Fast multiphoton microscope
The invention provides improved systems and methods for multiphoton microscopy including pixel clocking techniques for minimizing pixel integration time and providing consistent signal intensity with maximized imaging speeds. Various systems and method are described for optimizing laser repetition rate based on dye lifetime, combining polygonal mirror scanning and stage translation, using the laser pulse signal to time pixel collection, and minimizing laser pulses and dye usage based on signal to background ratios.
1. A multiphoton microscope comprising:
a pulsed light source;
a focusing system operable to focus light pulses from the pulsed light source onto a sample on a sample stage;
a scanning system operable to move a focal point of the light pulses relative to the sample; and
a pixel clock operable to assign fluorescence signal to each pixel in a recorded image wherein each pixel integrates signal over a fixed integral number of light pulse interpulse intervals.
2. The multiphoton microscope of claim 1 wherein the scanning system comprises a spinning polygon mirror.
3. The multiphoton microscope of claim 2 wherein the scanning system is operable to perform a translation of the sample stage in a direction perpendicular to a scanning direction of the spinning polygon mirror to image a strip of sample having a width defined by the spinning polygon mirror scan and a length defined by the sample stage translation.
4. The multiphoton microscope of claim 1 wherein the integral number of light pulses is between 1 and 100.
5. The multiphoton microscope of claim 1 wherein the pulsed light source comprises a pulse repetition rate of about 70 MHz to about 1 GHz.
6. The multiphoton microscope of claim 5 wherein the pulsed light source is a laser.
7. The multiphoton microscope of claim 5 wherein the pulsed light source comprises an ultrafast laser, a beamsplitter, and a delay line.
8. The multiphoton microscope of claim 1 wherein the light source interpulse interval is between about 1 and about 3 times a fluorescent lifetime of a fluorescent dye in the sample.
9. A method for imaging a sample using a multiphoton microscope, the method comprising:
loading a sample that has been exposed to a fluorescent dye into the multiphoton microscope, the multiphoton microscope comprising:
a pulsed light source;
a focusing system operable to focus light pulses from the pulsed light source onto a sample on a sample stage;
a scanning system operable to move a focal point of the light pulses relative to the sample; and
a pixel clock operable to assign fluorescence signal to each pixel in a recorded image over a pixel dwell time;
imaging the sample using the multiphoton microscope wherein the pixel dwell time is a fixed integral number of light pulse interpulse intervals.
10. The method of claim 9 wherein the scanning system comprises a spinning polygon mirror.
11. The method of claim 10 wherein imaging the sample comprises the scanning system performing a translation of the sample stage in a direction largely perpendicular to a scanning direction of the spinning polygon mirror to image a strip of sample having a width defined by the spinning polygon mirror scan and a length defined by the sample stage translation.
12. The method of claim 9 wherein the integral number of light pulses is between 1 and 100.
13. The method of claim 9 wherein the pulsed light source is pulsed at a rate of about 70 MHz to about 1 GHz.
14. The method of claim 13 wherein the pulsed light source is a laser.
15. The method of claim 13 wherein the pulsed light source comprises an ultrafast laser, a beamsplitter, and a delay line.
16. The method of claim 9 wherein the light source interpulse interval is between about 1 and about 3 times a fluorescent lifetime of the fluorescent dye.