IP Library Granted Patent US 12,338,249
Granted Patent B2
US 12,338,249 · App. 17/716,963 · Granted Jun 24, 2025

Crystalline forms of N-(4-(1-(2,6-difluorobenzyl)-5-((dimethylamino)methyl)-3-(6-methoxy-3-pyridazinyl)-2,4-dioxo-1,2,3,4-tetrahydrothieno[2,3-d]pyrimidin-6-yl)phenyl)-N′-methoxyurea

Inventors: Michael Thomas Brandl (Redwood City, CA); Patricia Andres (Bend, OR); Petinka I. Vlahova (West Lafayette, IN); Tsuyoshi Sasaki (Osaka, JP)
Assignees: Sumitomo Pharma Switzerland GmbH; Takeda Pharmaceutical Company Limited
C07D495/04C07B2200/13
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Quick Facts
Patent No.
US 12,338,249
App. No.
17/716,963
Granted
Jun 24, 2025
Kind
B2
Abstract

This disclosure relates to novel crystalline forms of N-(4-(1-(2,6-difluorobenzyl)-5-((dimethylamino)methyl)-3-(6-methoxy-3-pyridazinyl)-2,4-dioxo-1,2,3,4-tetrahydrothieno[2,3-d]pyrimidin-6-yl)phenyl)-N′-methoxyurea. It also relates to methods of making the disclosed crystalline forms, pharmaceutical compositions and kits comprising them, and methods of treatment and uses comprising their administration.

Claims (20)

1. A crystalline form of an isopropyl alcohol solvate of N-(4-(1-(2,6-difluorobenzyl)-5-((dimethylamino)methyl)-3-(6-methoxy-3-pyridazinyl)-2,4-dioxo-1,2,3,4-tetrahydrothieno[2,3-d]pyrimidin-6-yl)phenyl)-N′-methoxyurea.

2. The crystalline form of claim 1 , characterized by an X-ray powder diffraction pattern comprising at least three 2-theta (2θ+0.2° 2θ) peaks selected from 8.4°, 10.6°, 13.6°, 15.4° and 18.8°.

3. The crystalline form of claim 1 , characterized by an X-ray powder diffraction pattern comprising 2-theta (2θ+0.2° 2θ) peaks at 8.4°, 10.6°, 13.6°, 15.4° and 18.8°.

4. The crystalline form of claim 1 , characterized by an X-ray powder diffraction pattern substantially the same as the pattern shown in FIG. 13 .

5. The crystalline form of claim 1 , characterized by a thermogravimetric (TG) thermogram substantially the same as the pattern shown in FIG. 14 .

6. The crystalline form of claim 1 , characterized by a differential scanning calorimetry (DSC) thermogram comprising an endothermic peak at about 147° C.

7. The crystalline form of claim 1 , characterized by a DSC thermogram substantially the same as the pattern shown in FIG. 15 .

8. A crystalline form of a dimethylformamide solvate of N-(4-(1-(2,6-difluorobenzyl)-5-((dimethylamino)methyl)-3-(6-methoxy-3-pyridazinyl)-2,4-dioxo-1,2,3,4-tetrahydrothieno[2,3-d]pyrimidin-6-yl)phenyl)-N′-methoxyurea that exhibits an X-ray powder diffraction pattern comprising at least three 2-theta (2θ+0.2° 2θ) peaks selected from 7.0°, 10.3°, 10.5°, 13.0°, 18.4° and 20.8°.

9. The crystalline form of claim 8 , wherein the X-ray powder diffraction pattern comprises at least five 2-theta (2θ+0.2° 2θ) peaks selected from 7.0°, 10.3°, 10.5°, 13.0°, 18.4° and 20.8°.

10. The crystalline form of claim 8 , characterized by an X-ray powder diffraction pattern substantially the same as the pattern shown in FIG. 30 .

11. The crystalline form of claim 8 , characterized by a TG thermogram substantially the same as the pattern shown in FIG. 31 , top panel.

12. The crystalline form of claim 8 , characterized by a DSC thermogram comprising an endothermic peak at about 178° C.

13. The crystalline form of claim 8 , characterized by a DSC thermogram substantially the same as the pattern shown in FIG. 31 , bottom panel.

14. A crystalline form of an acetone solvate of N-(4-(1-(2,6-difluorobenzyl)-5-((dimethylamino)methyl)-3-(6-methoxy-3-pyridazinyl)-2,4-dioxo-1,2,3,4-tetrahydrothieno[2,3-d]pyrimidin-6-yl)phenyl)-N′-methoxyurea.

15. The crystalline form of claim 14 , characterized by an X-ray powder diffraction pattern comprising at least three 2-theta (2θ+0.2° 2θ) peaks selected from 10.3°, 10.6°, 11.1°, 13.0°, 15.7°, 18.4°, 19.1°, 20.3° and 20.7°.

16. The crystalline form of claim 14 , characterized by an X-ray powder diffraction pattern comprising at least five 2-theta (2θ+0.2° 2θ) peaks selected from 10.3°, 10.6°, 11.1°, 13.0°, 15.7°, 18.4°, 19.1°, 20.3° and 20.7°.

17. The crystalline form of claim 14 , characterized by an X-ray powder diffraction pattern substantially the same as the pattern shown in FIG. 32 .

18. The crystalline form of claim 14 , characterized by a TG thermogram substantially the same as the pattern shown in FIG. 33 , top panel.

19. The crystalline form of claim 14 , characterized by a DSC thermogram comprising an endothermic peak at about 189° C.

20. The crystalline form of claim 14 , characterized by a DSC thermogram substantially the same as the pattern shown in FIG. 33 , bottom panel.

Assignments (9)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 8, 2025
From: SUMITOMO PHARMA SWITZERLAND GMBH
To: SUMITOMO PHARMA CO., LTD.
Reel/Frame 071971/0600 →
CHANGE OF NAME Recorded Sep 19, 2023
From: MYOVANT SCIENCES GMBH
To: SUMITOMO PHARMA SWITZERLAND GMBH
Reel/Frame 064954/0062 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 30, 2022
From: SASAKI, TSUYOSHI
To: TAKEDA PHARMACEUTICAL COMPANY LIMITED
Reel/Frame 060937/0079 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: SAKAGUCHI, TOMOHIKO
To: KATAYAMA SEIYAKUSYO CO., LTD.
Reel/Frame 059601/0717 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: KATAYAMA SEIYAKUSYO CO., LTD.
To: TAKEDA PHARMACEUTICAL COMPANY LIMITED
Reel/Frame 059601/0744 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: MYOVANT SCIENCES, INC.
To: MYOVANT SCIENCES GMBH
Reel/Frame 059601/0575 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: AMRI SSCI, LLC
To: MYOVANT SCIENCES, INC.
Reel/Frame 059717/0420 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: BRANDL, MICHAEL THOMAS
To: MYOVANT SCIENCES, INC.
Reel/Frame 059601/0228 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 14, 2022
From: ANDRES, PATRICIA; VLAHOVA, PETINKA I.
To: AMRI SSCI, LLC
Reel/Frame 059715/0130 →
Continuity (3)
Continuation PCTEP2020078493 · Oct 9, 2020
Provisional Application 62913560 · Oct 10, 2019
Related Publication 20220396582A1 · Dec 15, 2022
References Cited (156)
US 3872115A · Sugimoto et al. · 1975 [cited by applicant]
US 5312958A · Suenaga et al. · 1994 [cited by applicant]
US 6297379B1 · Furuya et al. · 2001 [cited by applicant]
US 6340686B1 · Furuya et al. · 2002 [cited by applicant]
US 7300935B2 · Cho et al. · 2007 [cited by applicant]
US 7569570B2 · Furuya et al. · 2009 [cited by applicant]
US 8058280B2 · Cho et al. · 2011 [cited by applicant]
US 8735401B2 · Cho et al. · 2014 [cited by applicant]
US 9346822B2 · Cho et al. · 2016 [cited by applicant]
US 9758528B2 · Fukuoka et al. · 2017 [cited by applicant]
US 10150778B2 · Miwa · 2018 [cited by applicant]
US 10160765B2 · Enlow et al. · 2018 [cited by applicant]
US 10350170B2 · Yamane et al. · 2019 [cited by applicant]
US 10449191B2 · Rajasekhar et al. · 2019 [cited by applicant]
US 10464945B2 · Miwa · 2019 [cited by applicant]
US 10544160B2 · Miwa · 2020 [cited by applicant]
US 10689359B2 · Shu et al. · 2020 [cited by applicant]
US 10786501B2 · Rajasekhar et al. · 2020 [cited by applicant]
US 11033551B2 · Johnson et al. · 2021 [cited by applicant]
US 11053257B2 · Miwa · 2021 [cited by applicant]
US 11583526B2 · Rajasekhar et al. · 2023 [cited by applicant]
US 11655256B1 · Paschalides · 2023 [cited by applicant]
US 11731983B2 · Miwa · 2023 [cited by applicant]
US 11793812B2 · Johnson et al. · 2023 [cited by applicant]
US 11795178B2 · Fukuoka et al. · 2023 [cited by applicant]
US 11957684B2 · Johnson et al. · 2024 [cited by applicant]
US 12097198B2 · Rajasekhar et al. · 2024 [cited by applicant]
US 20030055269A1 · Fukuoka et al. · 2003 [cited by applicant]
US 20040014634A1 · Bantick et al. · 2004 [cited by applicant]
US 20060160829A1 · Cho et al. · 2006 [cited by applicant]
US 20080287465A1 · Tumey et al. · 2008 [cited by applicant]
US 20090048273A1 · Furuya et al. · 2009 [cited by applicant]
US 20110172249A1 · Kamikawa et al. · 2011 [cited by applicant]
US 20150266891A1 · Fukuoka et al. · 2015 [cited by applicant]
US 20170210753A1 · Fukuoka et al. · 2017 [cited by applicant]
US 20190224196A1 · Rajasekhar et al. · 2019 [cited by applicant]
US 20190262346A1 · Johnson et al. · 2019 [cited by applicant]
US 20200000730A1 · Yamane et al. · 2020 [cited by applicant]
US 20210205303A1 · Rajasekhar et al. · 2021 [cited by applicant]
US 20210401841A1 · Johnson et al. · 2021 [cited by applicant]
US 20220135585A1 · Miwa · 2022 [cited by applicant]
US 20220204525A1 · Fukuoka et al. · 2022 [cited by applicant]
US 20220227784A1 · Kantor et al. · 2022 [cited by applicant]
US 20220372044A1 · Jagusch et al. · 2022 [cited by applicant]
US 20230165800A1 · Alonzo et al. · 2023 [cited by applicant]
US 20230212184A1 · Fukuoka et al. · 2023 [cited by applicant]
US 20240165118A1 · Johnson et al. · 2024 [cited by applicant]
CA 3010509A1 · 2017 [cited by applicant]
CN 87101864A · 1987 [cited by applicant]
CN 1349536A · 2002 [cited by applicant]
CN 1406239A · 2003 [cited by applicant]
CN 1551883A · 2004 [cited by applicant]
CN 1761671A · 2006 [cited by applicant]
CN 1768065A · 2006 [cited by applicant]
CN 101048065A · 2007 [cited by applicant]
CN 111333633A · 2020 [cited by applicant]
CN 111423452A · 2020 [cited by applicant]
CN 112552312A · 2021 [cited by applicant]
CN 115417883A · 2022 [cited by applicant]
CN 115947734A · 2023 [cited by applicant]
EP 1266898A1 · 2002 [cited by applicant]
EP 1591446A1 · 2005 [cited by applicant]
EP 3666776A1 · 2020 [cited by applicant]
IN 312023 · 2023 [cited by applicant]
JP H06192170A · 1994 [cited by applicant]
JP H10298156A · 1998 [cited by applicant]
JP 2001278884A · 2001 [cited by applicant]
JP 2001316391A · 2001 [cited by applicant]
JP 2002088044A · 2002 [cited by applicant]
JP 2010229098A · 2010 [cited by applicant]
JP 2015532262A · 2015 [cited by applicant]
JP 2016041720A · 2016 [cited by applicant]
JP 2017088564A · 2017 [cited by applicant]
JP 2018538348A · 2018 [cited by applicant]
JP 2019038825A · 2019 [cited by applicant]
JP 2019511510A · 2019 [cited by applicant]
WO WO0056739A1 · 2000 [cited by applicant]
WO WO2004067535A1 · 2004 [cited by applicant]
WO WO2007011072A1 · 2007 [cited by applicant]
WO WO2010026993A1 · 2010 [cited by applicant]
WO WO2014051164A2 · 2014 [cited by applicant]
WO WO2014051164A3 · 2014 [cited by applicant]
WO WO2017172615A1 · 2017 [cited by applicant]
WO WO2018060463A2 · 2018 [cited by applicant]
WO WO2018060463A3 · 2018 [cited by applicant]
WO WO2018060501A2 · 2018 [cited by applicant]
WO WO2018060501A3 · 2018 [cited by applicant]
WO WO2019178304A1 · 2019 [cited by applicant]
WO WO20200230094A1 · 2020 [cited by applicant]
WO WO2021026011A1 · 2021 [cited by applicant]
WO WO2021027937A1 · 2021 [cited by applicant]
WO WO2021031148A1 · 2021 [cited by applicant]
WO WO2021069700A1 · 2021 [cited by applicant]
WO WO2021069711A1 · 2021 [cited by applicant]
WO WO2021239917A1 · 2021 [cited by applicant]
WO WO2022101303A1 · 2022 [cited by applicant]
WO WO2022166121A1 · 2022 [cited by applicant]
WO WO2023042214A1 · 2023 [cited by applicant]
WO WO2023066941A1 · 2023 [cited by applicant]
WO WO2023119333A1 · 2023 [cited by applicant]
WO WO2023194924A1 · 2023 [cited by applicant]
Byrn, S. et al. (1995). “Pharmaceutical solids: A Strategic Approach to Regulatory Considerations,” Pharma. Res. 12:945-954. [cited by applicant]
Caira, M.R. (1998). “Crystalline polymorphism of organic compounds,” Topics in Curr. Chem. 198:163-208. [cited by applicant]
Chinese Office Action mailed on Nov. 17, 2016, for Chinese patent application No. 201380051107.2, filed on Sep. 27, 2013, 14 pages (with English translation). [cited by applicant]
Ex Parte Quayle Action mailed on Jun. 5, 2018, for U.S. Appl. No. 15/481,505, filed Apr. 7, 2017, 4 pages. [cited by applicant]
Extended European Search Report mailed on Nov. 9, 2018, for EP Application No. 18 185 835.8, filed on Sep. 27, 2013, 5 pages. [cited by applicant]
Holzer, G. et al. (1997). “Kα [cited by applicant]
International Search Report mailed on Mar. 24, 2014, for PCT Application No. PCT/JP2013/077013, filed on Sep. 27, 2013, 7 pages. [cited by applicant]
International Search Report mailed on Jan. 25, 2021, for PCT Application No. PCT/EP2020/078493, filed on Oct. 9, 2020, 6 pages. [cited by applicant]
International Search Report malled on Jan. 25, 2021, for PCT Application No. PCT/EP2020/078475, filed on Oct. 9, 2020, 6 pages. [cited by applicant]
Liu Xin-yong et al. (2011). Laboratory Preparation, Separation and Purification Technology of Organic Compounds, People's Medical Publishing House, pp. 103-106 (with English translation). [cited by applicant]
Miwa, K. et al. (2011). “Discovery of 1-{4-[1-(2,6-Difluorobenzyl)-5-[(dimethylamino)methyl]-3-(6-methoxypyridazin-3-yl)-2 ,4-dioxo-I,2,3,4-tetrahydrothieno[2,3- d ]pyrimidin-6-yl]phenyl}-3-methoxyurea (TAK-385) as a Po… [cited by applicant]
Non-Final Office Action mailed on May 12, 2016, for U.S. Appl. No. 14/432,188, filed Mar. 27, 2015, 4 pages. [cited by applicant]
Non-Final Office Action mailed on Nov. 21, 2017, for U.S. Appl. No. 15/481,505, filed Apr. 7, 2017, 7 pages. [cited by applicant]
Non-Final Office Action mailed on Mar. 22, 2019, for U.S. Appl. No. 16/034,002, filed Jul. 12, 2018, 4 pages. [cited by applicant]
Non-Final Office Action mailed on Jun. 6, 2019, for U.S. Appl. No. 16/116,804, filed Aug. 29, 2018, 6 pages. [cited by applicant]
Non-Final Office Action mailed on Aug. 24, 2020, for U.S. Appl. No. 16/710,390, filed Dec. 11, 2019, 4 pages. [cited by applicant]
Notice of Allowance mailed on May 17, 2017, for U.S. Appl. No. 14/432,188, filed Mar. 27, 2015, 5 pages. [cited by applicant]
Notice of Allowance mailed on Sep. 17, 2018, for U.S. Appl. No. 15/481,505, filed Apr. 7, 2017, 5 pages. [cited by applicant]
Notice of Allowance mailed on Jul. 3, 2019, for U.S. Appl. No. 16/034,002, filed Jul. 12, 2018, 5 pages. [cited by applicant]
Notice of Allowance mailed on Sep. 12, 2019, for U.S. Appl. No. 16/116,804, filed Aug. 29, 2018, 6 pages. [cited by applicant]
Notice of Allowance mailed on Nov. 26, 2019, for U.S. Appl. No. 16/116,804, filed Aug. 29, 2018, 2 pages. [cited by applicant]
Notice of Allowance mailed on Mar. 10, 2021, for U.S. Appl. No. 16/710,390, filed jon Dec. 11, 2019, 6 pages. [cited by applicant]
Written Opinion of the International Searching Authority mailed on Mar. 24, 2014, for PCT Application No. PCT/JP2013/077013, filed on Sep. 27, 2013, 10 pages. [cited by applicant]
Written Opinion of the International Searching Authority mailed on Jan. 25, 2021, for PCT Application No. PCT/EP2020/078493, filed on Oct. 9, 2020, 10 pages. [cited by applicant]
Written Opinion of the International Searching Authority mailed on Jan. 25, 2021, for PCT Application No. PCT/EP2020/078475, filed on Oct. 9, 2020, 11 pages. [cited by applicant]
Yang, Lv et al. (2009). Polymorphic Drugs, People's Medical Publishing House, pp. 24-25 (with English translation). [cited by applicant]
U.S. Appl. No. 17/349,584, filed Jun. 16, 2021, by Fukuoka et al. [cited by applicant]
U.S. Appl. No. 17/716,965, filed Apr. 8, 2022, by Jagusch et al. [cited by applicant]
Corrected Notice of Allowability mailed on Jul. 12, 2023, for U.S. Appl. No. 17/349,584, filed Jun. 16, 2021, 2 pages. [cited by applicant]
Corrected Notice of Allowability mailed on Sep. 1, 2023, for U.S. Appl. No. 17/694,635, filed Mar. 14, 2022, 2 pages. [cited by applicant]
Ding, Z. et al. (Oct. 22, 2018). “Crystalline forms,” Chinese Pharmaceutical Journal, pp. 85 (with English Translation). [cited by applicant]
Extended European Search Report mailed on Nov. 25, 2022, for EP Application No. 22 168 256.0, filed on Sep. 27, 2013, 8 pages. [cited by applicant]
Guo, Z. et al. (2003). “Synthesis and structure-activity relationships of Thieno[2,3-d]pyrimidine-2,4-dione derivatives as potent GnRH receptor antagonists,” Bioorganic & Medicinal Chemistry Letters 13:3617-3622. [cited by applicant]
Hirayama, N. (2008). Organic Compound Crystal Production Handbook, 32 pages (English Summary Provided). [cited by applicant]
Huang Li et al. (Nov. 18, 2018). “Progress in the study of new drug therapies for endometriosis,” The Journal of Practical Medicine, vol. 34, No. 21, pp. 164-167 (with English Abstract Provided). [cited by applicant]
International Search Report mailed on Jan. 26, 2023, for PCT Application No. PCT/EP2022/078989, filed on Oct. 18, 2022, 4 pages. [cited by applicant]
Kumar, J.S. et al. (2001). “Simple and chemoselective reduction of aromatic nitro compounds to aromatic amines: Reduction with hydriodic acid revisited,” Tetrahedron Letter 42:5601-5603. [cited by applicant]
Non-Final Office Action mailed on Apr. 10, 2023, for U.S. Appl. No. 17/349,584, filed Jun. 16, 2021, 7 pages. [cited by applicant]
Non-Final Office Action mailed on Jul. 18, 2024, for U.S. Appl. No. 18/121,886, filed Mar. 15, 2023, 6 pages. [cited by applicant]
Notice of Allowance mailed on May 10, 2023, for U.S. Appl. No. 17/349,584, filed Jun. 16, 2021, 5 pages. [cited by applicant]
Notice of Allowance mailed on Aug. 17, 2023, for U.S. Appl. No. 17/694,635, filed Mar. 14, 2022, 6 pages. [cited by applicant]
Notice of Allowance mailed on Aug. 21, 2024, for U.S. Appl. No. 18/121,886, filed Mar. 15, 2023, 5 pages. [cited by applicant]
Sasaki, S. et al. (2002). “Discovery of a thieno[2,3-d]pyrimidine-2,4-dione bearing a p-methoxyureidophenyl moiety at the 6-position: a highly potent and orally bioavailable non-peptide antagonist for the human luteiniz… [cited by applicant]
Serizawa, K. (2002). Optimization of salt and crystal forms and crystallization techniques, Pharm. Tech. Japan, vol. 18, No. 10, pp. 81-96 (with English Abstract Provided). [cited by applicant]
Written Opinion of the International Searching Authority mailed on Jan. 26, 2023, for PCT Application No. PCT/EP2022/078989, filed on Oct. 18, 2022, 8 pages. [cited by applicant]
Zhang Hongli et al. (Dec. 31, 2016). “Microstructure and performance in the desolvation process of HNS/dioxane solvate by In-situ XRD method,” Chinese Journal of Energetic Materials, vol. 24, No. 4, pp. 363-367 (with En… [cited by applicant]
U.S. Appl. No. 18/195,654, filed May 10, 2023, by Migoya et al. [cited by applicant]
U.S. Appl. No. 18/392,110, filed Dec. 21, 2023, by Migoya et al. [cited by applicant]
U.S. Appl. No. 18/427,033, filed Jan. 30, 2024, by Johnson et al. [cited by applicant]
U.S. Appl. No. 18/636,642, filed Apr. 16, 2024, by Vlahova et al. [cited by applicant]
U.S. Appl. No. 18/758,904, filed Jun. 28, 2024, by Rajasekhar et al. [cited by applicant]
U.S. Appl. No. 18/792,752, filed Aug. 2, 2024, by Rajasekhar et al. [cited by applicant]
U.S. Appl. No. 18/797,045, filed Aug. 7, 2024, by Migoya et al. [cited by applicant]
U.S. Appl. No. 18/926,157, filed Oct. 24, 2024, by Johnson et al. [cited by applicant]
U.S. Appl. No. 18/927,346, filed Oct. 25, 2024, by Miwa. [cited by applicant]
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