IP Library › Granted Patent US 12,246,039
Granted Patent B2
US 12,246,039 · App. 18/585,158 · Granted Mar 11, 2025

Peptides displayed by HLA for use in immunotherapy against different types of cancers

Inventors: Ricarda Hannen (Tuebingen, DE); Jens Hukelmann (Tuebingen, DE); Florian Koehler (Tuebingen, DE); Daniel Johannes Kowalewski (Tuebingen, DE); Heiko Schuster (Tuebingen, DE); Oliver Schoor (Tuebingen, DE); Michael Roemer (Tuebingen, DE); Chih-Chiang Tsou (Houston, TX); Jens Fritsche (Tuebingen, DE)
Assignee: Immatics Biotechnologies GmbH
A61K35/17A61K39/0011A61P35/00C07K14/4748C12N5/0636
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,246,039
App. No.
18/585,158
Granted
Mar 11, 2025
Kind
B2
Abstract

The invention relates to a peptide comprising an amino acid sequence selected from the group consisting of (i) SEQ ID NO: 1 to SEQ ID NO: 216, and (ii) a variant sequence thereof which maintains capacity to bind to MHC molecule(s) and/or induce T cells cross-reacting with said variant peptide, or a pharmaceutically acceptable salt thereof.

Claims (20)

1. A peptide consisting of the amino acid sequence AYIPFPPLI (SEQ ID NO: 33) in the form of a pharmaceutically acceptable salt.

2. The peptide of claim 1 , wherein the pharmaceutically acceptable salt is chloride salt.

3. The peptide of claim 1 , wherein the pharmaceutically acceptable salt is acetate salt.

4. A composition comprising the peptide of claim 1 and a pharmaceutically acceptable carrier.

5. The composition of claim 4 , wherein the peptide is in the form of a chloride salt.

6. The composition of claim 4 , wherein the peptide is in the form of an acetate salt.

7. The composition of claim 4 , further comprising an adjuvant selected from the group consisting of anti-CD40 antibody, imiquimod, resiquimod, cyclophosphamide, sunitinib, bevacizumab, interferon-alpha, interferon-beta, CpG oligonucleotides and derivatives, poly-(I: C) and derivatives, RNA, sildenafil, particulate formulations with poly (lactide co-glycolide) (PLG), virosomes, and cytokines comprising eotaxin, granulocyte colony-stimulating factor (G-CSF), granulocyte-macrophage colony-stimulating factor (GM-CSF), interferon (INF)-γ, interleukin (IL)-1α, macrophage colony-stimulating factor (M-CSF), IL-1β, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-10, IL-12p40, IL-13, IL-18, IL-15, IL-17, interferon γ-induced protein 10 kDa (IP-10), macrophage inflammatory protein (MIP)-2, keratinocyte chemoattractant (KC), leukemia inhibitory factor (LIF), lipopolysaccharide-induced CXC chemokine (LIX), monocyte chemoattractant protein-1 (MCP-1), MIP-1α, MIP-1β, monokine induced by interferon-gamma (MIG), RANTES, tumor necrosis factor (TNF)-α, IL-12p70, vascular endothelial growth factor (VEGF), IL-9, and IL-21.

8. The composition of claim 7 , wherein the adjuvant is IL-2.

9. The composition of claim 7 , wherein the adjuvant is IL-15.

10. A pegylated peptide consisting of the amino acid sequence of AYIPFPPLI (SEQ ID NO: 33) or a pharmaceutically acceptable salt thereof modified with PEG.

11. The pegylated peptide of claim 10 , wherein the pharmaceutically acceptable salt is chloride salt.

12. The pegylated peptide of claim 10 , wherein the pharmaceutically acceptable salt is acetate salt.

13. A peptide consisting of the amino acid sequence AYIPFPPLI (SEQ ID NO: 33) in the form of a salt.

14. A method of treating a patient who has cancer, comprising administering to said patient a population of activated T cells that kill cancer cells that present a peptide consisting of the amino acid sequence of AYIPFPPLI (SEQ ID NO: 33), wherein the cancer is selected from the group consisting of acute myeloid leukemia, breast cancer, cholangiocellular carcinoma, chronic lymphocytic leukemia, colorectal cancer, gallbladder cancer, glioblastoma, gastric cancer, gastro-esophageal junction cancer, hepatocellular carcinoma, head and neck squamous cell carcinoma, melanoma, non-Hodgkin lymphoma, non-small cell lung cancer, ovarian cancer, esophageal cancer, pancreatic cancer, prostate cancer, renal cell carcinoma, small cell lung cancer, urinary bladder carcinoma, and uterine endometrial cancer.

15. The method of claim 14 , wherein the T cells are transduced with a T cell receptor (TCR) that binds the peptide in a complex with an MHC class I molecule on the surface of the cancer cells.

16. The method of claim 14 , wherein the cancer is hepatocellular carcinoma.

17. The method of claim 14 , wherein the cancer is prostate cancer.

18. The method of claim 14 , further comprising administering to said patient an adjuvant selected from the group consisting of anti-CD40 antibody, imiquimod, resiquimod, cyclophosphamide, sunitinib, bevacizumab, interferon-alpha, interferon-beta, CpG oligonucleotides and derivatives, poly-(I: C) and derivatives, RNA, sildenafil, particulate formulations with poly (lactide co-glycolide) (PLG), virosomes, and cytokines comprising eotaxin, granulocyte colony-stimulating factor (G-CSF), granulocyte-macrophage colony-stimulating factor (GM-CSF), interferon (INF)-γ, interleukin (IL)-1α, macrophage colony-stimulating factor (M-CSF), IL-1β, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-10, IL-12p40, IL-13, IL-18, IL-15, IL-17, interferon γ-induced protein 10 kDa (IP-10), macrophage inflammatory protein (MIP)-2, keratinocyte chemoattractant (KC), leukemia inhibitory factor (LIF), lipopolysaccharide-induced CXC chemokine (LIX), monocyte chemoattractant protein-1 (MCP-1), MIP-1α, MIP-1β, monokine induced by interferon-gamma (MIG), RANTES, tumor necrosis factor (TNF)-α, IL-12p70, vascular endothelial growth factor (VEGF), IL-9, and IL-21.

19. The method of claim 18 , wherein the adjuvant is IL-2.

20. The method of claim 18 , wherein the adjuvant is IL-15.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 6, 2024
From: HANNEN, RICARDA; HUKELMANN, JENS; KOEHLER, FLORIAN; KOWALEWSKI, DANIEL JOHANNES; SCHUSTER, HEIKO; SCHOOR, OLIVER, DR.; ROEMER, MICHAEL; FRITSCHE, JENS; TSOU, CHIH-CHIANG
To: IMMATICS BIOTECHNOLOGIES GMBH
Reel/Frame 066664/0750 →
Priority Claims (1)
DE 102021100809.3 · Jan 15, 2021 · national
Continuity (4)
Division 17576866 · Jan 14, 2022
Provisional Application 63272878 · Oct 28, 2021
Provisional Application 63137985 · Jan 15, 2021
Related Publication 20240245723A1 · Jul 25, 2024
References Cited (32)
US 7807642B2 · Dengjel et al. · 2010 [cited by applicant]
US 7833969B2 · Dengjel et al. · 2010 [cited by applicant]
US 7833970B2 · Dengjel et al. · 2010 [cited by applicant]
US 8084592B2 · Bot et al. · 2011 [cited by applicant]
US 10196432B2 · Dengjel et al. · 2019 [cited by applicant]
US 10618945B2 · Dengjel et al. · 2020 [cited by applicant]
US 20080044484A1 · Minev · 2008 [cited by applicant]
US 20080206216A1 · Dengjel et al. · 2008 [cited by applicant]
US 20180148503A1 · Scheinberg et al. · 2018 [cited by applicant]
US 20200040057A1 · Schuster et al. · 2020 [cited by applicant]
US 20220002374A1 · Schuster et al. · 2022 [cited by applicant]
US 20220211760A1 · Kassiotis et al. · 2022 [cited by applicant]
EP 1760088B1 · 2008 [cited by applicant]
WO WO0175067A2 · 2001 [cited by examiner]
WO 2007028574A2 · 2007 [cited by applicant]
WO 2011050344A2 · 2011 [cited by applicant]
WO 2011119484A1 · 2011 [cited by applicant]
WO WO2013059426A1 · 2013 [cited by examiner]
WO 2020025576A1 · 2020 [cited by applicant]
WO 2020131586A2 · 2020 [cited by applicant]
WO 2021005339A1 · 2021 [cited by applicant]
WO 2023039673A1 · 2023 [cited by applicant]
Brossart, Peter and Bevan, Michael J. “Presentation of Exogenous Protein Antigens on Major Histocompatability Complex Class I Molecules by Dendritic Cells: Pathway of Presentation and Regulation by Cytokines” Blood, vol… [cited by applicant]
Dengjel, Joern, et al. “Unexpected Abundance of HLA Class II Presented Peptides in Primary Renal Cell Carcinomas” Clinical Cancer Research, vol. 12, No. 14, pp. 4163-4170, Jul. 15, 2006. [cited by applicant]
Fritsche, Jens, et al. “Translating Immunopeptidomics to Immunotherapy-Decision-Making for Patient and Personalized Target Selection” Proteomics, vol. 18, No. 12, e1700284, Jun. 2018. [cited by applicant]
International Search Report and Written Opinion mailed May 12, 2022 in PCT/EP2022/050797 (12 pages). [cited by applicant]
NCBI Reference Sequence: XP_055915951.1, Database Accession No. BIV41878, “uncharacterized protein LOC129948858 [Eupeodes corollae]” Retrieved on Sep. 5, 2023 from URL: https://www.ncbi.nlm.nih.gov/protein/XP_055915951.… [cited by applicant]
NCBI Reference Sequence: XP_055916174.1, Database Accession No. WO2011119484.368552, “serine-rich adhesin for platelets isoform X1 [Eupeodes corollae]” Retrieved on Sep. 5, 2023 from URL: https://www.ncbi.nlm.nih.gov/pr… [cited by applicant]
Rock, K.L., et al. “Presentation of exogenous antigen with class I major histocompatibility complex molecules” Science, vol. 249, No. 4971, pp. 918-921, Aug. 1990. [cited by applicant]
Singh-Jasuja, Harpreet et al. “The Tuebingen approach: identification, selection, and validation of tumor-associated HLA peptides for cancer therapy” Cancer Immunology, Immunotherapy, vol. 53, pp. 187-185, Jan. 2004. [cited by applicant]
Ankur Dhanik, et al., “In-silico discovery of cancer-specific peptide-HLA complexes for targeted therapy”, BMC Bioinformatics, 2016, vol. 17, No. 286. [cited by applicant]
DE Search Report of DE Application No. 102021100809.3, dated Jun. 10, 2021. [cited by applicant]