IP Library › Granted Patent US 11,001,575
Granted Patent B1
US 11,001,575 · App. 16/541,863 · Granted May 11, 2021

Benzolactam compounds as protein kinase inhibitors

Inventors: Valerio Berdini (Cambridge, GB); Ildiko Maria Buck (London, GB); James Edward Harvey Day (Cambridge, GB); Charlotte Mary Griffiths-Jones (Cambridge, GB); Thomas Daniel Heightman (Harpenden, GB); Steven Howard (Cambridge, GB); Christopher William Murray (Cambridge, GB); David Norton (Cambridge, GB); Marc O'Reilly (Hereford, GB); Alison Jo-Anne Woolford (Cambridge, GB); Michael Liam Cooke (Nottingham, GB); David Cousin (Nottingham, GB); Stuart Thomas Onions (Nottingham, GB); Jonathan Martin Shannon (Nottingham, GB); John Paul Watts (Southwell, GB)
Assignee: OTSUKA PHARMACEUTICAL CO., LTD.
C07D405/14A61K31/444A61K31/506A61K31/5377A61K31/541A61K31/55A61K31/553A61P35/00C07D401/14C07D403/04C07D403/14C07D409/14C07D413/14C07D417/14C07D471/04C07D471/08C07D487/04C07D497/08C07D498/22C07D513/04
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Quick Facts
Patent No.
US 11,001,575
App. No.
16/541,863
Granted
May 11, 2021
Kind
B1
Abstract

The invention provides a compound of formula (0): or a pharmaceutically acceptable salt, N-oxide or tautomer thereof; wherein: n is 1 or 2; X is CH or N; Y is selected from CH and C—F; Z is selected from C—R z and N; R 1 is selected from: -(Alk 1 ) t -Cyc 1 ; wherein t is 0 or 1; Optionally substituted C 1-6 acyclic hydrocarbon groups R 2 is selected from hydrogen; halogen; and C 1-3 hydrocarbon groups optionally substituted with one or more fluorine atoms; R 3 is hydrogen or a group L-R 7 ; R 4 is selected from hydrogen; methoxy; and optionally substituted C 1-3 alkyl; and R 4a is selected from hydrogen and a C 1-3 alkyl group; wherein R z , Alk 1 , Cyc 1 , L 1 and R 7 are defined herein; provided that the compound is other than 6-benzyl-3-{2-[(2-methylpyrimidin-4-yl)amino]pyridin-4-yl}-7,8-dihydro-1,6-naphthyridin-5(6H)-one and 3-{2-[(2-methylpyrimidin-4-yl)amino]pyridin-4-yl}-7,8-dihydro-1,6-naphthyridin-5(6H)-one and salts and tautomers thereof. The compounds are inhibitors of ERK1/2 kinases and will be useful in the treatment of ERK1/2-mediated conditions. The compounds are therefore useful in therapy, in particular in the treatment of cancer.

Claims (103)

1. A pharmaceutical composition which is a unit dosage form comprising from approximately 1% (w/w) to approximately 95% active ingredient and from approximately 99% (w/w) to approximately 5% (w/w) of a pharmaceutically acceptable excipient or combination of excipients, wherein said active ingredient comprises a compound selected from:

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl]propanamide;

(2R)-2-(6-{5-Chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-(2-methoxypyridin-4-yl)ethyl]propanamide;

(R)-2-(6-(5-chloro-2-((2-methoxypyridin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl)propanamide;

(R)-2-(6-(5-chloro-2-((2-methylpyrimidin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(6-(dimethylamino)pyridin-2-yl)-2-hydroxyethyl)propanamide;

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-[6-(4-methylpiperazin-1-yl)pyridin-2-yl]ethyl]propanamide; and

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1R)-1-[3-fluoro-5-(4-methylpiperazin-1-yl)phenyl]ethyl]propanamide; and

pharmaceutically acceptable salts and tautomers thereof.

2. A pharmaceutical composition according to claim 1 wherein the unit dosage form comprises from 20% (w/w) to 90% active ingredient and from 80% (w/w) to 10% (w/w) of the pharmaceutically acceptable excipient or combination of excipients.

3. A method for the preparation of:

(i) a compound having the formula (2):

or a pharmaceutically acceptable salt or tautomer thereof; or

(ii) a compound having the formula (5):

or a pharmaceutically acceptable salt or tautomer thereof;

wherein

n is 1 or 2;

Z is selected from C—R z and N;

R z is selected from hydrogen; halogen; methoxy; and C 1-3 alkyl optionally substituted with hydroxy or methoxy;

R 1 is selected from:

-(Alk 1 ) t -Cyc 1 ; wherein t is 0 or 1; and Alk 1 is a C 1-4 straight chain or branched alkylene group optionally substituted with 1 or 2 hydroxy groups; and

C 1-6 acyclic hydrocarbon groups which are unsubstituted or substituted with 1, 2 or 3 substituents R 5 selected from hydroxy; oxo; fluorine; and cyano; and wherein 1 or 2 but not all of the carbon atoms of the hydrocarbon group can be replaced by O or N;

Cyc 1 is a cyclic group selected from (a) 3 to 9 membered non-aromatic monocyclic and bicyclic carbocyclic and heterocyclic groups containing 0, 1, 2, or 3 heteroatom ring members selected from O, N, S, S(O) and S(O) 2 ; (b) 5 to 6 membered monocyclic heteroaryl groups containing 1, 2 or 3 heteroatom ring members of which 1 is N and the others, when present, are selected from O, N and S; and (c) 3 to 7 membered monocyclic carbocyclic groups; wherein each cyclic group (a), (b) and (c) is unsubstituted or substituted with 1, 2 or 3 substituents R 6 selected from hydroxy; oxo; fluorine; amino; NH(Hyd 1 ); N(Hyd 1 ) 2 ; O-Hyd 1 ; —C(═O)-Hyd 1 ; —C(═O)—O-Hyd 1 and Hyd 1 ; where Hyd 1 is a C 1-4 non-aromatic hydrocarbon group optionally substituted with one or more substituents selected from fluorine, hydroxyl and methoxy;

R 2 is selected from hydrogen; halogen; and C 1-3 hydrocarbon groups optionally substituted with one or more fluorine atoms;

R 3 is hydrogen or a group L-R 7 ;

R 4 is selected from hydrogen; methoxy; and C 1-3 alkyl optionally substituted with hydroxy, amino, mono- or di-C 1-2 alkylamino, a cyclic amino group or methoxy; wherein the cyclic amino group is a saturated 4-7 membered heterocyclic group containing a nitrogen ring member and optionally a second heteroatom ring member selected from O, N and S, wherein the cyclic amino group is linked via a nitrogen ring member thereof to the C 1-3 alkyl, and wherein the cyclic amino group is optionally substituted with one or two methyl groups; provided that no more than one R 4 can be other than hydrogen or methyl;

L 1 is selected from a bond; Alk 2 , Alk 2 -O and Alk 2 -C(═O) wherein Alk 2 is a C 1-4 straight chain or branched alkylene group which is optionally substituted with one or more substituents selected from hydroxy, methoxy, amino, methylamino, dimethylamino and fluorine;

R 7 is selected from:

hydrogen;

CO 2 H;

NR 8 R 9 ;

a carbocyclic or heterocyclic group having from 3 to 12 ring members, of which 0, 1, 2 or 3 are heteroatom ring members selected from O, N and S and oxidised forms of S, the carbocyclic or heterocyclic group being optionally substituted with one or more substituents R 10 ; and

an acyclic C 1-8 hydrocarbon group optionally substituted with one or more substituents selected from hydroxy; oxo; halogen; cyano; carboxy; amino; mono- or di-C 1-4 alkylamino; and carbocyclic and heterocyclic groups having from 3 to 12 ring members, of which 0, 1, 2 or 3 are heteroatom ring members selected from O, N and S and oxidised forms of S, the carbocyclic or heterocyclic group being optionally substituted with one or more substituents R 10 ; wherein one or two but not all of the carbon atoms of the acyclic C 1-8 hydrocarbon group may optionally be replaced by O, S, SO, SO 2 or NR 11 ;

R 8 is selected from hydrogen and a C 1-4 hydrocarbon group, the C 1-4 hydrocarbon group being optionally substituted with 1-2 substituents selected from hydroxy, amino, mono-C 1-4 alkylamino, di-C 1-4 alkylamino, and 4-7 membered saturated heterocyclic rings containing 1-2 heteroatom ring members selected from O and N, wherein the mono-C 1-4 alkylamino, di-C 1-4 alkylamino, and 4-7 membered saturated heterocyclic rings are each optionally substituted with 1-2 hydroxy or C 1-3 alkyl substituents;

R 9 is selected from:

hydrogen;

a carbocyclic or heterocyclic group having from 3 to 12 ring members, of which 0, 1, 2 or 3 are heteroatom ring members selected from O, N and S and oxidised forms of S, the carbocyclic or heterocyclic group being optionally substituted with one or more substituents R 10 ; and

an acyclic C 1-8 hydrocarbon group optionally substituted with one or more substituents selected from hydroxy; oxo; halogen; cyano; carboxy; amino; mono- or di-C 1-4 alkylamino; and carbocyclic and heterocyclic groups having from 3 to 12 ring members, of which 0, 1, 2 or 3 are heteroatom ring members selected from O, N and S and oxidised forms of S, the carbocyclic or heterocyclic group being optionally substituted with one or more substituents R 10 ; wherein one or two but not all of the carbon atoms of the acyclic C 1-8 hydrocarbon group may optionally be replaced by O, S, SO, SO 2 or NR 11 ;

or NR 8 R 9 forms a heterocyclic group having from 4 to 12 ring members wherein, in addition to the nitrogen atom of NR 8 R 9 , the heterocyclic group optionally contains 1 or 2 further heteroatom ring members selected from O, N and S and oxidised forms of S; and wherein the heterocyclic group is optionally substituted with one or more substituents R 10 ;

R 10 is selected from:

halogen; hydroxy; oxo; cyano;

OR 12 wherein R 12 is C 1-6 alkyl or C 3-6 cycloalkyl, each being optionally substituted with halogen;

an acyclic C 1-8 hydrocarbon group optionally substituted with one or more substituents selected from hydroxy; oxo; halogen; cyano; carboxy; amino; mono- or di-C 1-4 alkylamino; and carbocyclic and heterocyclic groups having 3 to 7 ring members of which 0, 1, 2, 3 or 4 are heteroatom ring members selected from N, O and S, wherein the carbocyclic and heterocyclic groups are optionally substituted with one or more substituents R 13 selected from hydroxy; halogen; cyano; amino; —NH(Hyd 1 ); —N(Hyd 1 ) 2 ; and —(O) v -Hyd 1 where v is 0 or 1; wherein one or two but not all of the carbon atoms of the acyclic C 1-8 hydrocarbon group may optionally be replaced by O, S, SO, SO 2 or NR 11 ; and

carbocyclic and heterocyclic groups having 3 to 7 ring members of which 0, 1, 2, 3 or 4 are heteroatom ring members selected from N, O and S, wherein the carbocyclic and heterocyclic groups are optionally substituted with one or more substituents R 13 ; and

R 11 is selected from hydrogen and a C 1-4 hydrocarbon group,

which method comprises:

(a) (i) reacting a compound of formula (II):

wherein R 4a is hydrogen, X is N, and Y is CH,

with a compound of formula HNR 8 R 9 under amide forming conditions; or

(ii) reacting a compound of formula (III):

wherein R 4a is hydrogen, and Y is CH,

with a compound of formula (IV):

wherein X is N, and Hal is a suitable leaving group,

in the presence of a palladium catalyst; or

(iii) reacting a compound of formula (V):

wherein R 4a is hydrogen, X is N, Y is CH, and Hal is a suitable leaving group,

with a compound of formula R 1 NH 2 ; or

(iv) reacting a compound of formula (VI):

wherein R 4a is hydrogen, X is N, and Y is CH,

with a compound of formula R 7 L 1 -J, wherein J is a suitable leaving group; and/or

(b) deprotecting a protected form of a compound of formulae (2) or (5); and/or

(c) interconverting a compound of formulae (2) or (5) or protected form thereof to a further compound of formulae (2), (5), or protected form thereof; and

(d) optionally forming a pharmaceutically acceptable salt of a compound of formulae (2) or (5).

4. The method of claim 3 wherein R 1 is a group AA:

5. The method of claim 3 wherein R 2 is chlorine.

6. The method of claim 3 wherein Z is C—R z where R is hydrogen.

7. The method of claim 3 wherein R 4 is hydrogen and R 4a when present is also hydrogen.

8. The method of claim 3 wherein R 3 is L 1 -R 7 wherein L 1 is Alk 2 or Alk 2 -C(═O).

9. The method of claim 8 wherein Alk 2 is CH(CH 3 ).

10. The method of claim 9 wherein R 7 is an acyclic C 1-8 hydrocarbon group optionally substituted with one or more substituents selected from hydroxy; oxo; halogen; cyano; carboxy; amino; mono- or di-C 1-4 alkylamino; and carbocyclic and heterocyclic groups having from 3 to 12 ring members, of which 0, 1, 2 or 3 are heteroatom ring members selected from O, N and S and oxidised forms of S, the carbocyclic or heterocyclic group being optionally substituted with one or more substituents R 10 ; wherein one or two but not all of the carbon atoms of the acyclic C 1-8 hydrocarbon group may optionally be replaced by O, S, SO, SO 2 or NR 11 .

11. The method of claim 3 wherein process (a)(i) comprises reacting the compound of formula (II) with the compound of formula HNR 8 R 9 in the presence of an amide coupling agent selected from HATU, TBTU, HBTU, and 1-propanephosphonic anhydride.

12. The method of claim 3 wherein process (a)(ii) comprises reacting the compound of formula (III) with the compound of formula (IV) in the presence of the palladium catalyst and a base in a solvent.

13. The method of claim 3 wherein:

in formula (IV), Hal is a halide; and

in formula (V), Hal is a halide.

14. The method of claim 13 wherein:

in formula (IV), Hal is chloro; and

in formula (V), Hal is chloro.

15. The method of claim 3 for the preparation of a compound selected from:

(a) a compound having the formula (6):

or a pharmaceutically acceptable salt or tautomer thereof;

(b) a compound having the formula (7):

or a pharmaceutically acceptable salt or tautomer thereof, wherein v is 0, 1, 2 or 3; and

(c) a compound having the formula (8):

or a pharmaceutically acceptable salt or tautomer thereof.

16. The method of claim 15 wherein said method comprises the process (a)(ii), which comprises reacting the compound of formula (III) with the compound of formula (IV) in the presence of the palladium catalyst and a base in a solvent.

17. The method of claim 3 for the preparation of a compound wherein n is 1, said compound having the formula (3):

or a pharmaceutically acceptable salt or tautomer thereof.

18. The method of claim 3 for the preparation of a compound selected from:

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl]propanamide;

(2R)-2-(6-{5-Chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-(2-methoxypyridin-4-yl)ethyl]propanamide;

(R)-2-(6-(5-chloro-2-((2-methoxypyridin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl)propanamide;

(R)-2-(6-(5-chloro-2-((2-methylpyrimidin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(6-(dimethylamino)pyridin-2-yl)-2-hydroxyethyl)propanamide;

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-[6-(4-methylpiperazin-1-yl)pyridin-2-yl]ethyl]propanamide; and

(2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1R)-1-[3-fluoro-5-(4-methylpiperazin-1-yl)phenyl]ethyl]propanamide; and

pharmaceutically acceptable salts thereof.

19. The method of claim 18 for the preparation of (2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl]propanamide or a pharmaceutically acceptable salt thereof.

20. The method of claim 18 for the preparation of (2R)-2-(6-{5-Chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-(2-methoxypyridin-4-yl)ethyl]propanamide or a pharmaceutically acceptable salt thereof.

21. The method of claim 18 for the preparation of (R)-2-(6-(5-chloro-2-((2-methoxypyridin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(3-fluoro-5-methoxyphenyl)-2-hydroxyethyl)propanamide or a pharmaceutically acceptable salt thereof.

22. The method of claim 18 for the preparation of (R)-2-(6-(5-chloro-2-((2-methylpyrimidin-4-yl)amino)pyrimidin-4-yl)-1-oxoisoindolin-2-yl)-N—((S)-1-(6-(dimethylamino)pyridin-2-yl)-2-hydroxyethyl)propanamide or a pharmaceutically acceptable salt thereof.

23. The method of claim 18 for the preparation of (2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1S)-2-hydroxy-1-[6-(4-methylpiperazin-1-yl)pyridin-2-yl]ethyl]propanamide or a pharmaceutically acceptable salt thereof.

24. The method of claim 18 for the preparation of (2R)-2-(6-{5-chloro-2-[(oxan-4-yl)amino]pyrimidin-4-yl}-1-oxo-2,3-dihydro-1H-isoindol-2-yl)-N-[(1R)-1-[3-fluoro-5-(4-methylpiperazin-1-yl)phenyl]ethyl]propanamide or a pharmaceutically acceptable salt thereof.

25. A compound selected from:

26. A compound according to claim 25 selected from:

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2019
From: ASTEX THERAPEUTICS LIMITED
To: OTSUKA PHARMACEUTICAL CO., LTD
Reel/Frame 050076/0927 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2019
From: SYGNATURE DISCOVERY LIMITED
To: ASTEX THERAPEUTICS LIMITED
Reel/Frame 050076/0914 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2019
From: COOKE, MICHAEL LIAM; COUSIN, DAVID; ONIONS, STUART THOMAS; SHANNON, JONATHAN MARTIN; WATTS, JOHN PAUL
To: SYGNATURE DISCOVERY LIMITED
Reel/Frame 050076/0879 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 16, 2019
From: BERDINI, VALERIO; BUCK, ILDIKO MARIA; DAY, JAMES EDWARD HARVEY; GRIFFITHS-JONES, CHARLOTTE MARY; HEIGHTMAN, THOMAS DANIEL; HOWARD, STEVEN; MURRAY, CHRISTOPHER WILLIAM; NORTON, DAVID; O'REILLY, MARC; WOOLFORD, ALISON JO-ANNE
To: ASTEX THERAPEUTICS LIMITED
Reel/Frame 050076/0865 →
Priority Claims (2)
GB 1518676.0 · Oct 21, 2015 · national
GB 1611351.6 · Jun 30, 2016 · national
Continuity (1)
Continuation 15767775
Cited By (2)
US 12,655,137 US 12,715,871