IP Library › Granted Patent US 12,644,886
Granted Patent B2
US 12,644,886 · App. 18/489,398 · Granted Jun 2, 2026

Biosensor microarray compositions and methods

Inventors: Joshua LaBaer (Chandler, AZ); Bharath Takulapalli (Chandler, AZ)
Assignee: Arizona Board of Regents on behalf of Arizona State University
G01N33/54373G01N2440/00
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Quick Facts
Patent No.
US 12,644,886
App. No.
18/489,398
Granted
Jun 2, 2026
Kind
B2
Abstract

Described herein are biosensor microarrays comprising detector polypeptide monolayers substantially free of contaminants. Also provided are methods for generation of such biosensor microarrays by capture of polypeptides by arrays comprising capture moieties and associated sensors.

Claims (14)

1 . A method for generating a biosensor microarray, comprising:

(i) providing a plurality of capture moieties linked to a first solid support substrate surface;

(ii) providing an array of separate nanowells or microwells, in which in vitro translation reactions are performed, on a second solid support substrate surface, each nanowell or microwell comprising RNAs encoding detector polypeptides, ribosomes, and detector polypeptides translated from the RNAs;

(iii) providing a plurality of sensors in direct contact with or at a distance within about 1 millimeter (mm) of the detector polypeptides;

(iv) contacting the array with the plurality of capture moieties, whereby the detector polypeptides bind specifically to the capture moieties; and

(v) washing the contacted capture moieties to remove in vitro translation contaminants that are non-specifically bound to the capture moieties, whereby a biosensor microarray substantially free of in vitro translation contaminants is obtained.

2 . The method of claim 1 , wherein the array comprises at least 100 nanowells or microwells in which in vitro translation reactions are performed, wherein each nanowell or microwell comprises a translated detector polypeptide with a different amino acid sequence from the amino acid sequences of the other translated detector polypeptides.

3 . The method of claim 1 , wherein the capture moieties are provided as a monolayer.

4 . The method of claim 1 , wherein the array comprises sealable nanowells.

5 . The method of claim 4 , wherein each nanowell is about 250 microns in diameter and about 75 microns deep.

6 . The method of claim 5 , wherein each nanowell comprises a center to center distance between the nanowells of at least 400 nm to about 1,000 nm.

7 . The method of claim 1 , wherein the array comprises microwells.

8 . The method of claim 7 , wherein each microwell is between about 300 nm to about 1,000 nm in diameter.

9 . The method of claim 1 , wherein the array is on silicon wafers.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 3, 2023
From: LABAER, JOSHUA; TAKULAPALLI, BHARATH
To: ARIZONA BOARD OF REGENTS ON BEHALF OF ARIZONA STATE UNIVERSITY
Reel/Frame 065447/0191 →
Continuity (4)
Continuation 17201742 · Mar 15, 2021
Continuation 14776163
Provisional Application 61791952 · Mar 15, 2013
Related Publication 20240310369A1 · Sep 19, 2024
References Cited (70)
US 4402819A · Rechnitz · 1983 [cited by applicant]
US 4596772A · Kamei · 1986 [cited by applicant]
US 4713165A · Conover · 1987 [cited by applicant]
US 5973124A · Bayer · 1999 [cited by applicant]
US 6309842B1 · Dower · 2001 [cited by examiner]
US 6565813B1 · Garyantes · 2003 [cited by applicant]
US 6570158B2 · Feygin · 2003 [cited by applicant]
US 6602702B1 · McDevitt · 2003 [cited by applicant]
US 6913896B1 · Raven · 2005 [cited by applicant]
US 7378280B2 · Quake · 2008 [cited by applicant]
US 7648828B2 · Chan-Hui · 2010 [cited by applicant]
US 9250229B2 · Holmes · 2016 [cited by applicant]
US 9523688B2 · Faure · 2016 [cited by applicant]
US 9619627B2 · Holmes · 2017 [cited by applicant]
US 10983118B2 · Labaer · 2021 [cited by examiner]
US 11828753B2 · Labaer · 2023 [cited by examiner]
US 20020058273A1 · Shipwash · 2002 [cited by applicant]
US 20020090649A1 · Chan · 2002 [cited by applicant]
US 20030017507A1 · Johnson · 2003 [cited by applicant]
US 20030113738A1 · Liu · 2003 [cited by applicant]
US 20030207290A1 · Kenten · 2003 [cited by examiner]
US 20040146516A1 · Roben · 2004 [cited by applicant]
US 20040157271A1 · Kirakossian · 2004 [cited by applicant]
US 20040161748A1 · He · 2004 [cited by applicant]
US 20040171034A1 · Agnew · 2004 [cited by applicant]
US 20050048580A1 · Labaer · 2005 [cited by applicant]
US 20050095661A1 · Hamon · 2005 [cited by applicant]
US 20100081132A1 · Horesh · 2010 [cited by applicant]
US 20100297250A1 · Boons · 2010 [cited by applicant]
US 20120208174A1 · Galush · 2012 [cited by applicant]
US 20130293884A1 · Lee · 2013 [cited by applicant]
US 20140106469A1 · Wu · 2014 [cited by applicant]
US 20140371091A1 · Wiktor · 2014 [cited by applicant]
US 20150211048A1 · Ramsey · 2015 [cited by applicant]
US 20150293089A1 · Araz · 2015 [cited by applicant]
US 20170138942A1 · Fan · 2017 [cited by applicant]
WO 2005075996A1 · 2005 [cited by applicant]
WO 2006014424A2 · 2006 [cited by applicant]
WO 2006133476A2 · 2006 [cited by applicant]
WO 2006013110A1 · 2009 [cited by applicant]
WO 2010100265A1 · 2010 [cited by applicant]
WO 2011035177A2 · 2011 [cited by applicant]
WO 2013045700A1 · 2013 [cited by applicant]
WO 2013174942A1 · 2013 [cited by applicant]
WO 2013186359A1 · 2013 [cited by applicant]
WO 2014143954A2 · 2014 [cited by applicant]
Angenendt, P., et al. “Cell-free protein expression and functional assay in nanowell chip format.” Analytical chemistry 76.7 (2004): 1844-1849. [cited by applicant]
Ariyasu, S. et al. Selective capture and collection of live target cells using a photoreactive silicon wafer device modified with antibodies via a photocleavable linker. Langmuir, 2012, 28(36): 13118-13126. [cited by applicant]
Assay designs for immobilization of his-tagged proteins. Dec. 14, 2010. [Retrieved from internet Mar. 17, 2016: http://www.siliconkinetics.com/pdf/Ski_Assay_Designs_for_Immobilization_AN13.pdf]: total pp. 4. [cited by applicant]
Berrade, Luis; Garcia, Angie E.; Camarero, Julio A. Protein Microarrays: Novel Developments and Applications. Pharm. Res., 2011, vol. 28(7): 1480-1499. [cited by applicant]
Boon, E.M., et al. An electrical probe of protein-DNA interactions on DNA-modified surfaces. Nat. Biotechnol., 2002, vol. 20(3): 282-286. [cited by applicant]
Chandra, H. et al. “Cell-free synthesis-based protein microarrays and their applications.” Proteomics 10.4 (2010): 717-730. [cited by applicant]
Funeriu, D.P., et al. Enzyme family-specific and activity-based screening of chemical libraries using enzyme microarrays. Nat. Biotechnol. 2005, 23(5): 622-627. [cited by applicant]
Gropeanu, M. et al. A versatile toolbox for multiplex protein micropatterning by laser lithography. Small, 2013, 9(6): 838-884. [cited by applicant]
Hirsch, J. D., et al. Easily reversible desthiobiotin binding to streptavidin, avidin, and other biotin-binding proteins: uses for protein labeling, detection, and isolation. Anal. Biochem. 2002, 308: 343-357. [cited by applicant]
International Search Report for PCT application No. PCT/US2014/028154 filed on Mar. 14, 2014. [cited by applicant]
Kyo, M., et al. “Label-free detection of proteins in crude cell lysate with antibody arrays by a surface plasmon resonance imaging technique.” Analytical chemistry 77.22 (2005): 7115-7121. [cited by applicant]
Ladd, J., et al. “Label-free detection of cancer biomarker candidates using surface plasmon resonance imaging.” Analytical and bioanalytical chemistry 393.4 (2009): 1157-1163. [cited by applicant]
Lee, H. J., et al. “Surface plasmon resonance imaging measurements of antibody arrays for the multiplexed detection of low molecular weight protein biomarkers.” Analytical chemistry 78.18 (2006): 6504-6510. [cited by applicant]
Link, H., et al. Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo. Nature Biotechnology, 2013, 31(4): 357-361. [cited by applicant]
MacBeath, G. and Schreiber, SL. Printing proteins as microarrays for high-throughput function determination. Science, 2000, vol. 289 (5485): 1760-1763. [cited by applicant]
MacBeath, G., et al. Printing Small Molecules as Microarrays and Detecting Protein-Ligand Interactions en Masse. J. Am. Chem. Soc. 1999, 121: 7967-7968. [cited by applicant]
Moth-Poulsen, K. et al. Optically induced linking of protein and nanoparticles to gold surfaces.Bioconjug Chem, 2010, 21(6): 1056-1061. [cited by applicant]
Samanta, D. et al. Immobilization of bio-macromolecules on self-assebled monolayers: methods and sensor applications. Chem Soc rev, 2011, 40(5): 2567-2592. [cited by applicant]
Seefeld, T.H., et al. On-chip synthesis of protein microarrays from DNA microarrays via coupled in vitro transcription and translation for surface plasmon resonance imaging biosensor applications. J. Am. Chem. Soc. 2012… [cited by applicant]
Stern, E., et al. Label-free biomarker detection from whole blood. Nat. Nanotechnol. 2010, 5(2): 138-142. [cited by applicant]
Takulapalli, B. R., et al. High Density Diffusion-Free Nanowell Arrays. J. Proteome Res. 2012, 11(8): 4382-4391. [cited by applicant]
Templin, M.F., et al. Protein microarray technology. Drug Discovery Today, 2002, vol. 7(15): 815-822. [cited by applicant]
Wang, W., et al. Label-free detection of small-molecule-protein interactions by using nanowire nanosensors. Proc. of nat. acad. sci., 2005 Volume:102(9):3208-3212. [cited by applicant]
Yang, M. et al. Bioreactive surfaces prepared via the self-assembly of dendron thiols and subsequent dendrimer bridging reactions. Langmuir, 2005, 21(5): 1858-1865. [cited by applicant]