IP Library Granted Patent US 10,689,397
Granted Patent B2
US 10,689,397 · App. 16/269,468 · Granted Jun 23, 2020

ULK1 inhibitors and methods using same

Inventors: Reuben J. Shaw (La Jolla, CA); Daniel F. Egan (La Jolla, CA); Nicholas Cosford (La Jolla, CA); Benjamin Turk (New Haven, CT); Mitchell Vamos (La Jolla, CA); Dhanya Raveendra Panickar (La Jolla, CA); Matthew Chun (La Jolla, CA); Douglas Sheffler (La Jolla, CA)
Assignees: SALK INSTITUTE FOR BIOLOGICAL STUDIES; SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE; YALE UNIVERSITY
C07D498/04A61K31/505A61K31/506A61K31/5377A61K31/5383A61K45/06C07D239/34C07D239/42C07D239/47C07D239/48C07D239/557C07D401/12C07D401/14C07D403/12C07D405/12C07D405/14C07D413/14C07D417/04C07D417/12C07D417/14C07D471/04C07K7/08C12Q1/485C12Y207/11001G01N2333/912G01N2500/04G01N2500/20G01N2800/52
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Quick Facts
Patent No.
US 10,689,397
App. No.
16/269,468
Granted
Jun 23, 2020
Kind
B2
Abstract

In certain aspects, the invention provides a method for treating a disease or condition in a subject, the method comprising co-administering to a subject in need thereof a therapeutically effective amount of at least one ULK1-inhibiting pyrimidine, and a therapeutically effective amount of an mTOR inhibitor.

Claims (52)

1. A compound, or pharmaceutically acceptable salt thereof, having a structure of Formula A:

wherein in Formula A:

R 10 is selected from the group consisting of: halogen; OR 11 wherein R 11 is H, optionally substituted aryl, or optionally substituted heteroaryl; and NR 1 R 2 wherein R 1 is H or alkyl and R 2 is selected from the group consisting of H, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, and optionally substituted alkyl, wherein the aryl or heteroaryl of R 2 is optionally substituted with one or more substituent, wherein each substituent of the aryl or heteroaryl of R 2 is selected from the group consisting of alkyl, alkynyl, alkenyl, aryl, halide, nitro, amino, ester, ketone, aldehyde, hydroxy, carboxylic acid, and alkoxy;

R 4 is optionally substituted aryloxy, optionally substituted heteroaryloxy, optionally substituted alkoxy, N-heterocyclic, optionally substituted thiol, optionally substituted alkyl, or hydroxyl;

R 5 is selected from the group consisting of hydroxyl, substituted alkyl, chloro, bromo, substituted alkoxy, optionally substituted aryl, optionally substituted carboxyl, cyano, and nitro, or R 5 and R 6 together form a cyclic structure;

wherein each substituent of the substituted alkyl of R 5 is selected from the group consisting of halogen, cycloalkyl, alkoxy, amino, hydroxyl, and carboxyl; and

R 6 is H or haloalkyl.

2. The compound of claim 1 , wherein

R 10 is NR 1 R 2 ;

R 1 is H;

R 2 is selected from the group consisting of

and

R 6 is H.

3. The compound of claim 1 , wherein

R 10 is NR 1 R 2 ;

R 1 is H;

R 2 is selected from the group consisting of

and

R 6 is H.

4. The compound of claim 1 , wherein

R 10 is NR 1 R 2 ;

R 2 is an alkoxy-substituted phenyl.

5. The compound of claim 4 , wherein R 2 is

6. The compound of claim 1 , wherein R 5 is selected from the group consisting of haloalkyl, chloro, and bromo.

7. The compound of claim 6 , wherein R 5 is CF 3 .

8. The compound of claim 1 , wherein R 4 is optionally substituted aryloxy.

9. The compound of claim 1 , wherein R 4 is optionally substituted heteroaryloxy.

10. The compound of claim 1 , wherein R 6 is H.

11. A compound, or pharmaceutically acceptable salt thereof, having a structure of:

wherein:

R 1 is H or alkyl;

R 2 is

R 4 is optionally substituted aryloxy, optionally substituted heteroaryloxy, optionally substituted alkoxy, or NR 7 R 8 , wherein R 7 is H or alkyl and R 8 is optionally substituted aryl, cyclopropyl, or N-alkylbenzamide, wherein the aryloxy or heteroaryloxy of R 4 is optionally substituted with one or more substituent, wherein each substituent of the aryloxy or heteroaryloxy of R 4 is selected from the group consisting of alkyl, alkynyl, alkenyl, aryl, halide, nitro, amino, ester, ketone, aldehyde, hydroxy, carboxylic acid, and alkoxy;

R 5 is H, hydroxyl, optionally substituted alkyl, halo, optionally substituted alkoxy, and optionally substituted aryl;

wherein each substituent of the substituted alkyl of R 5 is selected from the group consisting of halogen, cycloalkyl, alkoxy, amino, hydroxyl, and carboxyl; and

R 6 is H or haloalkyl.

12. The compound of claim 11 , wherein R 4 is optionally substituted aryloxy or optionally substituted heteroaryloxy.

13. The compound of claim 11 , wherein R 4 is NR 7 R 8 , wherein R 7 is H and R 8 is N-alkylbenzamide.

14. The compound of claim 11 , wherein R 5 is haloalkyl, chloro, or bromo.

15. The compound of claim 11 , wherein R 6 is H.

16. A compound, or pharmaceutically acceptable salt thereof, having a structure of:

wherein:

R 1 is H or alkyl;

R 2 is

R 4 is optionally substituted aryloxy, optionally substituted heteroaryloxy, optionally substituted alkoxy, or NR 7 R 8 , wherein R 7 is H or alkyl and R 8 is optionally substituted aryl, optionally substituted heteroaryl, cycloalkyl, N-alkylbenzamide, or alkyl optionally substituted one or more substituent, wherein each substituent of the alkyl of R 8 is selected from the group consisting of halogen, cycloalkyl, alkoxy, amino, hydroxyl, aryl, alkenyl, or carboxyl;

wherein the aryloxy or heteroaryloxy of R 4 is optionally substituted with one or more substituent, wherein each substituent of the aryl, heteroaryl, aryloxy or heteroaryloxy of R 4 is selected from the group consisting of alkyl, alkynyl, alkenyl, aryl, halide, nitro, amino, ester, ketone, aldehyde, hydroxy, carboxylic acid, and alkoxy;

R 5 is haloalkyl; and

R 6 is H or haloalkyl.

17. The compound of claim 16 , wherein R 4 is NR 7 R 8 , wherein R 7 is H and R 8 is optionally substituted aryl, optionally substituted heteroaryl, cycloalkyl, N-alkylbenzamide, or alkyl optionally substituted one or more substituent, wherein each substituent of the alkyl of R 8 is selected from the group consisting of halogen, cycloalkyl, alkoxy, amino, hydroxyl, aryl, alkenyl, or carboxyl.

18. The compound of claim 17 , wherein R 8 is alkyl optionally substituted with halogen.

19. The compound of claim 17 , wherein R 8 is cycloalkyl.

20. The compound of claim 16 , wherein R 4 is optionally substituted aryloxy or optionally substituted heteroaryloxy.

Assignments (8)
CORRECTIVE ASSIGNMENT TO CORRECT THE SPELLING OF ASSIGNEE NAME IS SALK INSTITUTE FOR BIOLOGICAL STUDIES AS SET FOURTH ON THE ASSIGNMENT DOCUMENT PREVIOUSLY RECORDED AT REEL: 051237 FRAME: 0259. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jan 14, 2020
From: HOWARD HUGHES MEDICAL INSTITUTE
To: SALK INSTITUTE FOR BIOLOGICAL STUDIES
Reel/Frame 051594/0920 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 10, 2019
From: HOWARD HUGHES MEDICAL INSTITUTE
To: SALK INSTUTUTE FOR BIOLOGICAL STUDIES
Reel/Frame 051237/0259 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 10, 2019
From: SHEFFLER, DOUGLAS; COSFORD, NICHOLAS; PANICKAR, DHANYA RAVEENDRA; VAMOS, MITCHELL
To: SANFORD-BURNHAM MEDICAL RESEARCH INSTITUTE
Reel/Frame 051237/0287 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 10, 2019
From: CHUN, MATTHEW; EGAN, DANIEL
To: SALK INSTITUTE FOR BIOLOGICAL STUDIES
Reel/Frame 051237/0302 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 10, 2019
From: SHAW, REUBEN J., PH.D
To: HOWARD HUGHES MEDICAL INSTITUTE
Reel/Frame 051237/0231 →
APPOINTMENT OF INVESTIGATOR AS AGENT Recorded Dec 10, 2019
From: HOWARD HUGHES MEDICAL INSTITUTE
To: SHAW, REUBEN J., PH.D
Reel/Frame 051244/0393 →
CHANGE OF NAME Recorded Dec 10, 2019
From: SANFORD-BURNHAM MEDICAL RESEARCH INSTITUTE
To: SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE
Reel/Frame 051244/0396 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 10, 2019
From: TURK, BENJAMIN
To: YALE UNIVERSITY
Reel/Frame 051237/0324 →
Continuity (4)
Continuation 15505532
Provisional Application 62184212 · Jun 24, 2015
Provisional Application 62041559 · Aug 25, 2014
Related Publication 20190152989A1 · May 23, 2019