IP Library Granted Patent US 10,460,220
Granted Patent B2
US 10,460,220 · App. 15/970,257 · Granted Oct 29, 2019

Methods of storing information using nucleic acids

Inventor: George M. Church (Brookline, MA)
Assignee: President and Fellows of Harvard College
G06K19/022G06K19/00G06N3/123G16B30/00
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Quick Facts
Patent No.
US 10,460,220
App. No.
15/970,257
Granted
Oct 29, 2019
Kind
B2
Abstract

The present invention relates to methods of storing data using one or more nucleic acids.

Claims (34)

1. A method of making a medium for information storage using nucleotides comprising

converting a format of information into a plurality of bit sequences of a bit stream,

converting the plurality of bit sequences to a plurality of corresponding oligonucleotide sequences using one bit per base encoding, and

synthesizing the plurality of corresponding oligonucleotide sequences.

2. The method of claim 1 further comprising storing the synthesized plurality of corresponding oligonucleotide sequences.

3. The method of claim 2 wherein the oligonucleotide sequences are stored on a solid or semi-solid support.

4. The method of claim 2 wherein the oligonucleotide sequences are stored on a support selected from the group consisting of a slide, bead, chip, particle, strand, gel, sheet, tubing, sphere, container, capillary, pad, slice, film, and plate.

5. The method of claim 1 wherein the oligonucleotide sequences include one or more or all of a data block sequence, an address sequence specifying the location of the data block in the bit stream, or flanking common sequences at each end of the oligonucleotide for amplification and sequencing.

6. The method of claim 1 wherein synthesizing the plurality of corresponding oligonucleotide sequences comprises synthesizing the plurality of corresponding oligonucleotide sequences using a template-independent polymerase.

7. The method of claim 1 wherein synthesizing the plurality of corresponding oligonucleotide sequences comprises synthesizing the plurality of corresponding oligonucleotide sequences using terminal deoxynucleotidyl transferase or poly(A) polymerase.

8. The method of claim 1 wherein the nucleotides are A, C, G and T and wherein the A or C encodes for a first bit and G or T encodes for a second bit.

9. The method of claim 1 wherein the nucleotides are A, C, G and T and wherein the A or C encodes for zero and G or T encodes for 1.

10. A method of storing information using nucleic acids comprising

encoding a format of information into a plurality of polynucleotide sequences, and

synthesizing de novo the plurality of polynucleotide sequences on a support using a template independent polymerase.

11. The method of claim 10 wherein the step of synthesizing comprises

using a cyclic pattern of dNTP solutions and the template independent polymerase to incorporate the dNTP.

12. The method of claim 10 wherein the format of information is an HTML format of information.

13. The method of claim 10 wherein the format of information is an HTML format of information with embedded images.

14. The method of claim 10 wherein the format of information is text or an image.

15. The method of claim 10 wherein the format of information is converted to bit sequences which are encoded into the plurality of polynucleotide sequences.

16. The method of claim 10 wherein the template independent polymerase is terminal deoxynucleotidyl transferase or poly(A) polymerase.

17. The method of claim 10 wherein the support is a solid or semi-solid support.

18. The method of claim 10 wherein the support comprises spatially defined sites.

19. The method of claim 10 wherein the support comprises spatially defined addressable sites.

20. The method of claim 10 wherein the support is a member selected from the group consisting of a slide, bead, chip, particle, strand, gel, sheet, tubing, sphere, container, capillary, pad, slice, film, and plate.

21. The method of claim 10 wherein the support is a substantially planar support comprising tranches, grooves, wells or chemical barriers.

22. The method of claim 10 wherein the polynucleotide sequences are covalently attached to the support.

23. The method of claim 10 wherein the polynucleotide sequences are attached to the support with a cleavable linker.

24. The method of claim 10 where the plurality of polynucleotide sequences is synthesized on the support using ink jet techniques.

25. The method of claim 10 where the plurality of polynucleotide sequences is synthesized on the support using electrochemical.

26. The method of claim 10 where the plurality of polynucleotide sequences is synthesized on the support using microfluidic techniques.

27. The method of claim 10 wherein the polymerase function of the template independent polymerase is programmable by light.

28. The method of claim 10 wherein the base-specificity of the template independent polymerase is programmable by light.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 15, 2018
From: CHURCH, GEORGE M.
To: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
Reel/Frame 047162/0561 →
Continuity (5)
Continuation 15175430 · Jun 7, 2016
Continuation 14415014
Provisional Application 61676081 · Jul 26, 2012
Provisional Application 61673690 · Jul 19, 2012
Related Publication 20190258909A1 · Aug 22, 2019
Cited By (7)
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