IP Library Granted Patent US 11,666,580
Granted Patent B2
US 11,666,580 · App. 15/751,914 · Granted Jun 6, 2023

Mechanism of resistance to bet bromodomain inhibitors

Inventors: Kornelia Polyak (Brookline, MA); Shaokun Shu (Brookline, MA); James E. Bradner (Weston, MA); Charles Yang Lin (Houston, TX)
Assignee: Dana-Farber Cancer Institute, Inc.
A61K31/551A61K31/137A61K31/5415A61K45/06A61P35/00G01N33/57415
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Quick Facts
Patent No.
US 11,666,580
App. No.
15/751,914
Granted
Jun 6, 2023
Kind
B2
Abstract

The present disclosure provides combination therapy comprising a BET inhibitor and a protein phosphatase 2A (PP2A) activator, a B-cell lymphoma-2 (Bcl-2) inhibitor, a B-cell lymphoma-extra large (Bcl-xl) inhibitor, a casein kinase 2 (CK2) inhibitor, and/or a mediator complex subunit 1 (MED1) for cancer. The combination therapy is expected to be synergistic in treating the cancer, compared to the monotherapy. Methods for identifying a subject having a cancer that is resistant to or at risk of developing resistance to bromodomain and extra terminal (BET) inhibitor therapy are also provided.

Claims (23)

1. A method for treating a cancer, the method comprising:

administering to a subject in need thereof a bromodomain and extra terminal (BET) inhibitor and a protein phosphatase 2A (PP2A) activator in an amount effective to treat the cancer, wherein the cancer is resistant to treatment by the BET inhibitor alone.

2. The method of claim 1 , wherein the BET inhibitor and the PP2A activator are synergistic in treating the cancer, compared to the BET inhibitor alone or the PP2A activator alone.

3. The method of claim 1 , wherein the BET inhibitor is a bromodomain-containing protein 2 (BRD2) inhibitor, bromodomain-containing protein 3 (BRD3) inhibitor, or bromodomain-containing protein 4 (BRD4) inhibitor.

4. The method of claim 3 , wherein the BET inhibitor is a small molecule.

5. The method of claim 4 , wherein the BET inhibitor is JQ1 or a derivative thereof.

6. The method of claim 1 , wherein the PP2A activator is a small molecule.

7. The method of claim 6 , wherein the PP2A activator is a phenothiazine compound or FTY720.

8. The method of claim 7 , wherein the phenothiazine compound is selected from the group consisting of chlorpromazine, mesoridazine, thioridazine, acetophenazine, fluphenazine, perphenazine, trifluoperazine and pharmaceutically acceptable salts and esters thereof.

9. The method of claim 1 , wherein the BET inhibitor and the PP2A activator are administered concurrently or sequentially.

10. The method of claim 5 , wherein the PP2A activator is a small molecule.

11. The method of claim 10 , wherein the PP2A activator is a phenothiazine compound or FTY720.

12. The method of claim 11 , wherein the phenothiazine compound is selected from the group consisting of chlorpromazine, mesoridazine, thioridazine, acetophenazine, fluphenazine, perphenazine, trifluoperazine and pharmaceutically acceptable salts and esters thereof.

13. A method for treating a cancer, the method comprising:

administering to a subject in need thereof a bromodomain and extra terminal (BET) inhibitor and a protein phosphatase 2A (PP2A) activator in an amount effective to treat the cancer, wherein the subject is identified as being in need thereof if a ratio of phosphorylated bromodomain-containing protein 4 (pBRD4) to un-phosphorylated BRD4 (BRD4) in a tumor sample obtained from the subject is increased as compared to a control ratio of pBRD4 to BRD4.

14. The method of claim 13 , wherein the BET inhibitor is JQ1 or a derivative thereof.

15. The method of claim 13 , wherein the PP2A activator is a phenothiazine compound or FTY720.

16. The method of claim 14 , wherein the PP2A activator is a phenothiazine compound or FTY720.

17. A method for treating a cancer, the method comprising:

administering to a subject in need thereof a bromodomain and extra terminal (BET) inhibitor and a protein phosphatase 2A (PP2A) activator in an amount effective to treat the cancer, wherein the subject is identified as being in need thereof if the BRD4 intracellular location of bromodomain-containing protein 4 (BRD4) in a tumor sample obtained from the subject is the nucleus.

18. The method of claim 17 , wherein the BET inhibitor is JQ1 or a derivative thereof.

19. The method of claim 17 , wherein the PP2A activator is a phenothiazine compound or FTY720.

20. The method of claim 18 , wherein the PP2A activator is a phenothiazine compound or FTY720.

Assignments (2)
CONFIRMATORY LICENSE Recorded Sep 13, 2021
From: DANA-FARBER CANCER INST
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 057494/0193 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 5, 2019
From: POLYAK, KORNELIA; SHU, SHAOKUN; BRADNER, JAMES E.; LIN, CHARLES YANG
To: DANA-FARBER CANCER INSTITUTE, INC.
Reel/Frame 049959/0408 →
Continuity (2)
Provisional Application 62203128 · Aug 10, 2015
Related Publication 20200368248A1 · Nov 26, 2020