Method and device for automated removal of cells and/or cell colonies

1. A method for automated removal of cells and/or cell colonies from a cell culture comprising:

scanning a vessel containing a cell culture;

executing a first detection step during said scanning step for selecting cells and/or cell colonies within the cell culture with reference to corporeal and/or physical parameters;

detecting position data and storing the detected position data of the selected cells and/or cell colonies in a position database;

scanning again the vessel in at least one region in which cells and/or cell colonies having the corporeal and/or physical parameters were found in the first detection step;

executing at least one second detection step for detecting at least one further parameter of the cells and/or cell colonies only in the at least one region in which cells and/or

cell colonies having the corporeal and/or physical parameters, were found in the first detection step;

creating comparative data from the data of the first and second detection steps and allocating the comparative data to the position data;

selecting cells and/or cell colonies having a plurality of specified properties with reference to the comparative data with the corporeal and/or physical parameters and by reference to specific criteria for different cell types;

transferring the position data linked to the comparative data from the position database to a harvesting unit;

removing selected cells and/or cell colonies from the cell culture by means of a removal tool of the harvesting unit; and

recording at least partial images of the cell culture during the scanning steps, wherein at least one of the first and second detection steps are carried out with reference to the partial images, wherein at least one image is recorded prior to removal of the selected cells and/or cell colonies from the cell culture, and at least one image is recorded after removal of the selected cells and/or cell colonies from the cell culture.

2. The method according to claim 1 , further comprising the steps of:

providing an xy table is provided as a support for the vessel of the cell culture, wherein the scanning step includes moving the vessel with the xy table.

3. The method according to claim 1 , wherein:

said recording step is further defined as recording an entirety of the partial images covering the cell culture during the scanning step, and wherein the method further comprises the step of:

combining image data of the partial images in an image evaluation unit to form image data of an overview image of the cell culture.

4. The method according to claim 3 , further comprising the step of:

making a determination of a shape centre of gravity of cells and/or cell colonies detected during the step of detecting position data by calculating a shape centre of gravity from each set of image points which pertain to the identified shape of the cell or cell colony, wherein coordinates of the shape centre of gravity are stored as the position data for the identified shape in the position database.

5. The method according to claim 4 , further comprising the step of:

determining at least one distance between forms identified during the step of making a determination, wherein the determined distance |Sij| between two shape centres of gravity Si and Sj and their coordinates (xi; yi) or (xj; yj) are calculated using the Pythagoras relationship

| Sij |=√[( xi−xj ) 2 +( yi−yj ) 2 ].

6. The method according to claim 5 , further comprising the step of:

displaying image data obtained during at least one of the scanning steps, the making a determination of a shape centre step, and the detecting position data step in real-time on a monitor.

7. The method according to claim 1 , wherein the second detection step includes recording different parameters with different fluorescence channels and excitation wavelengths.

8. The method according to claim 1 , further comprising the step of:

providing a first interactive selection list, wherein the interactive selection list allows an automated selection of cells and/or cell colonies and also a manual viewing of the position database and an examination and selection of the cells and/or cell colonies found in an automated manner.

9. The method according to claim 8 , wherein the providing step is further defined as:

providing the first interactive selection list, wherein the first interactive selection list contains at least coordinates of shape centres of gravity and image data and/or data from the first detection step.

10. The method according to claim 1 , further comprising the step of:

providing an interactive scatter diagram allowing an automated selection of the cells and/or cell colonies.

11. The method according to claim 10 , wherein the providing step is further defined as:

providing a first interactive selection list to contain at least the data from the second detection step and/or the comparative data.

12. The method according to claim 1 , further comprising the step of: selecting the cells and/or cell colonies by logic filters.

13. The method according to claim 1 , wherein said removing step is further defined as:

picking of cells and/or cell colonies from a semisolid nutrient substrate being one of agar or methyl cellulose by:

taking up a cannula tip;

positioning the tip over a cell and/or cell colony and enclosing the cell and/or cell colony; and

aspirating the cell and/or cell colony and the nutrient substrate in the vicinity of the cell and/or the cell colony into the tip.

14. The method according to claim 13 , wherein the aspirating step further comprises the step of

harvesting a cell colony whose size exceeds the usable diameter of the cannula tip successively in parts.

15. The method according to claim 13 , further comprising the step of:

dissolving individual parts out from a cell colony with the aid of the tip.

16. The method according to claim 13 , further comprising the step of:

dissolving individual regions out from solid cell groups.

17. The method according to claim 1 , wherein said removing step is further defined as:

picking of positionally fixed individual cells and/or individual colonies by:

filling a capillary with a fluid being one of air and a liquid in a calibrated quantity;

positioning the capillary opening above an individual cell and/or individual colony; and

aspirating a medium in the vicinity of the individual cell and/or individual colony into the capillary, wherein the individual cell and/or individual cell colony is picked into the capillary.

18. The method according to claim 17 , wherein the aspirating step further comprises the step of:

harvesting a cell colony whose size exceeds the usable diameter of the capillary successively in parts.

19. The method according to claim 17 , further comprising the step of:

dissolving individual parts out from a cell colony with the aid of the capillary.

20. The method according to claim 17 , further comprising the step of:

dissolving individual regions out from solid cell groups.

21. The method according to claim 1 , further comprising the steps of: sorting the cells and/or cell colonies by:

depositing the cells and/or cell colonies in a depositing container;

detecting the position data of the deposited cell and/or cell colony; and

processing the position data.