IP Library Granted Patent US 11,203,613
Granted Patent B2
US 11,203,613 · App. 16/755,427 · Granted Dec 21, 2021

Peptidomimetic proteasome inhibitors

Inventors: Gang Lin (Forest Hills, NY); Carl Nathan (Larchmont, NY); Wenhu Zhan (Elmhurst, NY); Trevor Morgan (Royston, GB); Ryoma Hara (Tokyo, JP); Toshihiro Imaeda (Kanagawa, JP); Rei Okamoto (Kanagawa, JP); Kenjiro Sato (Kanagawa, JP); Kazuyoshi Aso (Kanagawa, JP); Tzu-Tshin Wong (Acton, MA); Michael A. Foley (New York, NY)
C07K5/06026C07D235/10C07D235/14C07K5/02A61K38/00
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Quick Facts
Patent No.
US 11,203,613
App. No.
16/755,427
Granted
Dec 21, 2021
Kind
B2
Abstract

The compounds of the present invention are represented by the following compounds having Formula (I) and Formula (I′): where the substituents R, R 1 , R 3 R 4 , R′, W, X, Y, Z, k, and m are as defined herein and where the substituents R, R 1 , R 2 , R 3 , R 4 , X, Y, Z, and m are as defined herein. These compounds are used in the treatment of bacterial infections, parasite infections, fungal infections, cancer, immunologic disorders, autoimmune disorders, neurodegenerative diseases and disorders, inflammatory disorders, or muscular dystrophy or for providing immunosuppression for transplanted organs or tissues.

Claims (119)

1. A compound of Formula (I):

wherein

R is H or C 1-6 alkyl;

R′ is H or C 1-6 alkyl;

R 1 is H or C 1-6 alkyl;

or R and R 1 are taken together with the carbon to which they are attached to form a C 3-8 cycloalkyl ring;

R 2 is independently selected at each occurrence thereof from

or —(CH 2 ) n C(O)NR 6 R 7 ;

R 3 is independently selected at each occurrence thereof from the group consisting of H, C 1-12 alkyl, —Boc, —C(O)(CH 2 ) n R 5 , —(CH 2 ) n C(O)R 5 , —C(O)OR 5 , —C(O)(CH 2 ) n NR 6 R 7 , —S(O) 2 R 5 , monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with R 8 ;

R 4 is H, halogen, NH 2 , NHCOOC 1-12 alkyl, or C 1-12 alkyl;

R 5 is selected from the group consisting of C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with R 8 ;

R 6 , R 7 are each independently selected from the group consisting of H, C 1-6 alkyl, and arylalkyl;

or R 6 and R 7 are taken together with the nitrogen to which they are attached to form a piperidine, pyrrolidine, azepane, or morpholine ring, wherein piperidine, pyrrolidine, azepane, or morpholine ring can be optionally substituted 1 to 3 times with R 9 ;

R 8 is selected independently at each occurrence thereof from the group consisting of halogen, C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl, wherein C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl can be optionally substituted 1 to 3 times with R 9 ;

R 9 is selected from the group consisting of H, halogen, C 1-6 alkyl, C 3-8 cycloalkyl, and aryl, wherein C 1-6 alkyl can be optionally substituted 1 to 3 times with halogen;

R 10 is H or arylalkyl;

W is CHR 2 , NR 2 , or

X is selected from the group consisting of —C(O)—NH—, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle;

Y is optional and, if present, is —(CH 2 ) m —;

Z is optional and, if present, is aryl or bicyclic heteroaryl;

is the point of attachment to NHR 3 moiety;

is the point of attachment to C(O) moiety;

k is 1 or 2;

m is 0, 1, or 2; and

n is 0, 1, 2, 3, or 4,

with the proviso that R 2 is not —CH 2 C(O)NH 2 , —CH 2 C(O)NHCH 2 C(CH 3 ) 3 , or —(CH 2 ) 2 C(O)NH 2 ,

or an oxide thereof, a pharmaceutically acceptable salt thereof, a solvate thereof, or a prodrug thereof.

2. The compound according to claim 1 which has the Formula (IA), Formula (TB), or Formula (IC):

3. The compound according to claim 1 , wherein R and R 1 are taken together with the carbon to which they are attached to form

group, and wherein

is the point of attachment to NH; and

is the point of attachment to X.

4. The compound according to claim 1 , wherein R 3 is

wherein

is the point of attachment to the corresponding carbon atom of the structure of Formula (I).

5. The compound according to claim 1 , wherein R 4 is NH 2 or NHBoc.

6. The compound according to claim 1 , wherein X is

wherein

is the point of attachment to C(R 1 )(R 2 ) moiety;

is the point of attachment to Y, Z, or R 4 .

7. The compound according to claim 1 , wherein Z is

and

wherein

is the point of attachment to Y or X;

is the point of attachment to R 4 .

8. The compound according to claim 1 , wherein the compound of Formula (I) is selected from the group consisting of:

9. The compound according to claim 1 which has the Formula

wherein

R is H or C 1-6 alkyl;

R 1 is H or C 1-6 alkyl;

or R and R 1 are taken together with the carbon to which they are attached to form a C 3-8 cycloalkyl ring;

R 2 is independently selected at each occurrence thereof from the group consisting of C 1-6 alkyl, and —(CH 2 ) n C(O)NR 6 R 7 , wherein C 1-6 alkyl can be optionally substituted from 1 to 3 times with a substituent selected independently at each occurrence thereof from OH or C(O)OR 10 ;

R 3 is independently selected at each occurrence thereof from the group consisting of H, —Boc, —C(O)(CH 2 ) n R 5 , —(CH 2 ) n C(O)R 5 , —C(O)OR 5 , —C(O)(CH 2 ) n NR 6 R 7 , —S(O) 2 R 5 , monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with C 1-6 alkyl;

R 4 is H, C 1-12 alkyl, or halogen;

R 5 is selected from the group consisting of C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with R 8 ;

R 6 , R 7 are each independently selected from the group consisting of H, C 1-6 alkyl, and arylalkyl;

or R 6 and R 7 are taken together with the nitrogen to which they are attached to form a piperidine, pyrrolidine, azepane, or morpholine ring, wherein piperidine, pyrrolidine, azepane, or morpholine ring can be optionally substituted 1 to 3 times with R 9 ;

R 8 is selected independently at each occurrence thereof from the group consisting of halogen, C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl, wherein C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl can be optionally substituted 1 to 3 times with R 9 ;

R 9 is selected from the group consisting of H, halogen, C 1-6 alkyl, C 3-8 cycloalkyl, and aryl, wherein C 1-6 alkyl can be optionally substituted 1 to 3 times with halogen;

R 10 is H or arylalkyl;

X is monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, or monocyclic and bicyclic non-aromatic heterocycle;

Y is optional and, if present, is —(CH 2 ) m —;

Z is optional and, if present, is aryl;

m is 0, 1, or 2; and

n is 0, 1, 2, 3, or 4;

or an oxide thereof, a pharmaceutically acceptable salt thereof, a solvate thereof, or a prodrug thereof.

10. The compound according to claim 9 which has the Formula (I′A), Formula (PB), Formula (I′C), Formula (I'D), Formula (I′E), Formula (I′F), Formula (I′G), Formula (I′C′), Formula (I'D′), Formula (I′E′), Formula (I′F′), or Formula (I′G′):

or

wherein

A is NH, N, O, or S,

is a single or a double bond; and

B is NH, N, O, or S.

11. The compound according to claim 1 , wherein R 1 is H or Me.

12. The compound according to claim 1 , wherein R and R 1 are taken together with the carbon to which they are attached to form

group, and wherein

is the point of attachment to NH; and

is the point of attachment to X.

13. The compound according to claim 1 , wherein R 2 is selected from the group consisting of

wherein

is the point of attachment to the corresponding carbon atom of the structure of Formula (I).

14. The compound according to claim 1 , wherein R 3 is selected from the group consisting of H, Boc,

wherein

is the point of attachment to the corresponding carbon atom of the structure of Formula (I).

15. The compound according to claim 1 , wherein R 4 is H, Me, or F.

16. The compound according to claim 1 , wherein X is selected from the group consisting of

wherein

is the point of attachment to C(R 1 )(R 2 ) moiety;

is the point of attachment to Y, Z, or R 4 .

17. The compound according to claim 1 , wherein Y is —CH 2 —.

18. The compound according to claim 1 , wherein Z is

and

wherein

is the point of attachment to Y or X;

is the point of attachment to R 4 .

19. The compound according to claim 1 , wherein the compound of Formula (I′) is selected from the group consisting of:

20. A compound of Formula:

or an oxide thereof, a pharmaceutically acceptable salt thereof, a solvate thereof, or a prodrug thereof.

21. A compound of Formula (II):

wherein

R is H or C 1-6 alkyl;

R 1 is H or C 1-6 alkyl;

or R and R 1 are taken together with the carbon to which they are attached to form a C 3-8 cycloalkyl ring;

R 2 is independently selected at each occurrence thereof from the group consisting of C 1-6 alkyl, and —(CH 2 ) n C(O)NR 6 R 7 , wherein C 1-6 alkyl can be optionally substituted from 1 to 3 times with a substituent selected independently at each occurrence thereof from OH or C(O)OR 10 ;

R 3 is independently selected at each occurrence thereof from the group consisting of H, —Boc, —C(O)(CH 2 ) n R 5 , —(CH 2 )—C(O)R 5 , —C(O)OR 5 , —C(O)(CH 2 )—NR 6 R 7 , —S(O) 2 R 5 , monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with C 1-6 alkyl;

R 4 is H, C 1-12 alkyl, or halogen;

R 5 is selected from the group consisting of C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle, wherein C 1-12 alkyl, monocyclic or bicyclic C 3-10 cycloalkyl, C 3-12 cycloalkylalkyl, C 1-12 alkoxy, monocyclic and bicyclic aryl, monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, and monocyclic and bicyclic non-aromatic heterocycle can be optionally substituted from 1 to 3 times with R 8 ;

R 6 , R 7 are each independently selected from the group consisting of H, C 1-6 alkyl, and arylalkyl;

or R 6 and R 7 are taken together with the nitrogen to which they are attached to form a piperidine, pyrrolidine, azepane, or morpholine ring, wherein piperidine, pyrrolidine, azepane, or morpholine ring can be optionally substituted 1 to 3 times with R 9 ;

R 8 is selected independently at each occurrence thereof from the group consisting of halogen, C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl, wherein C 1-6 alkyl, C 3-8 cycloalkyl, aryl, and arylalkyl can be optionally substituted 1 to 3 times with R 9 ;

R 9 is selected from the group consisting of H, halogen, C 1-6 alkyl, C 3-8 cycloalkyl, and aryl, wherein C 1-6 alkyl can be optionally substituted 1 to 3 times with halogen;

R 10 is H or arylalkyl;

X is monocyclic and bicyclic heteroaryl, monocyclic and bicyclic heterocyclyl, or monocyclic and bicyclic non-aromatic heterocycle;

Y is optional and, if present, is —(CH 2 ) m —;

Z is optional and, if present, is aryl;

W is N or CH;

m is 0, 1, or 2; and

n is 0, 1, 2, 3, or 4;

or an oxide thereof, a pharmaceutically acceptable salt thereof, a solvate thereof, or a prodrug thereof.

22. A pharmaceutical composition comprising a therapeutically effective amount of the compound according to claim 1 and a pharmaceutically acceptable carrier.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 9, 2021
From: LIN, GANG; NATHAN, CARL; ZHAN, WENHU
To: CORNELL RESEARCH FOUNDATION
Reel/Frame 056806/0736 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 9, 2021
From: MORGAN, TREVOR
To: CYCLOFLUIDIC LTD
Reel/Frame 056806/0957 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 9, 2021
From: CYCLOFLUIDIC LTD
To: CORNELL UNIVERSITY
Reel/Frame 056807/0033 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 9, 2021
From: HARA, RYOMA; IMAEDA, TOSHIHIRO; OKAMOTO, REI; SATO, KENJIRO; ASO, KAZUYOSHI; WONG, TSU-TSHIN; FOLEY, MICHAEL A.
To: TRI-INSTITUTIONAL THERAPEUTICS DISCOVERY INSTITUTE
Reel/Frame 056816/0001 →
Continuity (2)
Provisional Application 62571146 · Oct 11, 2017
Related Publication 20200317729A1 · Oct 8, 2020