Tumor-selective CTLA-4 antagonists
Provided herein are recombinant masking proteins and recombinant ligand proteins useful in treating cancer, neurodegenerative disease, and cardiovascular disease. The recombinant masking proteins provided herein may, inter alia, be used as non-covalent masks of antagonists of, for example, cellular growth factors (e.g., TNF) or cell surface proteins (e.g., CTLA-4).
1. A recombinant masking protein comprising two identical masking protein domains, each of said masking protein domains comprising: (i) a masking dimerizing domain, wherein the masking dimerizing domain is an Fc protein domain;
(ii) a ligand-masking binding domain comprising a human CTLA 4 polypeptide that binds to lipocalin 2, ipilimumab, or tremelimumab;
and
(iii) a cleavable masking linker comprising a tumor associated protease cleavage site connecting said ligand-masking binding domain to said masking dimerizing domain, wherein said masking protein domains are bound together.
2. The recombinant masking protein of claim 1 , wherein the human CTLA 4 polypeptide comprises an amino acid sequence selected from SEQ ID NOs 1-10, or a sequence having at least 90% identity to a sequence of SEQ ID NOs 1-10.
3. The recombinant masking protein of claim 1 , wherein said protease cleavage site is a matrix metalloprotease cleavage site, a disintegrin and metalloproteinase domain-containing (ADAM) metalloprotease cleavage site or a prostate specific antigen (PSA) protease cleavage site.
4. The recombinant masking protein of claim 1 , wherein said recombinant masking protein is bound to a recombinant ligand protein comprising two identical ligand protein domains, each of said ligand protein domains comprising:
(i) a ligand dimerizing domain, wherein the ligand dimerizing domain is an Fc protein domain;
(ii) a ligand domain comprising a T cell receptor binding domain selected from a lipocalin 2 polypeptide or an anti-CTLA4 antibody directed against human CTLA4; bound to one of said ligand-masking domains; and
(iii) a ligand linker comprising a tumor associated protease cleavage site connecting said ligand domain to said ligand dimerizing domain, wherein said ligand protein domains are bound together.
5. The recombinant masking protein of claim 4 , wherein said ligand domain is a lipocalin 2 polypeptide comprising SEQ ID NO: 15 or a sequence having at least 90% identity to a sequence of SEQ ID NO: 15.
6. The recombinant masking protein of claim 4 , wherein said ligand domain is an ipilimumab antibody, a tremelimumab antibody, or a CTLA4 binding fragment thereof.
7. A method of treating a cancer in a subject in need thereof, said method comprising administering to the subject a therapeutically effective amount of a recombinant masking protein comprising two identical masking protein domains, each of said masking protein domains comprising:
(i) a masking dimerizing domain, wherein the masking dimerizing domain is an Fc protein domain;
(ii) a ligand-masking binding domain comprising a human CTLA-4 polypeptide that binds to lipocalin 2, ipilimumab, or tremelimumab; and
(iii) a cleavable masking linker comprising a tumor associated protease cleavage site connecting said ligand-masking binding domain to said masking dimerizing domain, wherein said masking protein domains are bound together; and a recombinant ligand protein comprising two identical ligand protein domains, each of said ligand protein domains comprising:
(i) a ligand dimerizing domain, wherein the ligand dimerizing domain is an Fc protein domain;
(ii) a ligand domain comprising a T cell receptor binding domain selected from a lipocalin 2 polypeptide or an anti-CTLA4 antibody directed against human CTLA4; and
(iii) a ligand linker comprising a tumor associated protease cleavage site connecting said ligand domain to said ligand dimerizing domain, wherein said ligand protein domains are bound together.
8. The method of claim 7 , wherein said cancer is prostate cancer.
9. A pharmaceutical composition comprising a pharmaceutically acceptable excipient and a recombinant masking protein comprising two identical masking protein domains, each of said masking protein domains comprising:
(i) a masking dimerizing domain, wherein the masking dimerizing domain is an Fc protein domain;
(ii) a ligand-masking binding domain comprising a human CTLA 4 polypeptide that binds to lipocalin 2, ipilimumab, or tremelimumab; and
(iii) a cleavable masking linker comprising a tumor associated protease cleavage site connecting said ligand-masking binding domain to said masking dimerizing domain, wherein said masking protein domains are bound together; and a recombinant ligand protein comprising two identical ligand protein domains, each of said ligand protein domains comprising:
(i) a ligand dimerizing domain, wherein the ligand dimerizing domain is an Fc protein domain;
(ii) a ligand domain comprising a T cell receptor binding domain selected from a lipocalin 2 polypeptide or an anti-CTLA4 antibody directed against human CTLA4; and
(iii) a ligand linker comprising a tumor associated protease cleavage site connecting said ligand domain to said ligand dimerizing domain, wherein said ligand protein domains are bound together.
10. The recombinant masking protein of claim 4 , wherein said ligand domain is a lipocalin 2 polypeptide consisting of SEQ ID NO: 15 or a sequence having at least 90% identity to a sequence of SEQ ID NO: 15.