Use of octaketide synthases to produce kermesic acid and flavokermesic acid
A method for producing an octaketide derived aromatic compound of interest (e.g. carminic acid), wherein the method comprises (I): heterologous expression of a recombinantly introduced Type III polyketide synthase (PKS) gene encoding an octaketide synthase (OKS) to obtain non-reduced octaketide in vivo within the recombinant host cell and (II): converting in vivo the non-reduced octaketide of step (I) into a C 14 -C 34 aromatic compound of interest (e.g. carminic acid).
1. A method for producing an octaketide derived aromatic compound, wherein the method comprises:
(I): contacting in vivo in a recombinant host cell comprising a recombinantly introduced Type III polyketide synthase (PKS) gene encoding an octaketide synthase (OKS), wherein the OKS is of a different genus than the host cell:
(i): a starter unit and an extender unit with said OKS such that the starter and extender units convert into a non-reduced octaketide;
(II): converting in vivo within the recombinant host cell the non-reduced octaketide of step (I) into a C 14 -C 34 aromatic aglycon compound via at least one in trans acting aromatase/cyclase, wherein the aromatic aglycon compound is not SEK4 and/or SEK4B;
(III): the recombinant host cell further comprises a glycosyltransferase gene encoding a glycosyltransferase having at least 90% sequence identity to SEQ ID NO: 2 or amino acids 1 to 468 of SEQ ID NO:2, which glycosylates the aromatic aglycon compound produced in step (II) into a C 14 -C 34 aromatic glycoside compound; and
(IV): isolating the aromatic glycoside compound of step (III) so as to get a composition, wherein the composition comprises less than 1% w/w dry matter of recombinant host cell material, and wherein the recombinant host cell is a yeast cell.
2. The method of claim 1 , wherein the recombinant host cell is a growing recombinant host cell and step (I) and step (II) comprise:
(I): contacting in vivo in a growing recombinant host cell comprising a recombinantly introduced Type III polyketide synthase (PKS) gene encoding an octaketide synthase (OKS), wherein the OKS is of a different genus than the host cell:
(i): a starter unit and an extender unit with said OKS such that the starter and extender units convert into a non-reduced octaketide; and
(II): converting in vivo within the growing recombinant host cell the non-reduced octaketide of step (I) into a C 14 -C 34 aromatic aglycon compound, wherein the aromatic aglycon compound is not SEK4 and/or SEK4B.
3. The method according to claim 1 , wherein the yeast cell is an S. cerevisiae.
4. The method according to claim 1 , wherein the Type III polyketide synthase (PKS) gene of step (I) is a PKS gene from a plant and wherein the plant is a plant selected from the group consisting of: Aloe spp. and Hypericum spp.
5. The method of claim 4 , wherein the octaketide synthase (OKS) in step (I) is a OKS comprising an amino acid sequence which has at least 90% sequence identity with amino acids 1 to 403 of SEQ ID NO:7 (AaOKS).
6. The method of claim 4 , wherein the octaketide synthase (OKS) in step (I) is a OKS comprising an amino acid sequence which has at least 90% sequence identity with amino acids 1 to 393 of SEQ ID NO:15 (HpPKS2).
7. The method according to claim 1 , wherein the starter unit is acetyl-CoA and/or malonyl-CoA.
8. The method according to claim 1 , wherein:
the OKS of a different genus than the host cell is an OKS selected from the group consisting of: OKS from Aloe spp. and Hypericum spp.
9. The method according to claim 1 , wherein the aromatic aglycon compound is a C 16 aromatic aglycon compound.
10. The method according to claim 9 , wherein the C 16 aromatic aglycon compound is flavokermesic acid (FK) or kermesic acid (KA).
11. The method of claim 1 , wherein the aromatase/cyclase is a aromatase/cyclase comprising an amino acid sequence, which has at least 90% sequence identity with amino acids 1 to 169 of SEQ ID NO:17 ( Streptomyces Zhul); or wherein the aromatase/cyclase is a aromatase/cyclase comprising an amino acid sequence, which has at least 90% sequence identity with amino acids 1 to 256 of SEQ ID NO:19 ( Streptomyces ZhuJ).
12. The method of claim 1 , wherein the aromatic glycoside compound of interest is a C 16 aromatic glycoside compound and, wherein the C 16 aromatic glycoside compound is a flavokermesic acid glycoside or a kermesic acid glycoside.
13. The method of claim 12 , wherein the C 16 aromatic glycoside compound is a flavokermesic acid glycoside and the flavokermesic acid glycoside is DcII.
14. The method of claim 12 , wherein the C 16 aromatic glycoside compound is a kermesic acid glycoside and the kermesic acid glycoside is carminic acid (CA).