Hydrolase and method for producing (1S,2S)-1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid using same
The present invention provides a novel hydrolase that can industrially produce optically highly pure (1S,2S)-1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid with high efficiency at low costs, and a production method using the hydrolase.
1. A hydrolase consisting of a variant of the amino acid sequence shown in SEQ ID NO: 2 with at least 5 and up to 50 amino acid substitutions, deletions, insertions, and/or additions.
2. A nucleic acid encoding the hydrolase according to claim 1 .
3. The nucleic acid according to claim 2 , wherein the aforementioned nucleic acid comprises a base sequence of the base sequence shown in SEQ ID NO: 1, with at least 15 and up to 150 nucleotide substitutions, deletions, insertions and/or additions.
4. A method for producing (1S,2S)-1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid, comprising bringing a hydrolase, a microorganism or cell having an ability to produce the hydrolase, and/or a culture solution containing the hydrolase into contact with dialkyl 2-vinylcyclopropane-1,1-dicarboxylic acid, wherein the hydrolase comprises a polypeptide of the following (a), (b), (c), or (d):
(a) a polypeptide consisting of the amino acid sequence shown in SEQ ID NO: 2;
(b) a polypeptide having an amino acid sequence resulting from the deletion, insertion, substitution, and/or addition of one to 5 amino acids in the amino acid sequence shown in SEQ ID NO: 2, and an activity to catalyze the reaction shown in the formula (1)
wherein R is an alkyl group having 1-6 carbon atoms in the formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(c) a polypeptide consisting of an amino acid sequence with not less than 95% of sequence identity with the amino acid sequence shown in SEQ ID NO: 2, and an activity to catalyze the reaction shown in the above-mentioned formula (1), wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(d) a polypeptide consisting of an amino acid sequence with not less than 90% of sequence identity with the amino acid sequence shown in SEQ ID NO: 2, wherein the aforementioned amino acid sequence comprises
(i) 5 consecutive residues DATRG corresponding to residues 75-79 of SEQ ID NO: 2;
(ii) 4 consecutive residues PYGF corresponding to residues 133-136 of SEQ ID NO: 2;
(iii) 4 consecutive residues NWPG corresponding to residues 224-227 of SEQ ID NO: 2; and/or
(iv) 5 consecutive residues PGWPG corresponding to residues 287-291 of SEQ ID NO: 2, and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%.
5. The production method according to claim 4 , wherein R in the formula (1) is an ethyl group.
6. A recombinant vector comprising the nucleic acid according to claim 2 .
7. A transformant comprising the recombinant vector according to claim 6 .
8. The production method according to claim 4 , wherein the microorganism or cell is a microorganism or cell transformed with a nucleic acid comprising a base sequence of the following (e), (f), (g), or (h):
(e) the base sequence shown in SEQ ID NO: 1;
(f) a nucleic acid consisting of a base sequence resulting from the substitution, deletion, and/or addition of one to 15 bases in the base sequence shown in SEQ ID NO: 1, and encoding a polypeptide having an activity to catalyze the reaction shown in the formula (1)
wherein R is an alkyl group having 1-6 carbon atoms in the formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(g) a nucleic acid consisting of a base sequence having not less than 98% of sequence identity with the base sequence shown in SEQ ID NO: 1, and encoding a polypeptide having an activity to catalyze the reaction shown in the above-mentioned formula (1);
(h) a nucleic acid having a base sequence that hybridizes with a complementary strand of the base sequence shown in SEQ ID NO: 1 under the condition of washing once at 60° C., 1×SSC, and 0.1% SDS, and encoding a polypeptide having an activity to catalyze the reaction shown in the above-mentioned formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%.
9. A recombinant vector comprising the nucleic acid according to claim 3 .
10. A method for producing (1S,2S)-1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid, comprising bringing a treated product of a microorganism or cell having the ability to produce a hydrolase into contact with dialkyl 2-vinylcyclopropane-1,1-dicarboxylic acid, wherein the hydrolase comprises a polypeptide of the following (a), (b), (c), or (d):
(a) a polypeptide consisting of the amino acid sequence shown in SEQ ID NO: 2;
(b) a polypeptide having an amino acid sequence resulting from the deletion, insertion, substitution, and/or addition of one to 5 amino acids in the amino acid sequence shown in SEQ ID NO: 2, and an activity to catalyze the reaction shown in the formula (1)
wherein R is an alkyl group having 1-6 carbon atoms in the formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(c) a polypeptide consisting of an amino acid sequence with not less than 95% of sequence identity with the amino acid sequence shown in SEQ ID NO: 2, and an activity to catalyze the reaction shown in the above-mentioned formula (1), wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(d) a polypeptide consisting of an amino acid sequence with not less than 90% of sequence identity with the amino acid sequence shown in SEQ ID NO: 2, wherein the aforementioned amino acid sequence comprises:
(i) 5 consecutive residues DATRG corresponding to residues 75-79 of SEQ ID NO: 2;
(ii) 4 consecutive residues PYGF corresponding to residues 133-136 of SEQ ID NO: 2;
(iii) 4 consecutive residues NWPG corresponding to residues 224-227 of SEQ ID NO: 2; and/or
(iv) 5 consecutive residues PGWPG corresponding to residues 287-291 of SEQ ID NO: 2, and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%.
11. The production method according to claim 10 , wherein R in the formula (1) is an ethyl group.
12. The production method according to claim 10 , wherein the microorganism or cell is a microorganism or cell transformed with a nucleic acid comprising a base sequence of the following (e), (f), (g), or (h):
(e) the base sequence shown in SEQ ID NO: 1;
(f) a nucleic acid consisting of a base sequence resulting from the substitution, deletion, and/or addition of one to 15 bases in the base sequence shown in SEQ ID NO: 1, and encoding a polypeptide having an activity to catalyze the reaction shown in the formula (1)
wherein R is an alkyl group having 1-6 carbon atoms in the formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%;
(g) a nucleic acid consisting of a base sequence having not less than 98% of sequence identity with the base sequence shown in SEQ ID NO: 1, and encoding a polypeptide having an activity to catalyze the reaction shown in the above-mentioned formula (1);
(h) a nucleic acid having a base sequence that hybridizes with a complementary strand of the base sequence shown in SEQ ID NO: 1, under the condition of washing once at 60° C., 1×SSC, and 0.1% SDS, and encoding a polypeptide having an activity to catalyze the reaction shown in the above-mentioned formula (1), and wherein the production ratio of Syn isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid in the formula (II) to Anti isomer of the 1-alkoxycarbonyl-2-vinylcyclopropane carboxylic acid is equal to or less than 0.2%.