the compound of formula (I) is of formula:

or pharmaceutically acceptable salts thereof.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 26, 2018
From: XU, JINWANG; COTTRELL, KEVIN M.; MORRIS, MARK A.; WAAL, NATHAN D.; COURT, JOHN J.; GU, WENXIN; DENG, HONGBO
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 045351/0074 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 26, 2018
From: MAXWELL, JOHN PATRICK; CHARIFSON, PAUL S.; TANG, QING; RONKIN, STEVEN M.; JACKSON, KATRINA LEE; PIERCE, ALBERT CHARLES; LAUFFER, DAVID J.; LI, PAN; GIROUX, SIMON
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 045725/0005 →
Continuity (4)
Continuation 15148229 · May 6, 2016
Division 14205508 · Mar 12, 2014
Provisional Application 61777816 · Mar 12, 2013
Related Publication 20180161336A1 · Jun 14, 2018
Cited By (1)
US 12,251,387