In vitro assembly of bacterial microcompartments
The present disclosure is related to a BMC fusion protein that is capable of in vitro assembly, comprising a constituent BMC shell protein subunit and a sterically hindering protein domain that is cleavable. The BMC fusion protein is capable of in vitro assembly triggered by removal of the fused sterically hindering domain. The present disclosure is also related to a means to produce BMC shells in vitro, triggered by removal of a fused sterically hindering domain from one or more constituent BMC shell protein subunits. The BMC fusion protein enables encapsulation of broad classes of materials and biophysical studies of shell assembly, encapsulation, and permeability that would otherwise be unavailable from BMCs assembled in vivo.
1. A fusion protein, comprising:
a Bacterial Microcompartment (BMC) shell protein comprising one or more subunits and capable of assembling in vitro selected from the group consisting of: Hoch 5815 (SEQ ID NO: 1), Hoch 5812 (SEQ ID NO: 3), Hoch 3341 (SEQ ID NO: 5), Hoch 5816 (SEQ ID NO: 7), Hoch 4425 (SEQ ID NO: 9), Hoch 4426 (SEQ ID NO: 11) and Hoch 5814 (SEQ ID NO: 13); and
one or more sterically hindering protein domains comprising a Maltose Binding Protein (MBP) or a Short Ubiquitin-related Modifier (SUMO) protein operably linked to the one or more subunits of the BMC shell protein and capable of preventing assembly of the one or more subunits into bacterial microcompartment in vitro, wherein enzymatic removal of the one or more sterically hindering protein domains allow the one or more subunits of the BMC shell protein to form into bacterial micro compartments in vitro.
2. The fusion protein of claim 1 , wherein the sterically hindering protein is enzymatically removable from the BMC shell protein by a protease.
3. The fusion protein of claim 1 , wherein the protease is one of TEV protease, or U1p protease.
4. The fusion protein of claim 1 , further comprising a linker polypeptide operably linking the BMC shell proteins to the one or more sterically hindering protein domains.
5. The fusion protein of claim 4 , wherein the linker polypeptide is specifically cleavable by a protease.
6. A method of producing a bacterial microcompartment, comprising:
Providing a fusion protein of claim 1 comprising a BMC shell protein having one or more subunits and one or more sterically hindering protein domains operably linked to the BMC shell protein;
cleaving the fusion proteins to remove the sterically hindering protein domains; and
allowing bacterial micro compartments to form from the BMC shell proteins.