IP Library Granted Patent US 12,312,354
Granted Patent B2
US 12,312,354 · App. 17/619,688 · Granted May 27, 2025

Selective BTK irreversible inhibitors

Inventors: Jeffrey L. Gustafson (San Diego, CA); Sean Thomas Toenjes (San Diego, CA); Samuel T. Albright (San Diego, CA); Ramsey Hazin (San Diego, CA)
Assignee: SAN DIEGO STATE UNIVERSITY (SDSU) FOUNDATION
C07D487/04A61P35/00
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Quick Facts
Patent No.
US 12,312,354
App. No.
17/619,688
Granted
May 27, 2025
Kind
B2
Abstract

The invention provides a series of conformationally stable and selective, irreversible kinase inhibitors, and methods of using the kinase inhibitors. The effect of atropisomerism on kinase selectivity was assessed, finding improved selectivity compared to rapidly interconverting parent compounds. The compounds herein are atropisomers having increased kinase selectivity and are for use in treating conditions that benefit from selective BTK kinase inhibition.

Claims (40)

1. An atropisomer compound of Formula I:

or salt thereof;

wherein

G 1 is aryloxy, halo, hydroxy, alkyl, alkoxy, amino, amido, or phenyl;

G 2 is amino, halo, hydroxy, alkyl, alkoxy, arylnoxy, amido, or phenyl;

G 3 and G 4 are independently H, halo, hydroxy, alkyl, alkoxy, or amino;

Q is C or N;

X and Y taken together form an atropisomerism rotational blocking moiety; and

R 1 is a buttressing substituent wherein the buttressing substituent comprises a ring heteroatom and an electrophile;

wherein the atropisomer is atropisomerically stable; and

wherein the selectivity of the atropisomer is modulated compared to a corresponding rapidly interconverting parent kinase inhibitor, wherein the atropisomerism rotational blocking moiety of the atropisomer in combination with the buttressing substituent produces a barrier to rotation of at least 10 kcal/mol, and the atropisomeric purity of the atropisomer has a half-life of at least 8 hours, thereby stabilizing atropisomerism of the atropisomer having modulated kinase selectivity.

2. The compound of claim 1 wherein R 1 is a nitrogen heterocycle wherein the nitrogen heterocycle is substituted with a Michael acceptor.

3. The compound of claim 2 wherein R 1 is:

wherein R 2 is H, halo, nitro, or —(C 1 -C 6 )alkyl.

4. The compound of claim 1 wherein X is —(C 1 -C 6 )alkyl, halo, hydroxy, —O(C 1 -C 6 )alkyl, or amino.

5. The compound of claim 1 wherein Q is C and Y is —(C 1 -C 6 )alkyl, halo, hydroxy, —O(C 1 -C 6 )alkyl, or amino, wherein —(C 1 -C 6 )alkyl is optionally substituted;

or Q is N and Y is lone pair.

6. The compound of claim 1 wherein G 1 is OPh, or —(C═O)NR a heteroaryl wherein R a is H or —(C 1 -C 6 )alkyl.

7. The compound of claim 1 wherein G 2 is NH 2 .

8. The compound of claim 1 wherein G 3 is H and G 4 is H, F, or CH 3 .

9. The compound of claim 1 wherein the compound is an atropisomer having an (R a )-configuration in reference to the bond joining the phenyl moiety to the 5-membered heterocyclic ring of Formula I.

10. The compound of claim 1 wherein the compound is an atropisomer having an (S a )-configuration in reference to the bond joining the phenyl moiety to the 5-membered heterocyclic ring of Formula I.

11. The compound of claim 1 wherein the compound of Formula I is a compound of Formula II, Formula IIB, or Formula V:

or salt thereof;

wherein

G 1 is aryloxy or amido;

G 4 is H, halo, hydroxy, alkyl, alkoxy, or amino;

R 1 is:

wherein R 2 is H, halo, nitro, or —(C 1 -C 6 )alkyl;

X is halo alkyl, alkoxy, or amino;

Y is halo alkyl, alkoxy, or amino; and

Z is acyl.

12. The compound of claim 11 wherein X and Y are CH 3 .

13. The compound of claim 11 wherein G 1 is OPh or —(C═O)NHpyridyl.

14. The compound of claim 11 wherein Z is:

15. The compound of claim 11 wherein the compound is:

or salt thereof.

16. A pharmaceutical composition comprising the compound of claim 1 in combination with a pharmaceutically acceptable diluent, carrier, or excipient.

17. A method for the treatment of blood cancer in a subject in need thereof comprising administering an effective amount of an atropisomer of claim 1 , thereby treating the cancer.

18. The method of claim 17 wherein the atropisomer is selective for BTK kinase over other kinases.

Assignments (2)
CONFIRMATORY LICENSE Recorded Aug 2, 2023
From: SAN DIEGO STATE UNIVERSITY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 064470/0831 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 15, 2022
From: GUSTAFSON, JEFFREY; TOENJES, SEAN; ALBRIGHT, SAMUEL; HAZIN, RAMSEY
To: SAN DIEGO STATE UNIVERSITY (SDSU) FOUNDATION
Reel/Frame 059611/0488 →
Continuity (2)
Provisional Application 62866507 · Jun 25, 2019
Related Publication 20220306638A1 · Sep 29, 2022
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