IP Library Granted Patent US 10,337,010
Granted Patent B2
US 10,337,010 · App. 15/683,999 · Granted Jul 2, 2019

Angiopoietin-like 3 (ANGPTL3) iRNA compositions and methods of use thereof

Inventors: Brian Bettencourt (Groton, MA); William Querbes (Boston, MA); Kevin Fitzgerald (Brookline, MA); Maria Frank-Kamenetsky (Brookline, MA); Stuart Milstein (Arlington, MA); Svetlana Shulga Morskaya (Sudbury, MA)
Assignee: Alnylam Pharmaceuticals, Inc.
C12N15/1136A61K31/713A61K31/7105C12N15/113C12N2310/14C12N2310/315C12N2310/321C12N2310/322C12N2310/3515
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Quick Facts
Patent No.
US 10,337,010
App. No.
15/683,999
Granted
Jul 2, 2019
Kind
B2
Abstract

The invention relates to double-stranded ribonucleic acid (dsRNA) compositions targeting the ANGPTL3 gene, as well as methods of inhibiting expression of ANGPTL3 and methods of treating subjects having a disorder of lipid metabolism, such as hyperlipidemia or hypertriglyceridemia, using such dsRNA compositions.

Claims (84)

1. A double-stranded ribonucleic acid (dsRNA) agent for inhibiting expression of Angiopoietin-like 3 (ANGPTL3), wherein said dsRNA agent comprises a sense strand and an antisense strand forming a double stranded region, the antisense strand comprising a region of complementarity to an mRNA encoding ANGPTL3 which comprises at least 15 contiguous nucleotides differing by no more than 3 nucleotides from the complement of nucleotides 1051-1098 of SEQ ID NO:1.

2. The dsRNA agent of claim 1 , wherein said dsRNA agent comprises at least one modified nucleotide.

3. The dsRNA agent of claim 2 , wherein at least one of said modified nucleotides is selected from the group consisting of a 2′-O-methyl modified nucleotide, a nucleotide comprising a 5′-phosphorothioate group, and a terminal nucleotide linked to a cholesteryl derivative or a dodecanoic acid bisdecylamide group.

4. The dsRNA agent of claim 1 , wherein the region of complementarity is at least 17 nucleotides in length.

5. The dsRNA agent of claim 1 , wherein each strand is no more than 30 nucleotides in length.

6. The dsRNA agent of claim 1 , wherein at least one strand comprises a 3′ overhang of at least 1 nucleotide.

7. The dsRNA agent of claim 1 , further comprising a ligand.

8. A cell containing the dsRNA agent of claim 1 .

9. A pharmaceutical composition for inhibiting expression of an ANGPTL3 gene comprising the dsRNA agent of claim 1 .

10. A method of inhibiting ANGPTL3 expression in a cell, the method comprising:

(a) contacting the cell with the dsRNA agent of claim 1 ; and

(b) maintaining the cell produced in step (a) for a time sufficient to obtain degradation of the mRNA transcript of an ANGPTL3gene, thereby inhibiting expression of the ANGPTL3 gene in the cell.

11. The method of claim 10 , wherein said cell is within a subject.

12. A method of treating a subject having a disorder that would benefit from reduction in ANGPTL3 expression, comprising administering to the subject a therapeutically effective amount of the dsRNA agent of claim 1 , thereby treating said subject.

13. The method of claim 12 , wherein the disorder is a disorder of lipid metabolism.

14. A method of inhibiting the expression of ANGPTL3 in a subject, the method comprising administering to said subject a therapeutically effective amount of the dsRNA agent of claim 1 , thereby inhibiting the expression of ANGPTL3 in said subject.

15. The dsRNA agent of claim 1 , wherein the double-stranded region is 17-25 nucleotide pairs in length.

16. The dsRNA agent of claim 1 , wherein the double-stranded region is 21-23 nucleotide pairs in length.

17. The dsRNA agent of claim 1 , wherein each strand is 19-30 nucleotides in length.

18. The dsRNA agent of claim 1 , wherein the sense strand has a total of 21 nucleotides and the antisense strand has a total of 23 nucleotides.

19. The dsRNA agent of claim 1 , wherein the region of complementarity is between 19 and 21 nucleotides in length.

20. The dsRNA agent of claim 3 , wherein said modified nucleotide is a 2′-O-methyl or a 2′-fluoro modified nucleotide.

21. The dsRNA agent of claim 1 , wherein at least one strand comprises a 3′ overhang of at least 2 nucleotides.

22. The dsRNA agent of claim 7 , wherein the ligand is conjugated to the 3′ end of the sense strand of the dsRNA agent.

23. The dsRNA agent of claim 22 , wherein the ligand is an N-acetylgalactosamine (GalNAc) derivative.

24. The dsRNA agent of claim 22 , wherein the ligand is

25. The dsRNA agent of claim 1 , wherein said dsRNA agent further comprises at least one phosphorothioate or methylphosphonate internucleotide linkage.

26. The dsRNA agent of claim 25 , wherein the phosphorothioate or methylphosphonate internucleotide linkage is at the 3′-terminus of one strand.

27. The dsRNA agent of claim 1 , wherein the region of complementarity comprises any one of the antisense nucleotide sequences selected from the group consisting of

5′-UUGUCUUUCCAGUCUUCCAACUC-3′ (SEQ ID NO:562);

5′-AAUAUAAUGUUUGUUGUCUUUCC-3′ (SEQ ID NO:449);

5′-UUCAAUAUAAUGUUUGUUGUCUU-3′ (SEQ ID NO:498);

5′-AUUCAAUAUAAUGUUUGUUGUCU-3′ (SEQ ID NO:480);

5′-UAUUCAAUAUAAUGUUUGUUGUC-3′ (SEQ ID NO:575);

5′-AUAUUCAAUAUAAUGUUUGUUGU-3′ (SEQ ID NO:486);

5′-AAUAUUCAAUAUAAUGUUUGUUG-3′ (SEQ ID NO:495);

5′-AAGAAUAUUCAAUAUAAUGUUUG-3′ (SEQ ID NO:582);

5′-AAAGAAUAUUCAAUAUAAUGUUU-3′ (SEQ ID NO:533); and

5′-AAAAGAAUAUUCAAUAUAAUGUU-3′ (SEQ ID NO:459).

28. The dsRNA agent of claim 1 , wherein the sense and antisense strands comprise nucleotide sequences selected from the group consisting of

5′-GUUGGAAGACUGGAAAGACAA-3′ (SEQ ID NO:377) and

5′-UUGUCUUUCCAGUCUUCCAACUC-3′ (SEQ ID NO:562);

5′-AAAGACAACAAACAUUAUAUU-3′ (SEQ ID NO:264) and

5′-AAUAUAAUGUUUGUUGUCUUUCC-3′ (SEQ ID NO:449);

5′-GACAACAAACAUUAUAUUGAA-3′ (SEQ ID NO:313) and

5′-UUCAAUAUAAUGUUUGUUGUCUU-3′ (SEQ ID NO:498);

5′-ACAACAAACAUUAUAUUGAAU-3′ (SEQ ID NO:295) and

5′-AUUCAAUAUAAUGUUUGUUGUCU-3′ (SEQ ID NO:480);

5′-CAACAAACAUUAUAUUGAAUA-3′ (SEQ ID NO:390) and

5′-UAUUCAAUAUAAUGUUUGUUGUC-3′ (SEQ ID NO:575);

5′-AACAAACAUUAUAUUGAAUA-3′ (SEQ ID NO:301) and

5′-AUAUUCAAUAUAAUGUUUGUUGU-3′ (SEQ ID NO:486);

5′-ACAAACAUUAUAUUGAAUAUU-3′ (SEQ ID NO:310) and

5′-AAUAUUCAAUAUAAUGUUUGUUG-3′ (SEQ ID NO:495);

5′-AACAUUAUAUUGAAUAUUCUU-3′ (SEQ ID NO:397) and

5′-AAGAAUAUUCAAUAUAAUGUUUG-3′ (SEQ ID NO:582);

5′-ACAUUAUAUUGAAUAUUCUUU-3′ (SEQ ID NO:348) and

5′-AAAGAAUAUUCAAUAUAAUGUUU-3′ (SEQ ID NO:533); and

5′-CAUUAUAUUGAAUAUUCUUUU-3′ (SEQ ID NO:274) and

5′-AAAAGAAUAUUCAAUAUAAUGUU-3′ (SEQ ID NO:459).

29. The dsRNA agent of claim 28 , wherein the sense and antisense strands comprise nucleotide sequences selected from the group consisting of

5′-GfuUfgGfaAfgAfCfUfgGfaAfaGfaCfaAf (SEQ ID NO: 747) and

5′-uUfgUfcUfuUfcCfaguCfuUfcCfaAfcsUfsc (SEQ ID NO:932);

5′-AfaAfgAfcAfaCfAfAfaCfaUfuAfuAfuUf (SEQ ID NO:634) and

5′-aAfuAfuAfaUfgUfuugUfuGfuCfuUfusCfsc (SEQ ID NO:819);

5′-GfaCfaAfcAfaAfCfAfuUfaUfaUfuGfaAf (SEQ ID NO:683) and

5′-uUfcAfaUfaUfaAfuguUfuGfuUfgUfcsUfsu (SEQ ID NO:868);

5′-AfcAfaCfaAfaCfAfUfuAfuAfuUfgAfaUf (SEQ ID NO:665) and

5′-aUfuCfaAfuAfuAfaugUfuUfgUfuGfusCfsu (SEQ ID NO:850);

5′-CfaAfcAfaAfcAfUfUfaUfaUfuGfaAfuAf (SEQ ID NO:760) and

5′-uAfuUfcAfaUfaUfaauGfuUfuGfuUfgsUfsc (SEQ ID NO:945);

5′-AfaCfaAfaCfaUfUfAfuAfuUfgAfaUfaUf (SEQ ID NO:671) and

5′-aUfaUfuCfaAfuAfuaaUfgUfuUfgUfusGfsu (SEQ ID NO:856);

5′-AfcAfaAfcAfuUfAfUfaUfuGfaAfuAfuUf (SEQ ID NO:680) and

5′-aAfuAfuUfcAfaUfauaAfuGfuUfuGfusUfsg (SEQ ID NO:865);

5′-AfaCfaUfuAfuAfUfUfgAfaUfaUfuCfuUf (SEQ ID NO:767) and

5′-aAfgAfaUfaUfuCfaauAfuAfaUfgUfusUfsg (SEQ ID NO:952);

5′-AfcAfuUfaUfaUfUfGfaAfuAfuUfcUfuUf (SEQ ID NO:718) and

5′-aAfaGfaAfuAfuUfcaaUfaUfaAfuGfusUfsu (SEQ ID NO:903); and

5′-CfaUfuAfuAfuUfGfAfaUfaUfuCfuUfuUf (SEQ ID NO:644) and

5′-aAfaAfgAfaUfaUfucaAfuAfuAfaUfgsUfsu (SEQ ID NO:829),

wherein a, g, c and u are 2′-O-methyl (2′-OMe) A, G, C, and U; Af, Gf, Cf and Uf are 2′-fluoro A, G, C and U; and s is a phosphorothioate linkage.

30. The pharmaceutical composition of claim 9 , further comprising a lipid formulation.

31. The pharmaceutical composition of claim 9 , wherein the dsRNA agent is present in a buffered solution.

Assignments (2)
SECURITY INTEREST Recorded Oct 1, 2025
From: ALNYLAM PHARMACEUTICALS, INC.; SIRNA THERAPEUTICS, INC.
To: BANK OF AMERICA, N.A.
Reel/Frame 072996/0337 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 12, 2017
From: BETTENCOURT, BRIAN; QUERBES, WILLIAM; FITZGERALD, KEVIN; FRANK-KAMENETSKY, MARIA; MILSTEIN, STUART; SHULGA-MORSKAYA, SVETLANA
To: ALNYLAM PHARMACEUTICALS, INC.
Reel/Frame 043559/0699 →
Continuity (6)
Continuation 15068912 · Mar 14, 2016
Continuation 14132999 · Dec 18, 2013
Continuation PCTUS2012043378 · Jun 20, 2012
Provisional Application 61638288 · Apr 25, 2012
Provisional Application 61499620 · Jun 21, 2011
Related Publication 20170355994A1 · Dec 14, 2017
Cited By (3)
US 12,467,051 US 12,492,401 US 12,545,914