IP Library Granted Patent US 9,435,812
Granted Patent B2
US 9,435,812 · App. 13/596,266 · Granted Sep 6, 2016

Expression of ETS related gene (ERG) and phosphatase and tensin homolog (PTEN) correlates with prostate cancer capsular penetration

Inventors: Gary Pestano (Lafayette, CO); Ray B. Nagle (Tucson, AZ); Connie Cortez (Tucson, AZ); Kristie A. Vanpatten (Oro Valley, AZ); Amit M. Algotar (Tucson, AZ)
Assignees: Ventana Medical Systems, Inc.; The Arizona Board of Regents on behalf of the University of Arizona
G01N33/6893C12Q1/6886C12Q2600/118C12Q2600/158
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Quick Facts
Patent No.
US 9,435,812
App. No.
13/596,266
Granted
Sep 6, 2016
Kind
B2
Abstract

The disclosure provides methods for characterizing a prostate cancer sample by detecting expression of ERG, PTEN or both, changes in which relative to a normal control are shown herein to be correlated with prostate cancer capsular penetration and more aggressive forms of prostate cancer. Such methods are useful for the prognosis of prostate cancer capsular penetration and for making treatment decisions in patients with prostate cancer that has penetrated the capsule. Also provided are kits that can be used with such methods.

Claims (18)

1. A method for determining risk that a prostate cancer will penetrate the prostatic capsule, comprising:

contacting a prostate cancer sample isolated from a subject with an ETS related gene (ERG)-specific antibody and a phosphatase and tensin homolog (PTEN)-specific antibody;

measuring increased protein expression of ERG in the prostate cancer sample relative to a control representing ERG protein expression expected in a normal prostate sample;

measuring decreased PTEN in the prostate cancer sample relative to a control representing PTEN protein expression expected in a normal prostate sample;

determining that there is a higher risk that the prostate cancer has penetrated or will likely penetrate the prostatic capsule based on the ERG measuring and the PTEN measuring; and

administering a therapeutic agent for treating prostate cancer to the subject from which the prostate cancer sample was obtained, performing a prostatectomy on the subject from which the prostate cancer sample was obtained, or combinations thereof.

2. The method of claim 1 , wherein the prostate cancer sample is a prostate cancer sample that has not penetrated the prostatic capsule, and the method determines that the risk that the prostate cancer will penetrate the prostatic capsule in the future is at least four-times more likely when increased expression of ERG and decreased expression of PTEN is measured in the prostate cancer sample relative to the control.

3. The method of claim 1 , wherein it is not known whether the prostate cancer sample has penetrated the prostatic capsule prior to performing the method, and the method determines that the cancer has penetrated the prostatic capsule when increased expression of ERG and decreased expression of PTEN is measured in the prostate cancer sample relative to the control.

4. The method of claim 1 , further comprising:

measuring expression of one or more other prostate cancer-related molecules in the sample; and

comparing expression of the one or more other prostate cancer related molecules in the prostate cancer sample to a control representing expression of the one or more other prostate cancer-related molecules expected in a normal prostate sample.

5. The method of claim 1 , wherein the prostate cancer sample is a fixed, wax-embedded prostate cancer tissue sample.

6. The method of claim 1 , wherein the prostate cancer sample is collected after prostate cancer diagnosis and after prostatectomy in the subject.

7. The method of claim 1 , wherein the prostate cancer sample is collected from tissue removed during a prostatectomy.

8. The method of claim 1 , wherein the ERG-specific antibody is a rabbit monoclonal antibody produced from hybridoma clone EPR 3864 and the PTEN-specific antibody is a rabbit monoclonal antibody produced from hybridoma clone 138G6.

9. The method of claim 1 , further comprising generating a report, wherein the report comprises a risk that a prostate cancer will penetrate the prostatic capsule.

10. The method of claim 1 , wherein the therapeutic agent is radiation, a chemotherapeutic, or a hormone.

11. The method of claim 10 , wherein the chemotherapeutic comprises temozolomide or docetaxel.

Assignments (3)
CONFIRMATORY LICENSE Recorded Apr 6, 2017
From: UNIVERSITY OF ARIZONA
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 042171/0792 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 12, 2013
From: ALGOTAR, AMIT M.
To: THE ARIZONA BOARD OF REGENTS ON BEHALF OF THE UNIVERSITY OF ARIZONA
Reel/Frame 030209/0786 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 16, 2012
From: PESTANO, GARY; NAGLE, RAY B.; CORTEZ, CONNIE; VANPATTEN, KRISTIE A.
To: VENTANA MEDICAL SYSTEMS, INC.
Reel/Frame 029314/0548 →
Continuity (2)
Provisional Application 61529691 · Aug 31, 2011
Related Publication 20130196866A1 · Aug 1, 2013