US 6905823B2
· Kallioniemi et al.
· 2005
[cited by applicant]
US 7930104B2
· Baker et al.
· 2011
[cited by applicant]
US 7960110B2
· Bastian et al.
· 2011
[cited by applicant]
US 9090945B2
· Breen
· 2015
[cited by applicant]
US 9290814B2
· Giafis et al.
· 2016
[cited by applicant]
US 20070275403A1
· Morrison et al.
· 2007
[cited by applicant]
US 20090155805A1
· Zhang et al.
· 2009
[cited by applicant]
US 20090299640A1
· Ellis et al.
· 2009
[cited by applicant]
US 20090324596A1
· Kang et al.
· 2009
[cited by applicant]
US 20130210014A1
· Sharman
· 2013
[cited by applicant]
US 20200181719A1
· Breen
· 2020
[cited by applicant]
EP 2513340B1
· 2016
[cited by applicant]
WO WO2002077197
· 2002
[cited by applicant]
WO WO2002100246
· 2002
[cited by applicant]
WO WO2009051842
· 2009
[cited by applicant]
WO WO2012078053
· 2012
[cited by applicant]
WO WO2012135125
· 2012
[cited by applicant]
WO WO2017210115
· 2017
[cited by applicant]
Thomas et al. (J. of Heredity, Am. Genetic Association, vol. 98, No. 5, pp. 474-484, 2007). (Year: 2007).
[cited by examiner]
Hedan et al. (BMC Cancer, vol. 11, pp. 1-14, May 26, 2011). (Year: 2011).
[cited by examiner]
Milne et al. (Chromosome Research, vol. 12, pp. 825-835, 2004). (Year: 2004).
[cited by examiner]
Jark et al. (Research in Veterinary Science, vol. 111, pp. 26-30, Epublished Nov. 17, 2016). (Year: 2016).
[cited by examiner]
Mochizuki et al. (Chromosome Res vol. 25, pp. 129-143, published online Jan. 5, 2017). (Year: 2017).
[cited by examiner]
Al Mulla et al., “Genetic profiling of stage I and II colorectal cancer may predict metastatic relapse,” Modern Pathology. vol. 19, No. 5 pp. 648-658 (2006).
[cited by applicant]
Angstadt et al., “Characterization of canine osteosarcoma by array comparative genomic hybridization and RT-qPCR: signature of genomic imbalance in canine osteosarcoma parallel the human counterpart.” Genes Chromosomes …
[cited by applicant]
Angstadt, Andrea Y. et al.; “A genome-wide approach to comparative oncology: high-resolution oligonucleotide aCGH of canine and human osteosarcoma pinpoints shared microaberrations,” Cancer Genetics, 2012.
[cited by applicant]
Arendt et al., “Genome-Wide Association Study of Golden Retrievers Identifies Germ-Line Risk Factors Predisposing to Mast Cell Tumours.” PLoS Genet, vol. 11, Article ID e1005647 (2015).
[cited by applicant]
Bowman et al. (Molecular Evaluation of Canine Urothelial Carcinoma and the Cell line Model, NCSU CVM Annual Research Forum Award of Excellence for Poster presentation, Feb. 2013). (Year: 2013).
[cited by applicant]
Breen et al. “An integrated 4249 marker FISH/RH map of the canine genome.” BMC Genomics 5(1):65 (2004).
[cited by applicant]
Breen et al. “Chromosome-Specific Single-Locus FISH Probes Allow Anchorage of an 1800-Marker Integrated Radiation-Hybrid/Linkage Map of the Domestic Dog Genome to All Chromosomes”, Genome Research, 11:784-1795 (2001).
[cited by applicant]
Breen, “Update on genomics in veterinary oncology.” Top Companion Anim Med, vol. 24, pp. 113-121 (2009).
[cited by applicant]
Breen, M., “Evolutionarily conserved cytogenetic changes in hematological malignancies of dogs and humans—man and his best friend share more than companionship,” vol. 16, No. 1, pp. 145-154 (Feb. 25, 2008).
[cited by applicant]
Brown, Subtelomeric chromosome rearrangements are detected using an innovative 12-color FISH assay (M-TEL), Nature Medicine, vol. 7, No. 4, pp. 497-501 (2001).
[cited by applicant]
Choi, et al., “Color Compensation of Multicolor FISH Images”, IEEE Transactions on Medical Imaging, vol. 28, No. 1, pp. 129-136 (2009).
[cited by applicant]
Decision to grant a European patent pursuant to Article 97(1) EPC for European Patent Application No. 10861217.7 dated Jun. 2, 2016.
[cited by applicant]
Decision to Grant corresponding to European U.S. Appl. No. 14/861,374 dated Dec. 10, 2020.
[cited by applicant]
European Search Report corresponding to European Patent Application No. 10861217.7-1403/2513340 dated Jun. 3, 2013.
[cited by applicant]
European Search Report corresponding to European Patent Application No. 17807289.8 dated Jan. 10, 2020.
[cited by applicant]
Extended European Search Report issued in counterpart European Application No. 14861374.8 dated May 29, 2017 eleven (11) pages).
[cited by applicant]
Giantin et al., “Global gene expression analysis of canine cutaneous mast cell tumor: could molecular profiling be useful for subtype classification and prognostication?” PLoS One, vol. 9, Article ID e95481 (2014).
[cited by applicant]
Haenisch et al., “Systemic mast cell activation disease: the role of molecular genetic alterations in pathogenesis heritability and diagnostics.” Immunology, vol. 137, pp. 197-205 (2012).
[cited by applicant]
Hahn et al., “Diagnostic and Prognostic Importance of Chromosomal Aberrations Identified in 61 Dogs with Lymphosarcoma,” Veterinary Pathology, vol. 31, No. 5, pp. 528-540 (Sep. 1, 1994).
[cited by applicant]
Hedan et al. (2011) Molecular cytogenetic characterization of canine histiocytic sarcoma: A spontaneous model for human histiocytic cancer identifies deletion of tumor suppressor genes and highlights influence of geneti…
[cited by applicant]
Intention to Grant corresponding to European Patent Application No. 14861374.8 dated Jan. 7, 2020.
[cited by applicant]
International Preliminary Report dated Feb. 2, 2017 from related International Application No. PCT/US2015/41988.
[cited by applicant]
International Preliminary Report on Patentability for related PCT Application No. PCT/US2014/065773 dated May 17, 2016.
[cited by applicant]
International search report and the written opinion of the international searching authority for a related PCT Application No. PCT/US2014/065773 dated May 21, 2015.
[cited by applicant]
International Search Report and Written Opinion dated Jul. 2, 2015 from related International Application No. PCT/US2015/025916.
[cited by applicant]
International Search Report and Written Opinion dated Oct. 30, 2015 from related International Application No. PCT/US2015/41988.
[cited by applicant]
International Search Report and Written Opinion issued in PCT Application No. PCT/US2017/034711 dated Sep. 14, 2017 (six (6) pages).
[cited by applicant]
Johnson et al., “Chemotherapy for Dogs with Mast Cell Tumors Approved by the FDA,” Advances in Small Animal Medicine and Surgery, vol. 23., No. 1 (2010).
[cited by applicant]
Karlin-Neumann al. (2012). Probing copy number variations using Bio-Rad's QX100™ Droplet Digital™ PCR system. Bio-Rad Bulletin 6277.
[cited by applicant]
Kennedy et al., “Genome-wide DNA copy number analysis and targeted transcriptional analysis of canine histiocytic malignancies identifies diagnostic signatures and highlights disruptions of spindle assembly complex,” Ch…
[cited by applicant]
Koenig, A.; “Expression and Significance of p53, Rb, p21/waf-1, p16/ink-4a, and PTEN Tumor Suppressors in Canine Melanoma,” Vet Pathol. 39: 458-472 (2002).
[cited by applicant]
Letard et al.,(2008) “Gain-of-function mutations in the extracellular domain of KIT are common in canine mast cell tumors.” Mol Cancer Res, vol. 6, pp. 10 Pages.
[cited by applicant]
Lin et al., “Generation and characterization of novel canine malignant mast cell line CL1.” Vet Immunol Immunopathol, vol. 127, pp. 114-124 (2009).
[cited by applicant]
Lin Tzu-Yin et al., “Targeting canine bladder transitional cell carcinoma with a human bladder cancer-specific ligand”, Molecular Cancer, Biomed Central, London, GB, vol. 10, No. 1, Jan. 27, 2011 ( Jan. 27, 2011), age 9…
[cited by applicant]
Magdy Sayed Aly et al: “Chromosomal aberrations in early-stage bilharzia! bladder cancer”, Cancer Genetics and Cytogenetics., vol. 132, No. 1, Jan. 1, 2002 (Jan. 1, 2002), pp. 41-45, XP055372968, us SSN: 0165-4608, DOI:…
[cited by applicant]
Maria I. Stamouli et al: “Detection of genetic alterations in primary bladder carcinoma with dual-color and multiplex ftuorescence in situ hybridization”, Cancer Genetics and Cytogenetics., vol. 149, No. 2, Mar. 1, 004 …
[cited by applicant]
Marin-Aguilera Mercedes et al: “Utility of Fluorescence in Situ Hybridization as a Non-invasive Technique in he Diagnosis of Upper Urinary Tract Urothelial Carcinoma”, European Urology, vol. 51, No. 2, Aug. 22, 2006Aug.…
[cited by applicant]
Milne et al., “Karyotype of canine soft tissue sarcomas: a multi-colour, multi-species approach to canine chromosome painting”, Chromosome Research, vol. 12 pp. 825-835 (2004).
[cited by applicant]
Mochizuki et al., “Detection of Copy Number Imbalance in Canine Urothelial Carcinoma With Droplet Digital Polymerase Chain Reaction.” Vet Pathol, vol. Nov. 2015 (2015).
[cited by applicant]
Modiano et al., “Predictive value of p16 or Rb inactivation in a model of naturally occurring canine non-Hodgkin's lymphoma,” Leukemia. vol. 21, No. 1 pp. 184-187 (2007).
[cited by applicant]
Muller et al. (2012) Genetic characterization via array based comparative genomic hybridization. Tierarztliche Praxis. 40(1):55-58.
[cited by applicant]
Mullins et al. “Agreement in Breast Cancer Classification between Microarray and Quantitative Reverse Transcription PCR from Fresh-Frozen and Formalin-Fixed, Paraffin-Embedded Tissues” Clin Chem. 53(7): 1273-1279 (2007).
[cited by applicant]
Notice of Acceptance corresponding to Australian Patent Application No. 2014348428 dated Dec. 7, 2020.
[cited by applicant]
Notice of Allowability corresponding to U.S. Appl. No. 15/037,438 dated Jul. 31, 2019.
[cited by applicant]
Notice of Allowance corresponding to Canadian Patent Application No. 2,785,999 dated Nov. 10, 2020.
[cited by applicant]
Notice of Allowance corresponding to Japanese Patent Application No. 2016-554527 dated Feb. 5, 2019.
[cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 15/037,438 dated Jun. 7, 2019.
[cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 15/328,733 dated Jul. 16, 2019.
[cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 15/304,388 dated Jul. 24, 2019.
[cited by applicant]
Notice of Publication corresponding to U.S. Appl. No. 16/659,095 dated Apr. 9, 2020.
[cited by applicant]
Notice of Publication corresponding to U.S. Appl. No. 16/707,745 dated Jun. 11, 2020.
[cited by applicant]
Notice of Publication corresponding to U.S. Appl. No. 16/725,195 dated Jul. 31, 2020.
[cited by applicant]
Notice of Publication Corresponding to U.S. Appl. No. 17/216,170 dated Aug. 6, 2021.
[cited by applicant]
Notification Concerning Transmittal of International Preliminary Report on Patentability (Chapter I of the Patent Cooperation Treaty) corresponding to International Patent Application No. PCT/US2010/060292 dated Aug. 30…
[cited by applicant]
Notification of Transmittal of the International Search Report and the Written Opinion of the International Searching Authority, or the Declaration corresponding to International Patent Application No. PCT/US2010/060292…
[cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 15/328,733 dated Apr. 27, 2018.
[cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 15/328,733 dated Feb. 15, 2019.
[cited by applicant]
Office Action corresponding to Canadian Patent Application No. 2,785,999 dated Aug. 16, 2016.
[cited by applicant]
Office Action corresponding to Japanese Patent Application No. 2016-554527 dated Sep. 25, 2018. (Translation).
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 13/515,614 dated Jul. 30, 2014.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 15/037,438 dated Aug. 15, 2017.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 15/037,438 dated May 23, 2018.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 15/037,438 dated Jan. 8, 2019.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 15/037,438 dated Nov. 24, 2017.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/725,195 dated Apr. 5, 2022.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/707,745 dated May 2, 2022.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/659,095 dated Aug. 11, 2022.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/725,195 date Nov. 7, 2022.
[cited by applicant]
Office Action corresponding with European Patent Application No. 10861217.7-1403 dated Apr. 25, 2014.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/707,745 dated Dec. 3, 2021.
[cited by applicant]
Office Action corresponding with European Patent Application No. 14861374.8-1118 dated Apr. 4, 2019.
[cited by applicant]
Oral Summons corresponding with European Patent Application No. 10861217.7-1403 dated Jun. 12, 2015.
[cited by applicant]
Ratcliffe et al., “Proteomic identification and profiling of canine lymphoma patients,” Veterinary and Comparative Oncology. vol. 7, No. 2 pp. 92-105 (2009).
[cited by applicant]
Roode et al., “Genome-wide assessment of recurrent genomic imbalances in canine leukemia identifies evolutionarily conserved regions for subtype differentiations,” Chromosome Research, Kluwer Academic Publishers, vol. 2…
[cited by applicant]
Roode, Sarah Culvar.; “Molecular Characterization of Canine Leukemia—Comparative Value and Clinical Applications,” A dissertation submitted to the Graduate Faculty of North Carolina State University in partial fulfillme…
[cited by applicant]
Sailasuta, A. et al. “The Relevance of CD117-Immunocythochemistry Staining Patterns to Mutational Exon-11 in c-kit Detected by PCR from Fine-Needle Aspirated Canine Mast Cell Tumor Cells” Veterinary Medicine Internation…
[cited by applicant]
Seiser et al. “Reading between the lines: molecular characterization of five widely used canine lymphoid tumour cell lines.” Veterinary and comparative oncology 11(1): 30-50 (2013).
[cited by applicant]
Sotirakopolous et al.: “Evaluation of Microsatellite Instability in Urine for the Diagnosis of Transitional Cell Carcinoma of the Lower Urinary Tract in Dogs”, J Vet Med, 24: 1445-1451 (2010).
[cited by applicant]
Supplementary material for Thomas R, et al.; “Refining tumor-associated aneuploidy through ‘genomic recoding’ of recurrent DNA copy number aberrations in 150 canine non-Hodgkin lymphomas,” Leukemia & Lymphoma, 2011.
[cited by applicant]
Thomas et al. (2009) “Influence of genetic background on tumor karyotypes: evidence for breed-associated cytogenetic aberrations in canine appendicular osteosarcoma,” Chromosome Research, vol. 10, 20 Pages.
[cited by applicant]
Thomas et al., “A canine cancer-gene microarray for CGH analysis of tumors,” Cytogenetic and Genome Research, vol. 102, No. 1-4, pp. 254-260 (2003).
[cited by applicant]
Thomas et al., “A Cytogenetically Characterized, Genome-Anchored 10-M b BAC Set and CGH Array for the Domestic Dog”, Journal of Heredity., vol. 98, No. 5, Jul. 23, 2007 (Jul. 23, 2007), pp. 474-484, XP055343142,3B ISSN:…
[cited by applicant]
Thomas et al., “Chromosome aberrations in canine multicentric lymphomas detected with comparative genomic hybridisation and a panel of single locus probes,” British Journal of Cancer. vol. 89, No. 8 pp. 1530-1537 (2003).
[cited by applicant]
Thomas, Chromosome Res, vol. 22, No. 3, pp. 305-319, 2017 (Year: 2014).
[cited by applicant]
Thomas, R., et al. “A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis.” Cytogenetic and genome research 122(2): 110-121 (2008).
[cited by applicant]
Thomas, Rachael et al., “Construction of a 2-Mb resolution BAG microarray for CGH analysis of canine tumors,” Genome Research, pp. 1832-1837, Dated Feb. 13, 2005, Revised May 4, 2005.
[cited by applicant]
Urovysion Bladder Cancer Kit; < http://www.abbottmolecular.com> Accessed Nov. 11, 2013.
[cited by applicant]
Urovysion Bladder Cancer Kit; Package Insert; Abbott Laboratories, 2006.
[cited by applicant]
Winkler et al. (2006) Polysomy 13 in a canine prostate carcinoma underlining its significance in the development of prostate cancer. Cancer Genet. Cytogenet. 169:154-158.
[cited by applicant]
Letard S. et al. “Gain-of-Function Mutations in the Extracellular Domain of KIT Are Common in Canine Mast Cell Tumors” Molecular Cancer Research. 2008 pp. 1137-1145 {ten (10) pages).
[cited by applicant]
Lin et al. (Veterinary Immunology and Immunopathology, vol. 127, pp. 114-124, 2009) (Year: 2009).
[cited by applicant]
Mochizuki, A. et al. “Detection of Copy Number Imbalance in Canine Urothelial Carcinoma With Droplet Digital Polymerase Chain Reaction” Oncology-Original Article. Veterinary Pathology_ 2016, vol. 53(4) pp. 764-772 (nine…
[cited by applicant]
Notice of Acceptance corresponding to Australian Patent Application No. 2014348248 dated Dec. 7, 2020.
[cited by applicant]
Notice of Allowance corresponding to Canadian Patent Application No. 2,785,999 dated Dec. 8, 2020.
[cited by applicant]
Thomas et al. (Chromosome Research, vol. 10, Apr. 1, 2009 (Year: 2009).
[cited by applicant]
Thomas, Rachael, et al. “Refining tumor-associated aneuploidy through ‘genomic receding’ of recurrent DNA copy umber aberrations in 150 canine non-Hodgkin lymphomas.” Leukemia & lymphoma 52(7): 1321-1335 (2011).
[cited by applicant]
Intention to Grant (2nd) corresponding to European Patent Application No. 14861374.8 dated Jun. 18, 2020.
[cited by applicant]
Intention to Grant corresponding to European Patent Application No. 17807289.8 dated Jan. 7, 2020.
[cited by applicant]
Mutsaers, A.J., W.R. Widmer, and D.W. Knapp, Canine transitional cell carcinoma. J Vet Intern Med, 2003. 17(2): p. 136-44.
[cited by applicant]
Notice of Allowance corresponding to U.S. Appl. No. 16/305,315 dated Nov. 18, 2020.
[cited by applicant]
Office Action (Restriction Requirement) corresponding to U.S. Appl. No. 16/305,315 dated Jun. 15, 2020.
[cited by applicant]
Office Action corresponding to Canadian Patent Application No. 3,025,776 dated Mar. 31, 2023.
[cited by applicant]
Office Action and Interview Summary corresponding to U.S. Appl. No. 16/659,095 dated Apr. 28, 2023.
[cited by applicant]
Office Action corresponding to U.S. Appl. No. 16/725,195 dated Jan. 23, 2024.
[cited by applicant]
Office Action and Interview Summary corresponding to U.S. Appl. No. 16/659,095 dated May 24, 2024.
[cited by applicant]
Supplemental Notice of Allowability corresponding to U.S. Appl. No. 16/305,315 dated Dec. 31, 2020.
[cited by applicant]