IP Library › Granted Patent US 11,413,351
Granted Patent B2
US 11,413,351 · App. 16/067,095 · Granted Aug 16, 2022

CNP prodrugs with carrier attachment at the ring moiety

Inventors: Harald Rau (Dossenheim, DE); Ulrich Hersel (Heidelberg, DE); Felix Cleemann (Mainz, DE); Caroline Elisabeth Rasmussen (Virum, DK)
Assignee: ASCENDIS PHARMA GROWTH DISORDERS A/S
A61K47/60A61K38/22
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Quick Facts
Patent No.
US 11,413,351
App. No.
16/067,095
Granted
Aug 16, 2022
Kind
B2
Abstract

The present invention relates to CNP prodrugs in which the carrier is covalently and reversibly attached to the ring moiety of a CNP moiety, to pharmaceutical compositions comprising such CNP prodrugs, to their uses and to methods of treating diseases that can be treated with the CNP prodrugs of the present invention.

Claims (58)

1. A C-type natriuretic peptide (CNP) prodrug or a pharmaceutically acceptable salt thereof comprising

a CNP moiety —D comprising a ring moiety, wherein the ring moiety has the amino acid sequence of SEQ ID NO:96, provided the methionine at position 11 of SEQ ID NO:96 can be substituted with asparagine, the ring moiety being between two cysteine residues forming a disulfide bridge; and

a non-toxic carrier moiety —Z that is conjugated through a moiety —L 2 — to a reversible prodrug linker moiety —L 1 —, which reversible prodrug linker moiety —L 1 — is covalently and reversibly conjugated to a side chain of an amino acid residue of said ring moiety of —D or to the backbone of said ring moiety of —D; and wherein —L 2 — is a chemical bond or a spacer.

2. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 1 — is covalently and reversibly conjugated to the side chain of an amino acid residue of the ring moiety of —D.

3. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 1 — is conjugated to the ring moiety of —D through a functional group of a corresponding CNP drug D-H selected from the group consisting of carboxylic acid, primary amine, hydroxyl, disulfide and guanidine.

4. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 1 — is connected to the ring moiety of —D through a linkage selected from the group consisting of amide, ester, carbamate, acetal, aminal, imine, oxime, hydrazone, disulfide and acylguanidine.

5. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein the amino acid residue of the ring moiety of —D to which —L 1 — is conjugated is selected from the group consisting of lysine, serine, aspartic acid and arginine.

6. The CNP prodrug or pharmaceutically acceptable salt thereof of claim 1 , wherein the amino acid residue of the ring moiety of —D to which —L 1 — is conjugated is lysine.

7. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —D has the sequence of SEQ ID NO:24.

8. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —D has the sequence of SEQ ID NO:24 and —L 1 — is conjugated to the lysine at position 26.

9. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 1 — is of formula (II):

wherein the dashed line indicates attachment to a nitrogen of an amino acid side chain of the ring moiety of the CNP moiety by forming an amide bond;

—X— is —C(R 4 R 4a )—; —N(R 4 )—; —O—; —C(R 4 R 4a )—C(R 5 R 5a )—; —C(R 5 R 5a )—C(R 4 R 4a )—; —C(R 4 R 4a )—N(R 6 )—; —N(R 6 )—C(R 4 R 4a )—; —C(R 4 R 4a )—O—; —O—C(R 4 R 4a )—; or —C(R 7 R 7a )—;

X 1 is C; or S(O);

—X 2 — is —C(R 8 R 8a )—; or —C(R 8 R 8a )—C(R 9 R 9a )—;

═X 3 is ═O; ═S; or ═N—CN;

—R 1 , —R 1a , —R 2 , —R 2a , —R 4 , —R 4a , —R 5 , —R 5a , —R 6 , —R 8 , —R 8a , —R 9 , —R 9a are independently selected from the group consisting of —H; and C 1-6 alkyl;

—R 3 , —R 3a are independently selected from the group consisting of —H; and C 1-6 alkyl, provided that in case one of —R 3 , —R 3a or both are other than —H they are connected to N to which they are attached through an sp 3 -hybridized carbon atom;

—R 7 is —N(R 10 R 10a ); or —NR 10 —(C═O)—R 11 ;

—R 7a , —R 10 , —R 10a , —R 11 are independently of each other —H; or C 1-6 alkyl;

optionally, one or more of the

pairs —R 1a /—R 4a , —R 1a /—R 5a , —R 1a /—R 7a , —R 4a /—R 5a , —R 8a /—R 9a form a chemical bond;

optionally, one or more of the

pairs —R 1 /—R 1a , —R 2 /—R 2a , —R 4 /—R 4a , —R 5 /—R 5a , —R 8 /—R 8a ,

—R 9 /—R 9a are joined together with the atom to which they are attached to form a C 3-10 cycloalkyl; or 3- to 10-membered heterocyclyl;

optionally, one or more of the

pairs —R 1 /—R 4 , —R 1 /—R 5 , —R 1 /—R 6 , —R 1 /—R 7a , —R 4 /—R 5 , —R 4 /—R 6 , —R 8 /—R 9 , —R 2 /—R 3 are joined together with the atoms to which they are attached to form a ring A;

optionally, R 3 /R 3a are joined together with the nitrogen atom to which they are attached to form a 3- to 10-membered heterocycle;

A is selected from the group consisting of phenyl; naphthyl; indenyl; indanyl; tetralinyl; C 3-10 cycloalkyl; 3- to 10-membered heterocyclyl; and 8- to 11-membered heterobicyclyl; and

wherein —L 1 — is substituted with —L 2 —Z and wherein —L 1 — is optionally further substituted, provided that the hydrogen marked with the asterisk in formula (II) is not replaced by —L 2 —Z or a substituent.

10. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 2 — is selected from the group consisting of -T-, —C(O)O—, —O—, —C(O)—, —C(O)N(R y1 )—, —S(O) 2 N(R y1 )—, —S(O)N(R y1 )—, —S(O) 2 —, —S(O)—, —N(R y1 )S(O) 2 N(R y1a )—, —S—, —N(R y1 )—, —OC(OR y1 )(R y1a )—, —N(R y1 )C(O)N(R y1a )—, —OC(O)N(R y1 )—, C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl; wherein -T-, C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally substituted with one or more —R 2 , which are the same or different and wherein C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally interrupted by one or more groups selected from the group consisting of -T-, —C(O)O—, —O—, —C(O)—, —C(O)N(R y3 )—, —S(O) 2 N(R y3 )—, —S(O)N(R y3 )—, —S(O) 2 —, —S(O)—, —N(R y3 )S(O) 2 N(R y3a )—, —S—, —N(R y3 )—, —OC(OR y3 )(R y3a )—, —N(R y3 )C(O)N(R y3a )—, and —OC(O)N(R y3 )—;

—R y1 and —R y1a are independently of each other selected from the group consisting of —H, -T, C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl; wherein -T, C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally substituted with one or more —R y2 , which are the same or different, and wherein C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally interrupted by one or more groups selected from the group consisting of -T-, —C(O)O—, —O—, —C(O)—, —C(O)N(R y4 )—, —S(O) 2 N(R y4 )—, —S(O)N(R y4 )—, —S(O) 2 —, —S(O)—, —N(R y4 )S(O) 2 N(R y4a )—, —S—, —N(R y4 )—, —OC(OR y4 )(R y4a )—, —N(R y4 )C(O)N(R y4a )—, and —OC(O)N(R y4a )—;

each T is independently selected from the group consisting of phenyl, naphthyl, indenyl, indanyl, tetralinyl, C 3-10 cycloalkyl, 3- to 10-membered heterocyclyl, 8- to 11-membered heterobicyclyl, 8- to 30-membered carbopolycyclyl, and 8- to 30-membered heteropolycyclyl; wherein each T is independently optionally substituted with one or more —R y2 , which are the same or different;

each —R y2 is independently selected from the group consisting of halogen, —CN, oxo (═O), —COOR y5 , —OR y5 , —C(O)R y5 , —C(O)N(R y5 R y5a ), —S(O) 2 N(R y5 R y5a ), —S(O)N(R y5 R y5a ), —S(O) 2 R y5 , —S(O)R y5 , —N(R y5 )S(O) 2 N(R y5a R y5b ), —SR y5 , —N(R y5 R y5a ), —NO 2 , —OC(O)R y5 , —N(R y5 )C(O)R y5a , —N(R y5 )S(O) 2 R y5a , —N(R y5 )S(O)R y5a , —N(R y5 )C(O)OR y5a , —N(R y5 )C(O)N(R y5a R y5b ), —OC(O)N(R y5 R y5a ), and C 1-6 alkyl; wherein C 1-6 alkyl is optionally substituted with one or more halogen, which are the same or different; and

each —R y3 , —R y3a , —R y4 , R y4a , —R y5 , —R y5a and —R y5b is independently selected from the group consisting of —H, and C 1-6 alkyl, wherein C 1-6 alkyl is optionally substituted with one or more halogen, which are the same or different.

11. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —Z comprises a branched polymer.

12. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 11 , wherein the branched moiety —Z has a molecular weight of 10 kDa to 80 kDa.

13. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —Z comprises a moiety of formula (a)

wherein

the dashed line indicates attachment to —L 2 — or to the remainder of —Z;

BP a is a branching point selected from the group consisting of —N<, —CR< and >C<;

—R is selected from the group consisting of —H and C 1-6 alkyl;

a is 0 if BP a is —N< or —CR< and a is 1 if BP a is >C<;

—S a —, —S a′ —, —S a″ — and —S a′″ — are independently of each other a chemical bond or are selected from the group consisting of C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl; wherein C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally substituted with one or more —R 1 , which are the same or different and wherein C 1-50 alkyl, C 2-50 alkenyl, and C 2-50 alkynyl are optionally interrupted by one or more groups selected from the group consisting of -T-, —C(O)O—, —O—, —C(O)—, —C(O)N(R 2 )—, —S(O) 2 N(R 2 )—, —S(O)N(R 2 )—, —S(O) 2 —, —S(O)—, —N(R 2 )S(O) 2 N(R 2a )—, —S—, —N(R 2 )—, —OC(OR 2 )(R 2a )—, —N(R 2 )C(O)N(R 2a )—, and —OC(O)N(R 2 )—;

each -T- is independently selected from the group consisting of phenyl, naphthyl, indenyl, indanyl, tetralinyl, C 3-10 cycloalkyl, 3- to 10-membered heterocyclyl, 8- to 11-membered heterobicyclyl, 8- to 30-membered carbopolycyclyl, and 8- to 30-membered heteropolycyclyl; wherein each -T- is independently optionally substituted with one or more —R 1 , which are the same or different;

each —R 1 is independently selected from the group consisting of halogen, —CN, oxo(═O), —COOR 3 , —OR 3 , —C(O)R 3 , —C(O)N(R 3 R 3a ), —S(O) 2 N(R 3 R 3a ), —S(O)N(R 3 R 3a ), —S(O) 2 R 3 , —S(O)R 3 , —N(R 3 )S(O) 2 N(R 3a R 3b ), —SR 3 , —N(R 3 R 3a ), —NO 2 , —OC(O)R 3 , —N(R 3 )C(O)R 3a , —N(R 3 )S(O) 2 R 3a , —N(R 3 )S(O)R 3a , —N(R 3 )C(O)OR 3a , —N(R 3 )C(O)N(R 3a R 3b ), —OC(O)N(R 3 R 3a ), and C 1-6 alkyl; wherein C 1-6 alkyl is optionally substituted with one or more halogen, which are the same or different;

each —R 2 , —R 2a , —R 3 , —R 3a and —R 3b is independently selected from the group consisting of —H, and C 1-6 alkyl, wherein C 1-6 alkyl is optionally substituted with one or more halogen, which are the same or different; and

—P a′ , —P a″ and —P a′″ are independently a polymeric moiety.

14. A pharmaceutical composition comprising at least one CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 and at least one excipient.

15. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —Z comprises a fatty acid derivative.

16. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —Z is a fatty acid derivative.

17. The CNP prodrug or a pharmaceutically acceptable salt thereof of claim 1 , wherein —L 1 — is of formula (V):

wherein the dashed line indicates attachment to an amine functional group of a side chain of an amino acid residue of the ring moiety of the CNP moiety;

—R 1 is selected from the group consisting of optionally substituted C 1 —C 6 linear, branched, or cyclic alkyl; optionally substituted aryl; optionally substituted heteroaryl; alkoxy; and —NR 5 2 ;

—R 2 is selected from the group consisting of —H; optionally substituted C 1 —C 6 alkyl; optionally substituted aryl; and optionally substituted heteroaryl;

—R 3 is selected from the group consisting of —H; optionally substituted C 1 —C 6 alkyl; optionally substituted aryl; and optionally substituted heteroaryl;

—R 4 is selected from the group consisting of —H; optionally substituted C 1 —C 6 alkyl; optionally substituted aryl; and optionally substituted heteroaryl; and

each —R 5 is independently of each other selected from the group consisting of —H; optionally substituted C 1 —C 6 alkyl; optionally substituted aryl; and optionally substituted heteroaryl; or when taken together two —R 5 can be cycloalkyl or cycloheteroalkyl.

Assignments (5)
CONFIRMATORY ASSIGNMENT Recorded Dec 19, 2023
From: SPROGØE, KENNETT
To: ASCENDIS PHARMA GROWTH DISORDERS A/S
Reel/Frame 066075/0686 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNMENT DOCUMENT PREVIOUSLY RECORDED AT REEL: 047160 FRAME: 0705. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT . Recorded Nov 30, 2022
From: RAU, HARALD; HERSEL, ULRICH; CLEEMANN, FELIX; RASMUSSEN, CAROLINE ELISABETH
To: ASCENDIS PHARMA GROWTH DISORDERS A/S
Reel/Frame 063348/0341 →
CORRECTIVE ASSIGNMENT TO CORRECT THE INSERTION OF CLAUSE RELATING TO CONSIDERATION RECEIVED BY ASSIGNORS PREVIOUSLY RECORDED AT REEL: 047160 FRAME: 0705. ASSIGNOR(S) HEREBY CONFIRMS THE CONFIRMATORY ASSIGNMENT. Recorded Sep 21, 2022
From: RAU, HARALD; HERSEL, ULRICH; CLEEMANN, FELIX; RASMUSSEN, CAROLINE ELISABETH
To: ASCENDIS PHARMA GROWTH DISORDERS A/S
Reel/Frame 062256/0473 →
CONFIRMATORY ASSIGNMENT Recorded Oct 12, 2018
From: RAU, HARALD; HERSEL, ULRICH; CLEEMANN, FELIX; RASMUSSEN, CAROLINE ELISABETH
To: ASCENDIS PHARMA GROWTH DISORDERS A/S
Reel/Frame 047223/0508 →
CONFIRMATORY ASSIGNMENT Recorded Sep 28, 2018
From: RAU, HARALD; HERSEL, ULRICH; CLEEMANN, FELIX; RASMUSSEN, CAROLINE ELISABETH
To: ASCENDIS PHARMA GROWTH DISORDERS A/S
Reel/Frame 047160/0705 →
Priority Claims (3)
EP 16150625 · Jan 8, 2016 · regional
EP 16179288 · Jul 13, 2016 · regional
EP 16191460 · Sep 29, 2016 · regional
Continuity (1)
Related Publication 20190008977A1 · Jan 10, 2019
Cited By (4)
US 12,239,689 US 12,377,133 US 12,544,428 US 12,667,604