IP Library Granted Patent US 12,441,730
Granted Patent B2
US 12,441,730 · App. 17/783,967 · Granted Oct 14, 2025

PRMT5 inhibitors

Inventors: Michelle Machacek (Belmont, MA); Michael D. Altman (Needham, MA); Shuhei Kawamura (Cambridge, MA); Michael H. Reutershan (Brighton, MA); David L. Sloman (Newton, MA); Phieng Siliphaivanh (Newton Highlands, MA); Sebastian E. Schneider (Boston, MA); Charles S. Yeung (Dedham, MA); David J. Witter (Ontario, CA); Craig R. Gibeau (Northborough, MA)
Assignee: Merck Sharp & Dohme LLC
C07D471/10C07D519/00
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Quick Facts
Patent No.
US 12,441,730
App. No.
17/783,967
Granted
Oct 14, 2025
Kind
B2
Abstract

The present invention provides a compound of Formula (I) (I) and the pharmaceutically acceptable salts, esters, and prodrugs thereof, which are PRMT5 inhibitors. Also provided are methods of making compounds of Formula I, pharmaceutical compositions comprising compounds of Formula I, and methods of using these compounds to treat cancer, sickle cell, and hereditary persistence of foetal hemoglobin (HPFH) mutations.

Claims (107)

1. A compound of formula I,

or a pharmaceutically acceptable salt thereof, wherein

Y is H or OH;

Y 1 is H or OH;

R 1 is H, halogen, or C 1-6 alkyl optionally substituted with halogen;

R 2 is H or D;

each t is independently 0, 1, or 2;

A is

(a) phenyl, optionally substituted with one or two moieties independently selected from OC 1-6 alkyl, halogen, C(O)R 5 , O-cyclopropyl, or an unsaturated heterocycle having 1-3 nitrogen atoms and 0-1 oxygen atoms wherein the unsaturated heterocycle is optionally substituted with C 1-6 alkyl, wherein R 5 is a saturated heterocycle having 1 nitrogen atom and 1 oxygen atom;

(b) an unsaturated 6-membered heterocycle with 1-2 N atoms, wherein the heterocycle is substituted with NHR 3 , wherein the heterocycle is additionally optionally substituted with 1 or 2 halogens, wherein R 3 is saturated heterocycle with 1 nitrogen atom, wherein the R 3 nitrogen is substituted with C(O)C 1-6 alkyl and wherein the R 3 heterocycle is optionally substituted with 1 or 2 halogens;

(c) an unsaturated 6-membered heterocycle with 1 N atom optionally substituted with one, two or three moieties independently selected from halogen, ═O, C 1-6 alkyl, C 3-6 cycloalkyl, C 1-6 fluoroalkyl, 5-membered unsaturated heterocycle having 3 or 4 N atoms, OH, OC 1-6 alkyl, OC 1-6 alkoxy, NC 1-6 alkyl, or NHR 4 , wherein R 4 is saturated heterocycle having 1N atom optionally substituted with one or two C(O)C 1-6 alkyl and wherein the C(O)C 1-6 alkyl is optionally substituted with one or two fluoro atoms;

(d)

i. an unsaturated 5-membered heterocycle with 1 or 2 Nitrogen atoms and 0-1 Oxygen atom optionally substituted with a 5-membered unsaturated heterocycle with 1 nitrogen atom and 1 oxygen atom wherein each heterocycle is independently optionally substituted with C 1-6 alkyl,

ii. an unsaturated 5-membered heterocycle with 2 N atoms optionally substituted with CHF 2 , cyclopropyl, or a phenyl optionally mono-substituted, independently disubstituted, or independently trisubstituted with halogen, C 1-6 alkyl, OC 1-6 alkyl, or C 1-6 fluoroalkyl,

(e) an unsaturated 8-11-membered bicyclic heterocycle with 1-4 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms, unsubstituted, mono-substituted, independently disubstituted, or independently trisubstituted with

i) CR 6 R 7 R 8 , wherein

R 6 is H, C 1-6 alkyl, or halogen,

R 7 is H, C 1-6 alkyl, halogen or OH, and

R 8 is H, CN, C 1-6 alkyl optionally substituted with CN, halogen, OH, OC 1-6 alkyl, or C 1-6 haloalkyl;

ii) C(O)NR 9 R 10 , wherein

R 9 is H, C 1-6 alkyl, halogen, or C 1-6 haloalkyl, and

R 10 is H, C 1-6 alkyl, C 1-6 alkyl (C 1-6 alkyl) 1-2 , halogen, or C 1-6 haloalkyl,

iii) CN;

iv) C 3 to C 6 saturated or unsaturated carbocycle optionally mono-substituted, independently disubstituted, or independently trisubstituted with C 1-6 alkyl, 1-3 halogens, or CN;

v) halogen;

vi) C 0-6 alkylO(CH 2 ) 0-2 R 11 , wherein:

R 11 is H, C 1-6 alkyl, (C 1-6 alkyl)(OC 1-6 alkyl), OC 1-6 alkyl, C 1-6 alkyl(C 1-6 alkyl) 1-2 , C 1-6 alkyl(C 1-6 alkyl) 1-2 OH, C 3-6 heterocycle or C 3-6 cycloalkyl wherein the C 3-6 heterocycle or C 3-6 cycloalkyl are optionally mono-substituted, independently disubstituted, or independently trisubstituted with C 1-6 alkyl, halogen, CN, or ═O;

vii) ═O;

viii) C 3-6 heterocycle or C 3-6 cycloalkyl wherein the C 3-6 heterocycle or C 3-6 cycloalkyl are optionally mono-substituted, independently disubstituted, or independently trisubstituted with C 1-6 alkyl, C 1-6 cycloalkyl, halogen, CN, or ═O;

ix) N(C 1-6 alkyl)(C 1-6 alkyl)(OC 1-6 alkyl) or N(C 1-6 alkyl)(C 1-6 alkyl), wherein the alkyl moiety is optionally substituted with 5-membered unsaturated ring with 2 nitrogen atoms, 0-1 oxygen atom, wherein the ring is optionally substituted with C 1-6 alkyl, halogen, or C 1-6 haloalkyl;

xi) C 3-6 heterocycle optionally mono-substituted, independently disubstituted, or independently trisubstituted with 5-membered unsaturated ring with 2 nitrogen,

xii) an unsaturated 8-11 membered bicyclic heterocycle with 1-4 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms, unsubstituted, mono-substituted, independently disubstituted, or independently trisubstituted with C 1-6 alkyl, or halogen,

xiii) unsaturated 5- or 6-membered heterocycle with 1-2 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms optionally mono-substituted or independently disubstituted with C 1-6 alkyl or OC 1-6 alkyl, wherein the alkyl is optionally substituted with 1-3 halogens xiv) C 1-6 alkyl optionally substituted with CN or halogen; or

(f) unsaturated 13-membered tricyclic heterocycle with 1 oxygen, wherein the tricyclic heterocycle is optionally substituted with OH,

provided that the compound of formula I is not:

2. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein

Y is H or OH;

Y 1 is H or OH;

(a) phenyl, optionally substituted with one or two moieties independently selected from OC 1-6 alkyl, halogen, C(O)R 5 , O-cyclopropyl, or an unsaturated heterocycle having 1-3 nitrogen atoms and 0-1 oxygen atoms wherein the unsaturated heterocycle is optionally substituted with C 1-6 alkyl, wherein R 5 is a saturated heterocycle having 1 nitrogen atom and 1 oxygen atom;

(b) an unsaturated 6-membered heterocycle with 1-2 N atoms, wherein the heterocycle is substituted with NHR 3 , wherein the heterocycle is additionally optionally substituted with 1 or 2 halogens, wherein R 3 is saturated heterocycle with 1 nitrogen atom, wherein the R 3 nitrogen is substituted with C(O)C 1-6 alkyl and wherein the R 3 heterocycle is optionally substituted with 1 or 2 halogens;

(c) an unsaturated 6-membered heterocycle with 1 N atom optionally substituted with one, two or three moieties independently selected from halogen, ═O, C 1-6 alkyl, C 3-6 cycloalkyl, C 1-6 fluoroalkyl, 5-membered unsaturated heterocycle having 3 or 4 N atoms, OH, OC 1-6 alkyl, OC 1-6 alkoxy, NC 1-6 alkyl, or NHR 4 , wherein R 4 is saturated heterocycle having 1N atom optionally substituted with one or two C(O)C 1-6 alkyl and wherein the C(O)C 1-6 alkyl is optionally substituted with one or two fluoro atoms;

(d)

i. an unsaturated 5-membered heterocycle with 1 or 2 Nitrogen atoms and 0-1 Oxygen atom optionally substituted with a 5-membered unsaturated heterocycle with 1 nitrogen atom and 1 oxygen atom wherein each heterocycle is independently optionally substituted with C 1-6 alkyl,

ii. an unsaturated 5-membered heterocycle with 2 N atoms optionally substituted with CHF 2 , cyclopropyl, or an phenyl optionally mono-substituted, independently disubstituted, or independently trisubstituted with halogen, C 1-6 alkyl, OC 1-6 alkyl, or C 1-6 fluoroalkyl,

(e) an unsaturated 8-11-membered bicyclic heterocycle with 1-4 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms, unsubstituted, mono-substituted, independently disubstituted, or independently trisubstituted with

i) CR 6 R 7 R 8 , wherein

R 6 is H, CH 3 , or F,

R 7 is H, CH 3 , F or OH, and

R 8 is H, CN, CH 3 , F, OH, OCH 3 , CF 3 , or CH 2 CN;

ii) C(O)NR 9 R 10 , wherein

R 9 is H, CH 3 , F, or CF 3 , and

R 10 is H, CH 3 , CH 3 (CH 3 ) 2 , F, or CF 3 ,

iii) CN;

iv) C 3 to C 6 saturated or unsaturated carbocycle optionally mono-substituted, independently disubstituted, or independently trisubstituted with C 1-6 alkyl, 1-3 halogens, or CN;

v) halogen;

vi) C 0-6 alkylO(CH 2 ) 0-2 R 11 , wherein:

R 11 is H, CH 3 , CH 2 OCH 3 , OCH 3 , CH(CH 3 ) 2 , C(CH 3 ) 2 OH,

x) N(C 1-6 alkyl)(C 1-6 alkyl)(OC 1-6 alkyl) or N(C 1-6 alkyl)(C 1-6 alkyl), wherein the alkyl moiety is optionally substituted with 5-membered unsaturated ring with 2 nitrogen atoms, 0-1 oxygen atom, wherein the ring is optionally substituted with C 1-6 alkyl, halogen, or C 1-6 haloalkyl;

xiii) unsaturated 5- or 6-membered heterocycle with 1-2 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms optionally mono-substituted or independently disubstituted with C 1-6 alkyl or OC 1-6 alkyl, wherein the alkyl is optionally substituted with 1-3 halogens xiv) C 1-6 alkyl optionally substituted with CN or halogen; or

(f) unsaturated 13-membered tricyclic heterocycle with 1 oxygen, wherein the tricyclic heterocycle is optionally substituted with OH.

3. The compound claim 1 , or a pharmaceutically acceptable salt thereof, wherein

Y is H or OH;

Y 1 is H or OH;

A is

(a) phenyl, optionally substituted with one or two moieties independently selected from OCH 2 CH 3 , Cl, O-cyclopropyl, C(O)R 5 , or an unsaturated 5-membered heterocycle having 1-3 nitrogen atoms and 0-1 oxygen atoms wherein the unsaturated heterocycle is optionally substituted with cyclopropyl or C 1-6 alkyl,

wherein R 5 is

(b) an unsaturated 6-membered heterocycle with 1 or 2 N atoms substituted with NHR 3 , wherein the heterocycle is additionally optionally substituted with 1 or 2 halogens, wherein R 3 is a saturated heterocycle with 1 nitrogen atom wherein the R 3 nitrogen is substituted with C(O)CH 3 , and wherein the R 3 heterocycle is additionally optionally independently substituted with 1 or 2 halogens;

(c) unsaturated 6-membered heterocycle with 1 N atom optionally substituted with one, two or three moieties independently selected from Cl, Br, F, ═O, CH 3 , CF 3 , CH 2 CF 3 , CH(CH 3 )CF 3 , OCH 2 CH 2 OH, NHCH 3 , cyclopropyl, OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 3 , OH, or 5-membered unsaturated heterocycle having 3 or 4 nitrogen atoms;

(d)

i. unsaturated 5-membered heterocycle with 1 nitrogen atom and 1 oxygen atom substituted with 5-membered unsaturated heterocycle with 1 nitrogen atom and 1 oxygen atom wherein each heterocycle is optionally independently substituted with CH 3 ,

ii. unsaturated 5-membered heterocycle with 2 nitrogen atoms optionally substituted with CHF 2 , cyclopropyl or an phenyl wherein the phenyl is optionally mono-substituted, independently disubstituted, or independently trisubstituted with F, CH 3 , OCH 3 , cyclopropyl, or CHF 2 ;

(e) unsaturated 8-11-membered bicyclic heterocycle with 1-4 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms, unsubstituted, mono-substituted, independently disubstituted, or independently trisubstituted with

Br, F, Cl, I, CH 3 , CN, CH(CH 3 ) 2 , CH 2 OH, C(CH 3 ) 2 OH, C(O)NHCH 3 , C(O)N(CH 3 ) 2 , CF 3 , CHF 2 , C(CH 3 ) 2 OCH 3 , CH(CH 3 )OCH 3 , CH 2 OCH 3 , CH 2 CH 2 OCH 3 , CH(OH)CF 3 , CH(OH)CH 3 , (CH 2 ) 2 CN, CH 2 CF 3 , CH(CH 3 ) 2 , CH 2 CH 3 , cyclopropyl, cyclopropyl-CH 3 , ═O, OH, OCH 3 , OCH 2 CH 3 , OCH(CH 3 ) 2 , O(CH 2 ) 2 OCH 3 , OCH 2 C(CH 3 ) 2 OH, N(CH 3 )(CH 2 ) 2 OCH 3 , CH(CH 3 )CN,

or

(f) unsaturated 13-membered tricyclic heterocycle with 1 O, wherein the tricyclic heterocycle is optionally substituted with OH.

4. The compound of claim 3 , or a pharmaceutically acceptable salt thereof, wherein

Y is H or OH;

Y 1 is H or OH;

A is

(a) phenyl, optionally substituted with one or two moieties independently selected from OCH 2 CH 3 , Cl, O-cyclopropyl, C(O)R 5 , or an unsaturated 5-membered heterocycle having 3 nitrogen atoms substituted with cyclopropyl or CH 3 , or an unsaturated 5-membered heterocycle having 2 nitrogen atoms and 1 oxygen atom optionally substituted with cyclopropyl,

wherein R 5 is

(b)

optionally substituted with 1 or 2 moieties independently selected from F or Cl;

(c)

optionally substituted with 1, 2, or 3 moieties independently selected from Cl, F, Br, ═O, CH 3 , CF 3 , CH 2 CF 3 , CH(CH 3 )CF 3 , OCH 2 CH 2 OH, NHCH 3 , cyclopropyl, OCH 2 CH 3 , OCH 2 CH 2 CH 3 , OCH 3 , OH,

(d)

optionally substituted with CHF 2 , cyclopropyl or an phenyl, wherein the phenyl is optionally mono-substituted, independently disubstituted, or independently trisubstituted with F, CH 3 , OCH 3 , cyclopropyl, or CHF 2 ,

(e) an unsaturated 8-11-membered bicyclic heterocycle with 1-4 nitrogen atoms, 0-1 oxygen atoms, and 0-1 sulfur atoms, selected from

wherein the bicyclic heterocycle is unsubstituted, mono-substituted, independently disubstituted, or independently trisubstituted with

Br, F, Cl, I, CH 3 , CN, CH(CH 3 ) 2 , CH 2 OH, C(CH 3 ) 2 OH, C(O)NHCH 3 , C(O)N(CH 3 ) 2 , CF 3 , CHF 2 , C(CH 3 ) 2 OCH 3 , CH(CH 3 )OCH 3 , CH 2 OCH 3 , CH 2 CH 2 OCH 3 , CH(OH)CF 3 , CH(OH)CH 3 , (CH 2 ) 2 CN, CH 2 CF 3 , CH(CH 3 ) 2 , CH 2 CH 3 , cyclopropyl, cyclopropyl-CH 3 , ═O, OH, OCH 3 , OCH 2 CH 3 , OCH(CH 3 ) 2 , O(CH 2 ) 2 OCH 3 , OCH 2 C(CH 3 ) 2 OH, N(CH 3 )(CH 2 ) 2 OCH 3 , CH(CH 3 )CN,

or

(f)

substituted with OH.

5. The compound of claim 4 , or a pharmaceutically acceptable salt thereof, wherein A is selected from

6. The compound of claim 5 , or a pharmaceutically acceptable salt thereof, wherein Y is OH and Y 1 is H.

7. The compound of claim 5 or a pharmaceutically acceptable salt thereof, wherein Y is H and Y 1 is OH.

8. The compound of claim 5 , or a pharmaceutically acceptable salt thereof, wherein Y is H and Y 1 is H.

9. The compound of claim 1 , of formula Ia

or a pharmaceutically acceptable salt thereof.

10. The compound of claim 1 , of formula Ib

or a pharmaceutically acceptable salt thereof.

11. The compound of claim 1 , of formula Ic,

or a pharmaceutically acceptable salt thereof.

12. The compound of claim 1 , which is one of the following:

or a pharmaceutically acceptable salt thereof.

13. A composition comprising a compound of claim 1 , or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.

14. A method for treating cancer comprising administering to a patient in need there of a compound of claim 1 , or a pharmaceutically acceptable salt thereof.

Assignments (2)
MERGER Recorded Jun 13, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 060176/0494 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 13, 2022
From: MACHACEK, MICHELLE; ALTMAN, MICHAEL D.; KAWAMURA, SHUHEI; REUTERSHAN, MICHAEL H.; SLOMAN, DAVID L.; SILIPHAIVANH, PHIENG; SCHNEIDER, SEBASTIAN E.; YEUNG, CHARLES S.; WITTER, DAVID J.; GIBEAU, CRAIG R.
To: MERCK SHARP & DOHME CORP.
Reel/Frame 060345/0299 →
Continuity (3)
Provisional Application 62949242 · Dec 17, 2019
Provisional Application 63025329 · May 15, 2020
Related Publication 20230114091A1 · Apr 13, 2023
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