Compositions and methods for organ-protective expression and modulation of coding ribonucleic acids
Compositions are provided comprising messenger RNA constructs having at least one open reading frame (ORF), wherein the ORF is operatively linked to at least one untranslated region (UTR), wherein the UTR comprises at least one organ protection sequence (OPS), wherein the OPS sequence comprises at least a first, a second and a third micro-RNA (miRNA) target sequence, and wherein each of the at least a first, second and third the miRNA target sequences are optimised to hybridise with a corresponding miRNA sequence. The compositions and molecules provided are useful in therapies such as for the treatment of cancer, in immunotherapies, and in vaccines.
1. A composition comprising:
at least a first mRNA construct comprising at least a first open reading frame (ORF), wherein the ORF is operatively linked to at least one untranslated region (UTR), wherein the UTR comprises at least a first, second, and a third micro-RNA (miRNA) target sequence, and wherein each of the at least first, second, and third miRNA target sequences are optimised to each hybridise with a different corresponding miRNA sequence; further comprising at least a second mRNA construct comprising at least a second open reading frame (ORF), wherein the second ORF encodes a proinflammatory cytokine selected from the group consisting of: IL-1; IL-2; IL-3; IL-4; IL-5; IL-6; IL-7; IL-8; IL-9; IL-10; IL-11; IL-12; IL-15; IL-17; IL-21; TGF-beta; IFNγ; IFNα; IFNβ; TNFα; M-CSF; G-CSF; and GM-CSF,
wherein the first ORF encodes an antigen selected from: a bacterial protein and/or a viral protein; and
an in vivo delivery composition;
wherein the first and second mRNA constructs are comprised within or adsorbed to the delivery composition.
2. The composition of claim 1 comprising:
an open reading frame (ORF) encoding an antigen comprising all or part of a coronavirus protein.
3. The composition of claim 2 , wherein the coronavirus protein is selected from a coronavirus spike, envelope, membrane, or nucleocapsid protein.
4. The composition of claim 3 , wherein the coronavirus protein is a SARS-CoV-2 spike protein.
5. The composition of claim 4 , wherein the ORF encodes the Receptor Binding Domain of a SARS-CoV-2 spike protein.
6. The composition of claim 1 , wherein the delivery composition is selected from the group consisting of a particle, a polymeric particle; a liposome; a lipidoid particle; and a viral vector.
7. The composition of claim 1 , wherein the delivery composition comprises a lipid, phospholipid, cholesterol and a polyethylene glycol (PEG).
8. The composition of claim 1 , wherein the second ORF codes for a cytokine selected from the group consisting of: IL-7; IL-15; IL-17; and IL-21.
9. The composition of claim 1 , wherein the at least a first and second miRNA target sequences include one or more sequences that bind with an miRNA selected from the group consisting of miRNA-122; miRNA-125; miRNA-199; miRNA-124a; miRNA-126; Let7 miRNA family; miRNA-375; miRNA-141; miRNA-142; miRNA-148a/b; miRNA-143; miRNA-145; miRNA-194; miRNA-200c; miRNA-203a; miRNA-205; miRNA-1; miRNA-133a; miRNA-206; miRNA-34a; miRNA-192; miRNA-194; miRNA-204; miRNA-215; miRNA-30 a,b,c; miRNA-877; miRNA-4300; miRNA-4720; and miRNA-6761.
10. The composition of claim 1 , wherein the at least a first and second miRNA target sequences are selected from one or more of the sequences of SEQ ID NOs: 44-57.
11. A method of stimulating an immune response in a subject comprising administering to the subject in need thereof an effective amount of a composition according to claim 1 .
12. The method of claim 11 , wherein the composition is administered orally, intravenously, topically, intratumorally, intralesionally, subcutaneously, intra-muscularly, intranasally, intrathecally, intra-arterially and/or through inhalation.
13. The composition of claim 1 , wherein the second ORF codes for an IL-12 protein, or a derivative, agonist or homologue thereof.
14. The composition of claim 1 , wherein the first mRNA further comprises at least a second open reading frame (ORF), wherein the second ORF encodes a proinflammatory cytokine selected from the group consisting of: IL-1; IL-2; IL-3; IL-4; IL-5; IL-6; IL-7; IL-8; IL-9; IL-10; IL-11; IL-12; IL-15; IL-17; IL-21; TGF-beta; IFNγ; IFNα; IFNβ; TNFα; M-CSF; G-CSF; and GM-CSF.
15. The composition of claim 14 , wherein the second ORF codes for a cytokine selected from the group consisting of: IL-7; IL-15; IL-17; or IL-21.
16. The composition of claim 1 , wherein the second ORF is operatively linked to at least one untranslated region (UTR), wherein the UTR comprises at least a fourth, a fifth and a sixth miRNA target sequence, and wherein each of the at least a fourth, fifth and sixth miRNA target sequences are optimised to each hybridise with a different corresponding miRNA sequence.
17. The composition of claim 16 , wherein the at least a fourth, fifth and sixth miRNA target sequences include one or more sequences that bind with an miRNA selected from the group consisting of miRNA-122; miRNA-125; miRNA-199; miRNA-124a; miRNA-126; Let7 miRNA family; miRNA-375; miRNA-141; miRNA-142; miRNA-148a/b; miRNA-143; miRNA-145; miRNA-194; miRNA-200c; miRNA-203a; miRNA-205; miRNA-1; miRNA-133a; miRNA-206; miRNA-34a; miRNA-192; miRNA-194; miRNA-204; miRNA-215; miRNA-30 a,b,c; miRNA-877; miRNA-4300; miRNA-4720; and miRNA-6761.
18. The composition of claim 17 , wherein the at least a fourth, fifth and sixth miRNA target sequences are selected from one or more of the sequences of SEQ ID NOs: 44-57.