IP Library Granted Patent US 11,229,710
Granted Patent B2
US 11,229,710 · App. 15/810,830 · Granted Jan 25, 2022

Environmentally sensitive compositions comprising a pH-triggered membrane protein and methods of use thereof in the treatment and diagnosis of tumors

Inventors: Yana K. Reshetnyak (South Kingstown, RI); Oleg A. Andreev (South Kingstown, RI); Donald M. Engelman (New Haven, CT)
Assignees: University of Rhode Island Board of Trustees; Yale University
A61K47/64A61K9/127A61K33/242A61K33/243A61K38/04A61K38/12A61K41/0095A61K47/54A61K47/6415A61K47/6425A61K48/0033A61K49/0056A61K49/085A61K49/14A61K51/08A61K51/088C07K7/06C07K14/001C07K14/705G01N33/574A61K33/244
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Quick Facts
Patent No.
US 11,229,710
App. No.
15/810,830
Granted
Jan 25, 2022
Kind
B2
Abstract

An environmentally sensitive membrane binding polypeptide, pH (low)-sensitive membrane peptide (pHLIP) has improved insertion kinetics balanced with solubility to selectively target acidic tissues.

Claims (38)

1. An environmentally sensitive composition comprising a pH-triggered membrane peptide comprising

(a) at least 8 contiguous amino acids of SEQ ID NO: 3-11, 14, 18, 19, 21, 24, 25, 31-37, 274, 275, or 283, wherein,

(b) at least 6 of the contiguous 8 amino acids of said membrane peptide are non-polar,

(c) at least one of the at least 8 amino acids of said membrane peptide is protonatable, and

(d) the peptide has a higher affinity to a membrane lipid bilayer at pH 5.0 compared to at pH 8.0, wherein said pH-triggered peptide does not comprise the amino acid sequence of SEQ ID NO: 1.

2. The composition of claim 1 , wherein the pH-triggered membrane peptide has 13-25 residues.

3. The composition of claim 1 , further comprising a single flanking domain at its N-terminus or at its C-terminus of said membrane peptide.

4. The composition of claim 3 , further comprising a first flanking domain at said C-terminus and a second flanking domain at said N-terminus.

5. The composition of claim 4 , further comprising a cargo attached to one of said flanking domains, wherein said cargo is selected from a therapeutic, diagnostic, radiation-enhancing, radiation-sensitizing, imaging, gene regulation, cytotoxic, apoptotic, or research reagent.

6. The composition of claim 5 , wherein said cargo is attached to said flanking region via a thiol linkage.

7. The composition of claim 1 , wherein one or more atoms are replaced by a radioactive isotope or a stable isotope.

8. The composition of claim 1 , wherein one or more of the amino acid side chains are chemically modified to render them radioactive or detectable by probing radiation.

9. The composition of claim 1 , comprising one or more cargoes attached to said peptide, wherein said cargo is used as a therapeutic, diagnostic, imaging, immune activation, gene regulation or cell function regulation agent, radiation-enhancing agent, radiation-sensitizing agent, or as a research tool.

10. The composition of claim 1 , for use as an agent to deliver a functional cargo across cell membranes to cells in a diseased tissue with a naturally acidic extracellular environment or in a tissue with an artificially induced acidic extracellular environment relative to normal physiological pH.

11. The composition of claim 10 , wherein said diseased tissue is selected from the group consisting of inflamed tissue, ischemic tissue, arthritic tissue, tissue infected with a microorganism, and atherosclerotic tissue.

12. The composition of claim 1 , for use as an agent to deliver a functional cargo to cell surfaces in a diseased tissue with a naturally acidic extracellular environment or in a tissue with an artificially induced acidic extracellular environment relative to normal physiological pH.

13. The composition of claim 5 , wherein said cargo comprises phalloidin, phallo toxin, amanitin toxin, a DNA intercalator, or a peptide nucleic acid.

14. The composition of claim 1 , wherein said sequence comprises residues 20-27 of SEQ ID NO: 3 or 18.

15. The composition of claim 5 , wherein said cargo comprises a dye, a fluorescent protein, a nanoparticle, or a radioactive isotope.

16. The composition of claim 15 , wherein the dye is a fluorescent dye.

17. The composition of claim 15 ,

(a) comprising a dye selected from the group consisting of rhodamine, Alexa Fluor® 750 dye, or Cy5.5;

(b) comprising a fluorescent protein, wherein the fluorescent protein is green fluorescent protein;

(c) comprising a nanoparticle that comprises gold; or

(d) comprising a radioactive isotope selected from the group consisting of Fluorine-18, Copper-64, Thallium-201, Iodine-123, Gallium-67, Strontium-82, Cadmium-113, Tellurium-123, Cobalt-60, or Technetium-99m.

18. The composition of claim 9 , comprising a magnetic resonance, positron emission tomography, single photon emission computed tomography, or fluorescence imaging agent.

19. The composition of claim 9 , comprising a positron emission tomography agent.

20. The composition of claim 19 , wherein said positron emission tomography agent comprises a Copper-64 or Fluorine-18 radioactive isotope.

21. A diagnostic conjugate comprising the composition of claim 1 and a pharmaceutically acceptable detectable marker linked thereto.

22. The conjugate of claim 21 , wherein said detectable marker comprises a dye.

23. The conjugate of claim 22 , wherein the dye comprises a fluorescent dye.

24. The conjugate of claim 21 , wherein said detectable marker comprises a nanoparticle.

25. A therapeutic conjugate comprising the composition of claim 1 , further comprising a first cargo comprising a cytotoxic agent and a second cargo comprising a hydrophobicity-balancing cargo.

26. The conjugate of claim 25 , wherein said cytotoxic agent is selected from the group consisting of phalloidin, phallo toxin, amanitin toxin, a boron-containing compound, and a DNA intercalator.

27. A method of determining the aggressiveness or risk of increased metastasis from a primary tumor, comprising contacting said tumor with the conjugate of claim 21 , wherein an increased level of binding of said composition compared to a control level of binding indicates the aggressiveness or risk of increased metastasis from said primary tumor.

28. The composition of claim 1 , wherein said composition further comprises a therapeutic cargo.

29. The composition of claim 28 , wherein the therapeutic cargo comprises phalloidin, phallo toxin, amanitin toxin, a DNA intercalator, or a peptide nucleic acid and wherein tumor cells are preferentially inhibited compared to normal non-tumor cells.

30. A method of guiding surgical tumor excision, comprising administering to an anatomical site comprising a tumor the conjugate of claim 21 , removing a primary tumor from said site, detecting residual tumor cells by binding of said conjugate to said residual tumor cells, and excising said residual tumor cells.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 12, 2021
From: RHODE ISLAND COUNCIL ON POSTSECONDARY EDUCATION
To: UNIVERSITY OF RHODE ISLAND BOARD OF TRUSTEES
Reel/Frame 056217/0728 →
CHANGE OF NAME Recorded May 6, 2020
From: RESHETNYAK, YANA K.; ANDREEV, OLEG A.
To: RHODE ISLAND COUNCIL ON POSTSECONDARY EDUCATION
Reel/Frame 052584/0872 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 6, 2020
From: RESHETNYAK, YANA K.; ANDREEV, OLEG A.
To: RHODE ISLAND BOARD OF GOVERNORS FOR HIGHER EDUCATION
Reel/Frame 051743/0791 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 6, 2020
From: ENGELMAN, DONALD M.
To: YALE UNIVERSITY
Reel/Frame 051743/0903 →
Continuity (4)
Continuation 15074581 · Mar 18, 2016
Continuation 13182441 · Jul 13, 2011
Provisional Application 61363891 · Jul 13, 2010
Related Publication 20180221500A1 · Aug 9, 2018
Cited By (2)
US 12,285,462 US 12,290,575