IP Library Granted Patent US 11,885,812
Granted Patent B2
US 11,885,812 · App. 18/367,823 · Granted Jan 30, 2024

Methods for diagnosing systemic lupus erythematosus

Inventors: Thierry Dervieux (San Diego, CA); Cole Harris (Houston, TX)
Assignee: EXAGEN INC.
G01N33/6854G01N33/564G01N2800/104G01N2800/56
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Quick Facts
Patent No.
US 11,885,812
App. No.
18/367,823
Granted
Jan 30, 2024
Kind
B2
Abstract

Provided herein are methods of diagnosing and monitoring disease activity and response to treatment in patients having systemic lupus erythematosus using panels of biomarkers, such as at least one biomarker selected from the group consisting of B-lymphocyte-bound C4d, erythrocyte-bound C4d, platelet-bound C4d, and erythrocyte complement receptor type 1, and one further biomarker selected from the group consisting of anti-MCV antibody and anti-nuclear antibody.

Claims (38)

1. A method for treating systemic lupus erythematosus in a human subject in need thereof, wherein the human subject is negative for systemic lupus erythematosus based on a level of double-stranded DNA antibody; the method comprising:

(a) measuring a level of erythrocyte-bound complement component C4d (EC4d) marker in a blood sample obtained from the patient;

(b) measuring a level of B-lymphocyte-bound C4d complement component (BC4d) marker in the blood sample;

(c) measuring a level of anti-nuclear antibody (ANA) in the blood sample;

(d) determining a systemic lupus erythematosus risk score comprising the steps of:

(i) adjusting the level of EC4d by a weighting coefficient to produce a weighted score for EC4d;

(ii) adjusting the level of BC4d by a weighting coefficient to produce a weighted score for BC4d;

(iii) adjusting the level of ANA by a weighting coefficient to produce a weighted score for ANA; and

(iv) combining the weighted score for EC4d, BC4d, and ANA to generate the systemic lupus erythematosus risk score

(e) determining that the human subject has systemic lupus erythematosus based on the systemic lupus erythematosus risk score; and

(f) treating the human subject from step (e) that has systemic lupus erythematosus based on the systemic lupus erythematosus risk score with an effective amount of cyclophosphamide, a corticosteroid, mycophenolate, methotrexate, azathioprine, leflunomide, belimumab, or hydroxychloroquine.

2. The method of claim 1 , wherein step (a) comprises measuring the level of EC4d marker by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry; step (b) comprises measuring the level of BC4d marker by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry; and step (c) comprises measuring the level of ANA in the blood sample by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry.

3. The method of claim 1 , wherein measuring the level of EC4d marker comprises measuring the level of EC4d on the surface of erythrocytes; and wherein measuring the level of BC4d marker comprises measuring the level of BC4d on the surface of B lymphocytes.

4. The method of claim 1 , wherein the human subject has a level of EC4d marker that is less than 6 standard deviations above the mean EC4d marker among non-lupus patients; and wherein the human subject has a level of BC4d marker that is less than 6 standard deviations above the mean BC4d marker among non-lupus patients.

5. The method of claim 1 , further comprising measuring a level of anti-cyclic citrullinated peptide antibody in the blood sample, wherein the human subject is negative for rheumatoid arthritis based on the level of anti-cyclic citrullinated peptide antibody.

6. A method for treating systemic lupus erythematosus in a human subject in need thereof, wherein the human subject is negative for systemic lupus erythematosus based on a level of double-stranded DNA antibody; the method comprising:

(a) measuring a level of erythrocyte-bound complement component C4d (EC4d) marker in a blood sample obtained from the patient;

(b) measuring a level of B-lymphocyte-bound C4d complement component (BC4d) marker in the blood sample;

(c) measuring a level of anti-nuclear antibody (ANA) in the blood sample;

(d) determining a systemic lupus erythematosus risk score by adjusting the level of EC4d, the level of BC4d, and the level of ANA by a transformation analysis;

(e) determining that the human subject has systemic lupus erythematosus based on the systemic lupus erythematosus risk score; and

(f) treating the human subject from step (e) that has systemic lupus erythematosus based on the systemic lupus erythematosus risk score with an effective amount of cyclophosphamide, a corticosteroid, mycophenolate, methotrexate, azathioprine, leflunomide, belimumab, or hydroxychloroquine.

7. The method of claim 6 , wherein step (a) comprises measuring the level of EC4d marker by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry; step (b) comprises measuring the level of BC4d marker by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry; and step (c) comprises measuring the level of ANA in the blood sample by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry.

8. The method of claim 6 , wherein measuring the level of EC4d marker comprises measuring the level of EC4d on the surface of erythrocytes; and wherein measuring the level of BC4d marker comprises measuring the level of BC4d on the surface of B lymphocytes.

9. The method of claim 6 , wherein the human subject has a level of EC4d marker that is less than 6 standard deviations above the mean EC4d marker among non-lupus patients; and wherein the human subject has a level of BC4d marker that is less than 6 standard deviations above the mean BC4d marker among non-lupus patients.

10. The method of claim 6 , further comprising measuring a level of anti-cyclic citrullinated peptide antibody in the blood sample, wherein the human subject is negative for rheumatoid arthritis based on the level of anti-cyclic citrullinated peptide antibody.

11. A method for treating systemic lupus erythematosus in a human subject in need thereof, wherein the human subject is negative for systemic lupus erythematosus based on a level of double-stranded DNA antibody; the method comprising:

(a) measuring a level of erythrocyte-bound C4d (EC4d) marker, a level of B-lymphocyte-bound C4d (BC4d) marker, and a level of anti-nuclear antibody (ANA) in a blood sample obtained from the human subject;

(b) determining that the human subject has systemic lupus erythematosus based on the level of EC4d, the level of BC4d, and the level of ANA; and

(b) administering to the human subject an effective amount of cyclophosphamide, a corticosteroid, mycophenolate, methotrexate, azathioprine, leflunomide, belimumab, or hydroxychloroquine, thereby treating systemic lupus erythematosus.

12. The method of claim 11 , wherein the level of EC4d marker in the blood sample is measured by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry.

13. The method of claim 11 , wherein the level of BC4d marker in the blood sample is measured by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry.

14. The method of claim 11 , wherein measuring the level of EC4d marker comprises measuring the level of EC4d on the surface of erythrocytes.

15. The method of claim 11 , wherein measuring the level of BC4d marker comprises measuring the level of BC4d on the surface of B lymphocytes.

16. The method of claim 11 , wherein the level of ANA in the blood sample is measured by enzyme-linked immunosorbent assay, indirect immunofluorescence, radioimmunoassay, or flow cytometry.

17. The method of claim 11 , wherein the human subject has a level of EC4D marker that is less than 6 standard deviations above the mean EC4D marker among non-lupus patients.

18. The method of claim 11 , wherein the human subject has a level of BC4D marker that is less than 6 standard deviations above the mean BC4D marker among non-lupus patients.

19. The method of claim 11 , further comprising measuring a level of anti-cyclic citrullinated peptide antibody in the blood sample, wherein the human subject is negative for rheumatoid arthritis based on the level of anti-cyclic citrullinated peptide antibody.

Assignments (3)
SECURITY INTEREST Recorded Apr 25, 2025
From: EXAGEN INC.
To: PERCEPTIVE CREDIT HOLDINGS IV, LP
Reel/Frame 070952/0802 →
CHANGE OF NAME Recorded Dec 13, 2023
From: EXAGEN DIAGNOSTICS, INC.
To: EXAGEN INC.
Reel/Frame 065989/0256 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 13, 2023
From: DERVIEUX, THIERRY; HARRIS, COLE
To: EXAGEN DIAGNOSTICS, INC.
Reel/Frame 065859/0134 →
Continuity (8)
Continuation 18110229 · Feb 15, 2023
Continuation 17743289 · May 12, 2022
Continuation 16135694 · Sep 19, 2018
Continuation 13992086
Provisional Application 61472424 · Apr 6, 2011
Provisional Application 61442454 · Feb 14, 2011
Provisional Application 61441785 · Feb 11, 2011
Related Publication 20240003902A1 · Jan 4, 2024
Cited By (2)
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