Isolated darobactin A analog compounds and compositions thereof
Embodiments of the present invention relate to a novel compound of Formula (I) or stereoisomer, a tautomer, or a pharmaceutically acceptable salt thereof, for use in treatment of infection caused by Gram-negative bacteria.
1. A compound of Formula (I):
and/or a pharmaceutically acceptable salt, stereoisomer, tautomer, or hydrate thereof, wherein:
R 1 , R 2 , R 3 , R 4 , R 5 , and R 6 are each independently selected from the group consisting of hydrogen, alkyl, alkenyl, alkynyl, hydroxyl, hydroxyalkyl, halogen, —CN, —O-alkyl, —C(O)-alkyl, —C(O)O-alkyl, —C(O)OH, —C(O)NH 2 , —C(O)NH-alkyl, —NH 2 , —NO 2 , —CF 3 , —NH-alkyl, —N-(alkyl) 2 , —NHC(O)-alkyl and aryl, wherein said alkyl, alkenyl, alkynyl and aryl are each optionally substituted;
R 7 and R 8 are each independently selected from the group consisting of hydrogen, straight or branched C1-C5 alkyl, straight or branched C2-C6 alkenyl, straight or branched C2-C6 alkynyl; wherein said alkyl, alkenyl and alkynyl are each optionally substituted;
R 9 , R 10 , R 11 , R 12 , R 13 , R 14 , R 15 , R 16 , R 17 , R 18 , R 19 and R 20 are each independently selected from the group consisting of hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, cycloalkenyl, heterocycloalkyl, heterocycloalkenyl, aryl, heteroaryl, haloalkyl, hydroxyl, hydroxyalkyl, halogen, —CN, —O-alkyl, —C(O)-alkyl, —C(O)O-alkyl, —C(O)OH, —C(O)N H 2 , —C(O)NH-alkyl, —NH 2 , —NO 2 , —CF 3 , —NH-alkyl, —NHC(O)-alkyl, wherein said alkyl, alkenyl, alkynyl, cycloalkyl cycloalkenyl, heterocycloalkyl, heterocycloalkenyl, aryl, heteroaryl, haloalkyl are each optionally substituted; A is a bond or —(CH 2 ) n —, wherein n is an integer between 0 and 10; and X is —C(O)—, —CH 2 —, —C(OH)—, —C(O)O-alkyl, —C((O)alkyl)-, with the provision that the compound of formula (I) is isolated in a substantially pure form from a microorganism; is encoded by a darA gene comprising at least one non-natural nucleotide substitution; and is neither naturally occurring nor the compound of formula (II):
2. A pharmaceutical composition for treating infections in an animal caused by Gram-negative bacteria, comprising a therapeutically effective amount of the compound according to claim 1 or a pharmaceutically acceptable salt thereof.
3. The pharmaceutical composition according to claim 2 , further comprising at least one pharmaceutically acceptable carrier, excipient or diluent.
4. The pharmaceutical composition according to claim 2 , in a form of topical administration, systemic administration, parenteral administration, subcutaneous administration, or transdermal administration, rectal administration, oral administration, intravaginal administration, intranasal administration, intrabronchial administration, intraocular administration, intra-aural administration, intravenous administration, intramuscular administration, or intraperitoneal administration.
5. The pharmaceutical composition according to claim 2 , further comprising at least one additional therapeutic agent.
6. The pharmaceutical composition according to claim 2 , obtained by culturing a microorganism having an ability to produce the compound in a nutrient medium.
7. The pharmaceutical composition according to claim 6 , wherein the microorganism is Photorhabdus khanii DSM 3369.