IP Library Granted Patent US 12,275,923
Granted Patent B2
US 12,275,923 · App. 17/199,911 · Granted Apr 15, 2025

Systems and methods for controlling attenuation in a fermentation process

Inventor: Nicholas Ketchum (Cincinnati, OH)
Assignee: Rhinegeist, LLC
C12C11/00C12C5/00C12H1/003C12Q1/18C12Q1/6895
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Quick Facts
Patent No.
US 12,275,923
App. No.
17/199,911
Granted
Apr 15, 2025
Kind
B2
Abstract

A method of controlling attenuation in a fermentation process includes culturing a fungus in a medium to produce a fermented liquid and adding a killer toxin to the fermented liquid. The killer toxin is added in an amount effective to deactivate the fungus.

Claims (18)

1. A method of controlling attenuation in a fermentation process comprising:

culturing a fungus in a medium to produce beer, wherein the fungus is at least one of Saccharomyces, Dekkera, Brettanomyce, Candida , or Aspergillus;

adding a killer toxin to the beer, wherein the killer toxin is added in an amount effective to deactivate the fungus;

conducting a first screening assay on the beer before adding the killer toxin; and

conducting a second screening assay on the beer after adding the killer toxin.

2. The method of claim 1 , wherein adding the killer toxin comprises adding the killer toxin when a desired level of attenuation has been reached.

3. The method of claim 1 , wherein adding the killer toxin comprises adding more than one type of killer toxin.

4. The method of claim 1 , wherein adding the killer toxin comprises directly adding the killer toxin to the beer.

5. The method of claim 4 , the method further comprising, before the killer toxin is added:

producing a broth by a killer yeast capable of generating the killer toxin; and

filtering the broth to provide the killer toxin.

6. The method of claim 1 , wherein adding the killer toxin comprises indirectly adding the killer toxin to the beer.

7. The method of claim 6 , wherein indirectly adding the killer toxin comprises adding viral like particles (VLPs) that contain a gene for producing the killer toxin.

8. The method of claim 7 , wherein adding the VLPs comprises adding a killer yeast to the beer, wherein the killer yeast carries the VLPs.

9. The method of claim 6 , wherein indirectly adding the killer toxin comprises adding a killer yeast capable of generating the killer toxin.

10. The method of claim 1 , wherein the first screening assay detects whether the fungus includes a genetic pathway that confers resistance to the killer toxin.

11. The method of claim 1 , wherein the second screening assay detects a presence of remaining viable fungus cells.

12. The method of claim 1 , wherein the killer toxin is at least one of K1, K2, or K28.

Assignments (1)
SECURITY INTEREST Recorded Nov 17, 2023
From: RHINEGEIST, LLC
To: FIRST FINANCIAL BANK
Reel/Frame 065598/0417 →
Continuity (3)
Provisional Application 63135147 · Jan 8, 2021
Provisional Application 62988655 · Mar 12, 2020
Related Publication 20210284939A1 · Sep 16, 2021
References Cited (47)
US 4418150A · Gunge · 1983 [cited by applicant]
US 4806472A · de Louvencourt et al. · 1989 [cited by applicant]
US 4910144A · Saito et al. · 1990 [cited by applicant]
US 5783183A · Langeveld et al. · 1998 [cited by applicant]
US 20050233032A1 · Savard et al. · 2005 [cited by applicant]
US 20180327733A1 · Denby et al. · 2018 [cited by applicant]
Akiyama et al JP-63183506-A machine translation Jul. 28, 1988 (Year: 1988). [cited by examiner]
Akiyama et al JP-63183506-A original document with Abstract (Year: 1988). [cited by examiner]
Young, “The genetic manipulation of killer character into brewing yeast,” Journal of the Institute of Brewing. Institute of Brewing (Great Britain), Sep. 1981, 87(5):292-295, Retrieved from: https://europepmc.org/articl… [cited by applicant]
Hammond et al., “Fermentation Properties of Brewing Yeast With Killer Character,” Journal of the Institute of Brewing, 90: 167-177 (1984), Retrieved from: https://onlinelibrary.wiley.com/doi/abs/10.1002/i.2050-0416.1984… [cited by applicant]
Radler et al., “Killer Toxins of Yeasts: Inhibitors of Fermentation and Their Adsorption,” J Food Prot. Mar. 1987, 50 (3):234-238, Retrieved from: https://www.ncbi.nlm.nih.gov/pubmed/30965426 (5 pages). [cited by applicant]
Atkinson, “Technical Opportunities for Malting and Brewing in the '90's,” Journal of the Institute of Brewing, 94: 261-272 (1988), Retrieved from: https://onlinelibrary.wiley.com/doi/abs/10.1002/j.2050-0416.1988.tb04583… [cited by applicant]
Ciani et al., “Killer Toxin of Kluyveromyces phaffii DBVPG 6076 as a Biopreservative Agent to Control Apiculate Wine Yeasts,” Appl Environ Microbiol. Jul. 2001; 67(7): 30583063, Retrieved from: https://www.ncbi.nlm.nih.… [cited by applicant]
Vaughan, “Enhancing the Microbiological Stability of Malt and Beer a Review,” Journal of the Institute of Brewing, 111: 355-371 (2005), Retrieved from: https://onlinelibrary.wiley.com/doi/abs/10.1002/j.2050-0416.2005.tb… [cited by applicant]
Comitini et al, “Kluyveromyces wickerhamii killer toxin: purification and activity towards Brettanomyces/Dekkera yeasts in grape must,” FEMS Microbiol Lett, Jan. 17, 2011, vol. 316, No. 1, pp. 77-82, Retrieved from http… [cited by applicant]
Oro et al., “Evaluation of damage induced by Kwkt and Pikt zymocins against Brettanomyces/Dekkera spoilage yeast, as compared to sulphur dioxide,” J Appl Microbiol, 121: 207-214 (2016), Retrieved from: https://sfamjourn… [cited by applicant]
Comitini et al, “Pichia anomala and Kluyveromyces wickerhamii killer toxins as new tools against Dekkera/Brettanomyces spoilage yeasts,” FEMS Microbiology Letters, 238: 235-240 (2004), Retrieved from: https://onlinelibr… [cited by applicant]
Yap et al, “The incidence of killer activity of non-Saccharomyces yeasts towards indigenous yeast species of grape must: potential application in wine fermentation,” Journal of Applied Microbiology, 89: 381-389 (2000), … [cited by applicant]
Zimmermann, M. et al.,(1996) “Protoplast Fusion of Yeasts,” chapter 2 of “Nonconventional Yeasts in Biotechnology,” Springer, Berlin, Heidelberg, https://doi.org/10.1007/978-3-642-79856-6_2 (17 pages). [cited by applicant]
Maule, A.P. et al.; Strains of yeast lethal to brewery yeasts; Journal of the Institute of Brewing, vol. 72, 1973; pp. 137-141. [cited by applicant]
Breinig, F. et al.; Dissecting toxin immunity in virus-infected killer yeast uncovers an intrinsic strategy of self-protection; Proceedings of the National Academy of Sciences, vol. 103, No. 10; Mar. 7, 2006; pp. 3810-3… [cited by applicant]
Eiden-Plach, A. et al., Viral Preprotoxin Signal Sequence Allows Efficient Secretion of Green Fluorescent Protein by Candida glabrata, Pichia pastoris, [cited by applicant]
El-Banna, A. A., et al.; Yeasts Producing Killer Toxins: An Overview; Alex. J. Fd. Sci. & Technol., vol. 8, No. 2; Dec. 30, 2011; pp. 41-53. [cited by applicant]
Shalsh et al., Optimization of the Protoplast Fusion Conditions of [cited by applicant]
Serviene, E. et al., Screening the Budding Yeast Genome Reveals Unique Factors Affecting K2 Toxin Susceptibility; PLoS ONE, vol. 7 No. 12; Dec. 5, 2012; pp. 1-13. [cited by applicant]
Ryan O. et al.; CRISPR-Cas9 Genome Engineering in [cited by applicant]
Pfeiffer, P., & Radler, F.; Comparison of the killer toxin of several yeasts and the purification of a toxin of type K2; Archives of Microbiology, vol. 137; 1984; pp. 357-361. [cited by applicant]
Karbalaei, M. et al., Pichia pastoris: A highly successful expression system for optimal synthesis of heterologous proteins; Journal of Cellular Physiology, vol. 235, Jan. 9, 2020; 5867-5881. [cited by applicant]
Liu, Z. et al.; Different Expression Systems for Production of Recombinant Proteins in [cited by applicant]
Schmitt, M. J. et al.; K28 , A Unique Double-Stranded RNA Killer Virus of [cited by applicant]
Emerson, J. B. et al.; Schrodinger's microbes: Tools for distinguishing the living from the dead in microbial ecosystems, Microbiome, vol. 5, No. 86; 2017; 23 pages. [cited by applicant]
Denby, C.M. et al. Industrial brewing yeast engineered for the production of primary flavor determinants in hopped peer; Natural Communications vol. 9, No. 965; 2018; 10 pages. [cited by applicant]
Maqueda, M. et al.; Characterization, Ecological Distribution, and Population Dynamics of [cited by applicant]
Maqueda, M. et al.; Wine yeast molecular typing using a simplified method for simultaneously extracting mtDNA, nuclear DNA and virus dsRNA; Food Microbiology, vol. 27; 2010; pp. 205-209. [cited by applicant]
Meier-dörnberg, T. et al.; Incidence of Saccharomyces cerevisiae var. diastaticus in the Beverage Industry: Cases of Contamination, 2008-2017; MBAA Technical Quarterly, vol. 54, No. 4; 2017; pp. 140-148. [cited by applicant]
Meier-Dörnberg, T. et al., [cited by applicant]
Melvydas, V. et al., A Novel [cited by applicant]
Meškauskas, A., & Čitavičius, D.; The K2-type killer toxin- and immunity-encoding region from [cited by applicant]
Mohamudha, P., & Ayesha, B.; Production and effect of killer toxin by [cited by applicant]
Capece, A. et al.; Conventional and non-conventional yeasts in beer production; Fermentation, vol. 4, No. 38; 2018; 11 pages. [cited by applicant]
Ramirez, M. et al.; New insights into the genome organization of yeast killer viruses based on “atypical” killer strains characterized by high-throughput sequencing, Toxins, vol. 9, No. 292; 2017; 21 pages. [cited by applicant]
Rodríguez-Cousiño, N. et al.; Relationships and Evolution of Double-Stranded RNA Totiviruses of Yeasts Inferred from Analysis of L-A-2 and L-BC Variants in Wine Yeast Strain Populations; Applied and Environmental Microb… [cited by applicant]
Schmitt, M. J. et al.; Yeast viral killer toxins: lethality and self-protection; Nature Reviews, Microbiology, vol. 4, No. 3, 212-221; Mar. 2006; pp. 212-221. [cited by applicant]
Schmitt, M. J., et al.; Viral induced yeast apoptosis, Biochimica et Biophysica Acta 1783; 2008; pp. 1413-1417. [cited by applicant]
Schmitt, M. J. et al.; Sequence of the M28 dsRNA: Preprotoxin is processed to an α/β heterodimeric protein toxin; Virology, vol. 213, No. 2; 1995; pp. 341-351. [cited by applicant]
Valsaraj, P. et al., “Biocontrol of yeast spoilage in selected food and beverages by yeast mycocin,” Research Article, Acta Biologica Indica, 2012, Assn. for the Advancement of Biodiversity Science, pp. 109-112, Manipal… [cited by applicant]
Zhong, V. et al.,(2022) “Killer Toxins for the Control of Diastatic Yeasts in Brewing,” Dept. of Biol. Sci., Univ. of Idaho, Moscow, ID; Rhinegiest Brewery, Cincinnati, OH; https://doi.org/10.1101/2022.10.17.512474 (10 … [cited by applicant]