IP Library Granted Patent US 11,702,465
Granted Patent B1
US 11,702,465 · App. 17/033,516 · Granted Jul 18, 2023

Synthetic anti-plague antibodies

Inventors: Antonietta Maria Lillo (Los Alamos, NM); Nileena Velappan (Los Alamos, NM); Armand Earl Ko Dichosa (Los Alamos, NM); Stosh Anthony Kozimor (Los Alamos, NM); Laura Margaret Lilley (Los Alamos, NM)
Assignee: Triad National Security, LLC
C07K16/1228A61K51/1009A61P31/06G01N33/56916A61K2039/505C07K2317/565C07K2317/76C07K2317/92C07K2317/94C07K2319/30G01N2800/26
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Quick Facts
Patent No.
US 11,702,465
App. No.
17/033,516
Granted
Jul 18, 2023
Kind
B1
Abstract

Monoclonal antibodies that specifically bind the F1 antigen of Yersinia pestis with high affinity are described. Use of the monoclonal antibodies for the detection of Y. pestis infection and the diagnosis of plague are also described. Immunoconjugates of the monoclonal antibodies and a radionuclide can also be used for the treatment of a Y. pestis infection.

Claims (36)

1. A monoclonal antibody that specifically binds Yersinia pestis F1 antigen, comprising a variable light (VL) domain and a variable heavy (VH) domain, wherein:

the VL domain comprises the complementarity determining region 1 (CDR1), CDR2 and CDR3 sequences of SEQ ID NO: 1 and the VH domain comprises the CDR1, CDR2 and CDR3 sequences of SEQ ID NO: 2; or

the VL domain comprises the CDR1, CDR2 and CDR3 sequences of SEQ ID NO: 3 and the VH domain comprises the CDR1, CDR2 and CDR3 sequences of SEQ ID NO: 4.

2. The monoclonal antibody of claim 1 , wherein the CDR sequences are determined using the method of Kabat, IMGT or Chothia.

3. The monoclonal antibody of claim 1 , wherein:

the VL domain CDR1, CDR2 and CDR3 sequences respectively comprise residues 23-33, 49-55 and 88-96 of SEQ ID NO: 1 and the VH domain CDR1, CDR2 and CDR3 sequences respectively comprise residues 26-35, 52-60 and 100-108 of SEQ ID NO: 2; or

the VL domain CDR1, CDR2 and CDR3 sequences respectively comprise residues 24-34, 50-56 and 90-97 of SEQ ID NO: 3 and the VH domain CDR1, CDR2 and CDR3 sequences respectively comprise residues 26-35, 52-59 and 98-104 of SEQ ID NO: 4.

4. The monoclonal antibody of claim 3 , wherein:

the amino acid sequence of the VL domain is at least 90% identical to residues 1-107 of SEQ ID NO: 1 and the amino acid sequence of the VH domain is at least 90% identical to residues 1-119 of SEQ ID NO: 2; or

the amino acid sequence of the VL domain is at least 90% identical to residues 1-106 of SEQ ID NO: 3; and the amino acid sequence of the VH domain is at least 90% identical to residues 1-115 of SEQ ID NO: 4.

5. The monoclonal antibody of claim 4 , wherein:

the amino acid sequence of the VL domain comprises or consists of residues 1-107 of SEQ ID NO: 1 and the amino acid sequence of the VH domain comprises or consists of residues 1-119 of SEQ ID NO: 2; or

the amino acid sequence of the VL domain comprises or consists of residues 1-106 of SEQ ID NO: 3 and the amino acid sequence of the VH domain comprises or consists of residues 1-115 of SEQ ID NO: 4.

6. The monoclonal antibody of claim 1 , wherein the monoclonal antibody is an antigen-binding fragment selected from an Fab fragment, an Fab′ fragment, an F(ab)′ 2 fragment, a single chain variable fragment (scFv) and a disulfide stabilized variable fragment (dsFv).

7. The monoclonal antibody of claim 1 , wherein the antibody is an IgG.

8. The monoclonal antibody of claim 7 , comprising:

a light chain comprising the amino acid sequence of SEQ ID NO: 1 and a heavy chain comprising the amino acid sequence of SEQ ID NO: 2; or

a light chain comprising the amino acid sequence of SEQ ID NO: 3 and a heavy chain comprising the amino acid sequence of SEQ ID NO: 4.

9. The monoclonal antibody of claim 1 , wherein the monoclonal antibody is a human antibody or a chimeric antibody.

10. An immunoconjugate comprising the monoclonal antibody of claim 1 and an effector molecule.

11. The immunoconjugate of claim 10 , wherein the effector molecule is a detectable label or a radionuclide.

12. The immunoconjugate of claim 11 , wherein the immunoconjugate comprises a chelator and the radionuclide is bound to the chelator.

13. The immunoconjugate of claim 12 , wherein the chelator is diethylene-triamine-pentaacetic acid (DTPA), cyclohexane-diethylene-triamine-pentaacetic-acid (CHX-DTPA), p-isothiocyanatobenzyl-diethylenetriaminepentaacetic acid (p-SCN-Bz-DTPA), ethylenediamine-tetraacetic acid (EDTA), 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA), p-isothiocyanatobenzyl-1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (p-SCN-Bz-DOTA), 1,4,7-triazacyclononane-N,N′,N″-triacetetate (NOTA), ethylenediamine tetra(methylene phosphonic acid) (EDTMP), 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetra(methylene phosphonic acid) (DOTMP), N-chloro-p-toluenesulfonamide, tetrachloro-3-6α-diphenylglycouril-3, (2-(4-isothiocyanatobenzyl-1,4,7,10-tetraaza-1,4,7,10,tetra-(2-carbamonyl-methyl)-cyclododecane) (TCMC), tris(hydroxypyridinone) (THP), or desferrioxamine (DFO).

14. The immunoconjugate of claim 12 , wherein the radionuclide is 99m Tc, 123 I, 125 I, 131 I, 111 In, 97 Ru, 64 Cu, 67 Ga, 68 Ga, 72 As, 89 Zr, 90 Y or 201 Tl.

15. A fusion protein, comprising the monoclonal antibody of claim 1 and a heterologous protein or peptide.

16. An isolated nucleic acid molecule encoding the monoclonal antibody of claim 1 .

17. A vector comprising the nucleic acid molecule of claim 16 .

18. A host cell comprising the vector of claim 17 .

19. A composition comprising the monoclonal antibody of claim 1 and a pharmaceutically acceptable carrier.

20. A method of treating a Yersinia pestis infection in a subject, comprising administering to the subject a therapeutically effective amount of the monoclonal antibody of claim 1 , thereby treating the Y. pestis infection in the subject.

21. A method of detecting Yersinia pestis in a sample, comprising:

contacting the sample with the monoclonal antibody of claim 1 ; and

detecting binding of the monoclonal antibody to the sample, thereby detecting Y. pestis in the sample.

22. A method of detecting F1 antigen or an F1-expressing Y. pestis in a sample, comprising:

contacting the sample with the monoclonal antibody of claim 1 ; and

detecting binding of the monoclonal antibody to the sample, thereby detecting F1 antigen or F1-expressing Y. pestis in the sample.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 13, 2021
From: LILLO, ANTONIETTA MARIA; VELAPPAN, NILEENA; DICHOSA, ARMAND EARL KO; KOZIMOR, STOSH ANTHONY; LILLEY, LAURA MARGARET
To: TRIAD NATIONAL SECURITY, LLC
Reel/Frame 057175/0909 →
CONFIRMATORY LICENSE Recorded Apr 9, 2021
From: TRIAD NATIONAL SECURITY, LLC
To: U.S. DEPARTMENT OF ENERGY
Reel/Frame 055879/0601 →
Continuity (1)
Provisional Application 62905858 · Sep 25, 2019